RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 PDHA1P08559 390 aa13.83□□□□□ -0.2
VARS-227ENST00000489979 GNLYP22749 145 aa13.83□□□□□ -0.2
VARS-227ENST00000489979 MIPP30301 263 aa13.83□□□□□ -0.2
VARS-227ENST00000489979 HCAR3P49019 387 aa13.83□□□□□ -0.2
VARS-227ENST00000489979 EPHA4P54764 986 aa13.83□□□□□ -0.2
VARS-227ENST00000489979 GFERP55789 205 aa13.83□□□□□ -0.2
VARS-227ENST00000489979 ESPL1Q14674 2120 aa13.83□□□□□ -0.2
VARS-227ENST00000489979 RALGPS1Q5JS13 557 aa13.83□□□□□ -0.2
VARS-227ENST00000489979 CAPRIN2Q6IMN6 1127 aaKnown RBP13.83□□□□□ -0.2
VARS-227ENST00000489979 CYP4V2Q6ZWL3 525 aaPredicted RBP13.83□□□□□ -0.2
VARS-227ENST00000489979 ZNF765Q7L2R6 523 aa13.83□□□□□ -0.2
VARS-227ENST00000489979 TMEM135Q86UB9 458 aa13.83□□□□□ -0.2
VARS-227ENST00000489979 NLRP8Q86W28 1048 aa13.83□□□□□ -0.2
VARS-227ENST00000489979 BBS5Q8N3I7 341 aa13.83□□□□□ -0.2
VARS-227ENST00000489979 GALNT6Q8NCL4 622 aa13.83□□□□□ -0.2
VARS-227ENST00000489979 PCMTD1Q96MG8 357 aaPredicted RBP13.83□□□□□ -0.2
VARS-227ENST00000489979 HERPUD2Q9BSE4 406 aa13.83□□□□□ -0.2
VARS-227ENST00000489979 RIOK2Q9BVS4 552 aaKnown RBP13.83□□□□□ -0.2
VARS-227ENST00000489979 ETNK2Q9NVF9 386 aa13.83□□□□□ -0.2
VARS-227ENST00000489979 TAS2R14Q9NYV8 317 aa13.83□□□□□ -0.2
VARS-227ENST00000489979 CNOT8Q9UFF9 292 aaKnown RBP13.83□□□□□ -0.2
VARS-227ENST00000489979 TLK1Q9UKI8 766 aa13.83□□□□□ -0.2
VARS-227ENST00000489979 VPS4AQ9UN37 437 aa13.83□□□□□ -0.2
VARS-227ENST00000489979 OAS3Q9Y6K5 1087 aaKnown RBP13.83□□□□□ -0.2
VARS-227ENST00000489979 CDC14CA4D256 554 aa13.82□□□□□ -0.2
VARS-227ENST00000489979 A6NCN8 305 aa13.82□□□□□ -0.2
VARS-227ENST00000489979 TTLL8A6PVC2 850 aa13.82□□□□□ -0.2
VARS-227ENST00000489979 ATMINO43313 823 aaPredicted RBP13.82□□□□□ -0.2
VARS-227ENST00000489979 MAFKO60675 156 aa13.82□□□□□ -0.2
VARS-227ENST00000489979 RNF8O76064 485 aa13.82□□□□□ -0.2
VARS-227ENST00000489979 PDGFAP04085 211 aa13.82□□□□□ -0.2
VARS-227ENST00000489979 ATP1A1P05023 1023 aaKnown RBP13.82□□□□□ -0.2
VARS-227ENST00000489979 TPM2P07951 284 aa13.82□□□□□ -0.2
VARS-227ENST00000489979 ANKRD34CP0C6C1 535 aa13.82□□□□□ -0.2
VARS-227ENST00000489979 ACP5P13686 325 aa13.82□□□□□ -0.2
VARS-227ENST00000489979 AMPD1P23109 780 aa13.82□□□□□ -0.2
VARS-227ENST00000489979 MMP13P45452 471 aa13.82□□□□□ -0.2
VARS-227ENST00000489979 LYSMD3Q7Z3D4 306 aa13.82□□□□□ -0.2
VARS-227ENST00000489979 PLXDC1Q8IUK5 500 aa13.82□□□□□ -0.2
VARS-227ENST00000489979 PSTKQ8IV42 348 aaKnown RBP13.82□□□□□ -0.2
VARS-227ENST00000489979 NDUFAF2Q8N183 169 aa13.82□□□□□ -0.2
VARS-227ENST00000489979 EFCAB3Q8N7B9 438 aa13.82□□□□□ -0.2
VARS-227ENST00000489979 NEK11Q8NG66 645 aa13.82□□□□□ -0.2
VARS-227ENST00000489979 EXD1Q8NHP7 514 aa13.82□□□□□ -0.2
VARS-227ENST00000489979 NSMCE1Q8WV22 266 aa13.82□□□□□ -0.2
VARS-227ENST00000489979 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.82□□□□□ -0.2
VARS-227ENST00000489979 EPB41L1Q9H4G0 881 aa13.82□□□□□ -0.2
VARS-227ENST00000489979 ZWILCHQ9H900 591 aa13.82□□□□□ -0.2
VARS-227ENST00000489979 PARVAQ9NVD7 372 aa13.82□□□□□ -0.2
VARS-227ENST00000489979 CPNE7Q9UBL6 633 aa13.82□□□□□ -0.2
VARS-227ENST00000489979 GTF3C3Q9Y5Q9 886 aa13.82□□□□□ -0.2
VARS-227ENST00000489979 MN1Q10571 1320 aaPredicted RBP13.82□□□□□ -0.2
VARS-227ENST00000489979 A0A0J9YYE9 177 aa13.81□□□□□ -0.2
VARS-227ENST00000489979 TMCO5BA8MYB1 307 aa13.81□□□□□ -0.2
VARS-227ENST00000489979 FZD6O60353 706 aa13.81□□□□□ -0.2
VARS-227ENST00000489979 KIAA0754O94854 1291 aa13.81□□□□□ -0.2
VARS-227ENST00000489979 TRBC1P01850 177 aa13.81□□□□□ -0.2
VARS-227ENST00000489979 F3P13726 295 aa13.81□□□□□ -0.2
VARS-227ENST00000489979 SLC2A4P14672 509 aa13.81□□□□□ -0.2
VARS-227ENST00000489979 ZNF30P17039 623 aa13.81□□□□□ -0.2
VARS-227ENST00000489979 SEPHS1P49903 392 aa13.81□□□□□ -0.2
VARS-227ENST00000489979 ZNF135P52742 658 aaPredicted RBP13.81□□□□□ -0.2
VARS-227ENST00000489979 STC1P52823 247 aa13.81□□□□□ -0.2
VARS-227ENST00000489979 PMS2P54278 862 aa13.81□□□□□ -0.2
VARS-227ENST00000489979 SH3BP2P78314 561 aa13.81□□□□□ -0.2
VARS-227ENST00000489979 MARC1Q5VT66 337 aa13.81□□□□□ -0.2
VARS-227ENST00000489979 CDKAL1Q5VV42 579 aa13.81□□□□□ -0.2
VARS-227ENST00000489979 PLEKHA7Q6IQ23 1121 aa13.81□□□□□ -0.2
VARS-227ENST00000489979 ATPAF2Q8N5M1 289 aa13.81□□□□□ -0.2
VARS-227ENST00000489979 GALNT11Q8NCW6 608 aa13.81□□□□□ -0.2
VARS-227ENST00000489979 ENOX1Q8TC92 643 aaKnown RBP13.81□□□□□ -0.2
VARS-227ENST00000489979 CPT1CQ8TCG5 803 aa13.81□□□□□ -0.2
VARS-227ENST00000489979 SSC4DQ8WTU2 575 aa13.81□□□□□ -0.2
VARS-227ENST00000489979 STAMBPL1Q96FJ0 436 aa13.81□□□□□ -0.2
VARS-227ENST00000489979 ELMO2Q96JJ3 720 aa13.81□□□□□ -0.2
VARS-227ENST00000489979 C9orf72Q96LT7 481 aa13.81□□□□□ -0.2
VARS-227ENST00000489979 TRIM7Q9C029 511 aa13.81□□□□□ -0.2
VARS-227ENST00000489979 TWSG1Q9GZX9 223 aa13.81□□□□□ -0.2
VARS-227ENST00000489979 NT5MQ9NPB1 228 aa13.81□□□□□ -0.2
VARS-227ENST00000489979 VPS18Q9P253 973 aa13.81□□□□□ -0.2
VARS-227ENST00000489979 KCND3Q9UK17 655 aa13.81□□□□□ -0.2
VARS-227ENST00000489979 CNOT6Q9ULM6 557 aaKnown RBP13.81□□□□□ -0.2
VARS-227ENST00000489979 SHANK1Q9Y566 2161 aa13.81□□□□□ -0.2
VARS-227ENST00000489979 ITPR2Q14571 2701 aa13.8□□□□□ -0.2
VARS-227ENST00000489979 KIR2DS5A0A0G2JLQ3 304 aa13.8□□□□□ -0.2
VARS-227ENST00000489979 A0A0G2JNG1 304 aa13.8□□□□□ -0.2
VARS-227ENST00000489979 PIPSLA2A3N6 862 aa13.8□□□□□ -0.2
VARS-227ENST00000489979 TMEM191CA6NGB0 347 aa13.8□□□□□ -0.2
VARS-227ENST00000489979 LILRA5A6NI73 299 aa13.8□□□□□ -0.2
VARS-227ENST00000489979 OR5K4A6NMS3 321 aa13.8□□□□□ -0.2
VARS-227ENST00000489979 H3BRJ5 948 aa13.8□□□□□ -0.2
VARS-227ENST00000489979 KIR2DS3K7RE56 304 aa13.8□□□□□ -0.2
VARS-227ENST00000489979 LRCH4O75427 683 aa13.8□□□□□ -0.2
VARS-227ENST00000489979 DNAJB5O75953 348 aa13.8□□□□□ -0.2
VARS-227ENST00000489979 NDUFA10O95299 355 aa13.8□□□□□ -0.2
VARS-227ENST00000489979 C9P02748 559 aa13.8□□□□□ -0.2
VARS-227ENST00000489979 TYRP1P17643 537 aa13.8□□□□□ -0.2
VARS-227ENST00000489979 EPHB1P54762 984 aa13.8□□□□□ -0.2
VARS-227ENST00000489979 ITKQ08881 620 aa13.8□□□□□ -0.2
VARS-227ENST00000489979 KIR2DS5Q14953 304 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms