RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 INPP4BO15327 924 aa11.72□□□□□ -0.53
SRSF4-204ENST00000489898 TPM3P06753 285 aa11.72□□□□□ -0.53
SRSF4-204ENST00000489898 THRAP10827 490 aa11.72□□□□□ -0.53
SRSF4-204ENST00000489898 CES1P23141 567 aa11.72□□□□□ -0.53
SRSF4-204ENST00000489898 CHRNA4P43681 627 aa11.72□□□□□ -0.53
SRSF4-204ENST00000489898 GPR1P46091 355 aa11.72□□□□□ -0.53
SRSF4-204ENST00000489898 INHBCP55103 352 aa11.72□□□□□ -0.53
SRSF4-204ENST00000489898 OR1D5P58170 312 aa11.72□□□□□ -0.53
SRSF4-204ENST00000489898 DYNLT1P63172 113 aa11.72□□□□□ -0.53
SRSF4-204ENST00000489898 SQSTM1Q13501 440 aa11.72□□□□□ -0.53
SRSF4-204ENST00000489898 ARHGEF7Q14155 803 aa11.72□□□□□ -0.53
SRSF4-204ENST00000489898 LLGL1Q15334 1064 aa11.72□□□□□ -0.53
SRSF4-204ENST00000489898 TSR1Q2NL82 804 aaKnown RBP11.72□□□□□ -0.53
SRSF4-204ENST00000489898 ZNF648Q5T619 568 aaPredicted RBP11.72□□□□□ -0.53
SRSF4-204ENST00000489898 TMC3Q7Z5M5 1100 aa11.72□□□□□ -0.53
SRSF4-204ENST00000489898 DTX1Q86Y01 620 aa11.72□□□□□ -0.53
SRSF4-204ENST00000489898 MAP7D3Q8IWC1 876 aa11.72□□□□□ -0.53
SRSF4-204ENST00000489898 RHOT1Q8IXI2 618 aa11.72□□□□□ -0.53
SRSF4-204ENST00000489898 KATNAL2Q8IYT4 538 aa11.72□□□□□ -0.53
SRSF4-204ENST00000489898 LSMEM2Q8N112 164 aa11.72□□□□□ -0.53
SRSF4-204ENST00000489898 LRRC57Q8N9N7 239 aa11.72□□□□□ -0.53
SRSF4-204ENST00000489898 GLMNQ92990 594 aa11.72□□□□□ -0.53
SRSF4-204ENST00000489898 CCDC97Q96F63 343 aaPredicted RBP11.72□□□□□ -0.53
SRSF4-204ENST00000489898 NAF1Q96HR8 494 aaKnown RBP11.72□□□□□ -0.53
SRSF4-204ENST00000489898 MRGPRX2Q96LB1 330 aa11.72□□□□□ -0.53
SRSF4-204ENST00000489898 TEKT5Q96M29 485 aa11.72□□□□□ -0.53
SRSF4-204ENST00000489898 CCDC42Q96M95 316 aa11.72□□□□□ -0.53
SRSF4-204ENST00000489898 GSDMCQ9BYG8 508 aa11.72□□□□□ -0.53
SRSF4-204ENST00000489898 ABCG4Q9H172 646 aa11.72□□□□□ -0.53
SRSF4-204ENST00000489898 SUDS3Q9H7L9 328 aaPredicted RBP11.72□□□□□ -0.53
SRSF4-204ENST00000489898 THSD1Q9NS62 852 aa11.72□□□□□ -0.53
SRSF4-204ENST00000489898 TBC1D29Q9UFV1 150 aa11.72□□□□□ -0.53
SRSF4-204ENST00000489898 PRKAB1Q9Y478 270 aa11.72□□□□□ -0.53
SRSF4-204ENST00000489898 ALG6Q9Y672 507 aa11.72□□□□□ -0.53
SRSF4-204ENST00000489898 NUP210LQ5VU65 1888 aa11.72□□□□□ -0.53
SRSF4-204ENST00000489898 IGHV5-10-1A0A0J9YXX1 117 aa11.71□□□□□ -0.53
SRSF4-204ENST00000489898 LOC285095A0A1B0GVY8 99 aa11.71□□□□□ -0.53
SRSF4-204ENST00000489898 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.71□□□□□ -0.53
SRSF4-204ENST00000489898 TNFSF15O95150 251 aa11.71□□□□□ -0.53
SRSF4-204ENST00000489898 BPIP17213 487 aa11.71□□□□□ -0.53
SRSF4-204ENST00000489898 NFKB1P19838 968 aa11.71□□□□□ -0.53
SRSF4-204ENST00000489898 SLC5A2P31639 672 aa11.71□□□□□ -0.53
SRSF4-204ENST00000489898 ACTR1BP42025 376 aa11.71□□□□□ -0.53
SRSF4-204ENST00000489898 SLC1A1P43005 524 aa11.71□□□□□ -0.53
SRSF4-204ENST00000489898 ZNF75DP51815 510 aa11.71□□□□□ -0.53
SRSF4-204ENST00000489898 ACTR1AP61163 376 aa11.71□□□□□ -0.53
SRSF4-204ENST00000489898 UBE2IP63279 158 aaKnown RBP11.71□□□□□ -0.53
SRSF4-204ENST00000489898 ILF3Q12906 894 aaKnown RBP eCLIP11.71□□□□□ -0.53
SRSF4-204ENST00000489898 TGIF1Q15583 401 aa11.71□□□□□ -0.53
SRSF4-204ENST00000489898 TEX44Q53QW1 395 aa11.71□□□□□ -0.53
SRSF4-204ENST00000489898 AADACL2Q6P093 401 aa11.71□□□□□ -0.53
SRSF4-204ENST00000489898 RAB11FIP2Q7L804 512 aa11.71□□□□□ -0.53
SRSF4-204ENST00000489898 ZNF761Q86XN6 746 aaPredicted RBP11.71□□□□□ -0.53
SRSF4-204ENST00000489898 ZNF567Q8N184 647 aa11.71□□□□□ -0.53
SRSF4-204ENST00000489898 Q8N9G6 341 aaPredicted RBP11.71□□□□□ -0.53
SRSF4-204ENST00000489898 OR6C4Q8NGE1 309 aa11.71□□□□□ -0.53
SRSF4-204ENST00000489898 NSMCE1Q8WV22 266 aa11.71□□□□□ -0.53
SRSF4-204ENST00000489898 KCNE4Q8WWG9 221 aa11.71□□□□□ -0.53
SRSF4-204ENST00000489898 ALG3Q92685 438 aa11.71□□□□□ -0.53
SRSF4-204ENST00000489898 AGAP3Q96P47 875 aa11.71□□□□□ -0.53
SRSF4-204ENST00000489898 UBL7Q96S82 380 aaPredicted RBP11.71□□□□□ -0.53
SRSF4-204ENST00000489898 LACRTQ9GZZ8 138 aa11.71□□□□□ -0.53
SRSF4-204ENST00000489898 CDH19Q9H159 772 aa11.71□□□□□ -0.53
SRSF4-204ENST00000489898 DPEP2Q9H4A9 486 aa11.71□□□□□ -0.53
SRSF4-204ENST00000489898 DEF6Q9H4E7 631 aa11.71□□□□□ -0.53
SRSF4-204ENST00000489898 GLOD4Q9HC38 313 aa11.71□□□□□ -0.53
SRSF4-204ENST00000489898 EPB41L5Q9HCM4 733 aa11.71□□□□□ -0.53
SRSF4-204ENST00000489898 ARFGAP3Q9NP61 516 aa11.71□□□□□ -0.53
SRSF4-204ENST00000489898 OGFRQ9NZT2 677 aa11.71□□□□□ -0.53
SRSF4-204ENST00000489898 SCHIP1Q9P0W5 487 aaPredicted RBP11.71□□□□□ -0.53
SRSF4-204ENST00000489898 PDP2Q9P2J9 529 aa11.71□□□□□ -0.53
SRSF4-204ENST00000489898 ATXN10Q9UBB4 475 aa11.71□□□□□ -0.53
SRSF4-204ENST00000489898 SLC23A2Q9UGH3 650 aa11.71□□□□□ -0.53
SRSF4-204ENST00000489898 LOXL2Q9Y4K0 774 aa11.71□□□□□ -0.53
SRSF4-204ENST00000489898 DUSP10Q9Y6W6 482 aa11.71□□□□□ -0.53
SRSF4-204ENST00000489898 PRAMEF33A0A0G2JMD5 474 aa11.7□□□□□ -0.54
SRSF4-204ENST00000489898 K7ENP7 123 aa11.7□□□□□ -0.54
SRSF4-204ENST00000489898 PDE2AO00408 941 aaPredicted RBP11.7□□□□□ -0.54
SRSF4-204ENST00000489898 NUAK1O60285 661 aa11.7□□□□□ -0.54
SRSF4-204ENST00000489898 CST8O60676 142 aa11.7□□□□□ -0.54
SRSF4-204ENST00000489898 PRAMEF10O60809 474 aa11.7□□□□□ -0.54
SRSF4-204ENST00000489898 CPNE6O95741 557 aa11.7□□□□□ -0.54
SRSF4-204ENST00000489898 CCL4P13236 92 aa11.7□□□□□ -0.54
SRSF4-204ENST00000489898 BRAFP15056 766 aa11.7□□□□□ -0.54
SRSF4-204ENST00000489898 ZNF8P17098 575 aaPredicted RBP11.7□□□□□ -0.54
SRSF4-204ENST00000489898 CTNNA1P35221 906 aaKnown RBP11.7□□□□□ -0.54
SRSF4-204ENST00000489898 CXADRP78310 365 aa11.7□□□□□ -0.54
SRSF4-204ENST00000489898 ITKQ08881 620 aa11.7□□□□□ -0.54
SRSF4-204ENST00000489898 AP1B1Q10567 949 aa11.7□□□□□ -0.54
SRSF4-204ENST00000489898 EIF3IQ13347 325 aaKnown RBP11.7□□□□□ -0.54
SRSF4-204ENST00000489898 OLIG2Q13516 323 aa11.7□□□□□ -0.54
SRSF4-204ENST00000489898 PDK1Q15118 436 aa11.7□□□□□ -0.54
SRSF4-204ENST00000489898 PPP2R5EQ16537 467 aa11.7□□□□□ -0.54
SRSF4-204ENST00000489898 INO80CQ6PI98 192 aaPredicted RBP11.7□□□□□ -0.54
SRSF4-204ENST00000489898 BBS12Q6ZW61 710 aa11.7□□□□□ -0.54
SRSF4-204ENST00000489898 MARK2Q7KZI7 788 aaKnown RBP11.7□□□□□ -0.54
SRSF4-204ENST00000489898 ADGRG6Q86SQ4 1221 aa11.7□□□□□ -0.54
SRSF4-204ENST00000489898 RFX6Q8HWS3 928 aa11.7□□□□□ -0.54
SRSF4-204ENST00000489898 CCNYQ8ND76 341 aa11.7□□□□□ -0.54
SRSF4-204ENST00000489898 RCBTB1Q8NDN9 531 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms