RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 C9orf50Q5SZB4 431 aa5.05□□□□□ -1.6
CCDC39-206ENST00000489868 DCST1Q5T197 706 aa5.05□□□□□ -1.6
CCDC39-206ENST00000489868 HAUS3Q68CZ6 603 aa5.05□□□□□ -1.6
CCDC39-206ENST00000489868 LCN10Q6JVE6 187 aa5.05□□□□□ -1.6
CCDC39-206ENST00000489868 NCEH1Q6PIU2 408 aa5.05□□□□□ -1.6
CCDC39-206ENST00000489868 ZNF329Q86UD4 541 aa5.05□□□□□ -1.6
CCDC39-206ENST00000489868 TMPRSS12Q86WS5 348 aa5.05□□□□□ -1.6
CCDC39-206ENST00000489868 KMT5CQ86Y97 462 aa5.05□□□□□ -1.6
CCDC39-206ENST00000489868 ZKSCAN4Q969J2 545 aaPredicted RBP5.05□□□□□ -1.6
CCDC39-206ENST00000489868 PIGTQ969N2 578 aa5.05□□□□□ -1.6
CCDC39-206ENST00000489868 EGLN2Q96KS0 407 aa5.05□□□□□ -1.6
CCDC39-206ENST00000489868 ITPAQ9BY32 194 aa5.05□□□□□ -1.6
CCDC39-206ENST00000489868 MUC13Q9H3R2 512 aa5.05□□□□□ -1.6
CCDC39-206ENST00000489868 SMC4Q9NTJ3 1288 aa5.05□□□□□ -1.6
CCDC39-206ENST00000489868 OLA1Q9NTK5 396 aaKnown RBP5.05□□□□□ -1.6
CCDC39-206ENST00000489868 ZNF69Q9UC07 566 aa5.05□□□□□ -1.6
CCDC39-206ENST00000489868 KLHL20Q9Y2M5 609 aa5.05□□□□□ -1.6
CCDC39-206ENST00000489868 PTPRCP08575 1304 aa5.04□□□□□ -1.6
CCDC39-206ENST00000489868 ASPDHA6ND91 283 aa5.04□□□□□ -1.6
CCDC39-206ENST00000489868 FAM90A26D6RGX4 464 aa5.04□□□□□ -1.6
CCDC39-206ENST00000489868 HCRTR2O43614 444 aa5.04□□□□□ -1.6
CCDC39-206ENST00000489868 USO1O60763 962 aaKnown RBP5.04□□□□□ -1.6
CCDC39-206ENST00000489868 ICAM1P05362 532 aa5.04□□□□□ -1.6
CCDC39-206ENST00000489868 KCNA5P22460 613 aa5.04□□□□□ -1.6
CCDC39-206ENST00000489868 MARK3P27448 753 aa5.04□□□□□ -1.6
CCDC39-206ENST00000489868 USP8P40818 1118 aa5.04□□□□□ -1.6
CCDC39-206ENST00000489868 NIPAL4Q0D2K0 466 aa5.04□□□□□ -1.6
CCDC39-206ENST00000489868 CDC16Q13042 620 aa5.04□□□□□ -1.6
CCDC39-206ENST00000489868 ZNF234Q14588 700 aa5.04□□□□□ -1.6
CCDC39-206ENST00000489868 NSUN5P2Q63ZY6 315 aa5.04□□□□□ -1.6
CCDC39-206ENST00000489868 TRNP1Q6NT89 227 aa5.04□□□□□ -1.6
CCDC39-206ENST00000489868 FAM180BQ6P0A1 224 aa5.04□□□□□ -1.6
CCDC39-206ENST00000489868 ADSSL1Q8N142 457 aa5.04□□□□□ -1.6
CCDC39-206ENST00000489868 MAB21L3Q8N8X9 362 aa5.04□□□□□ -1.6
CCDC39-206ENST00000489868 ANKRD52Q8NB46 1076 aa5.04□□□□□ -1.6
CCDC39-206ENST00000489868 CDCA5Q96FF9 252 aa5.04□□□□□ -1.6
CCDC39-206ENST00000489868 HARBI1Q96MB7 349 aa5.04□□□□□ -1.6
CCDC39-206ENST00000489868 SYT17Q9BSW7 474 aa5.04□□□□□ -1.6
CCDC39-206ENST00000489868 TCF7L2Q9NQB0 619 aa5.04□□□□□ -1.6
CCDC39-206ENST00000489868 ZFP57Q9NU63 452 aa5.04□□□□□ -1.6
CCDC39-206ENST00000489868 MTMR10Q9NXD2 777 aa5.04□□□□□ -1.6
CCDC39-206ENST00000489868 OR14J1Q9UGF5 321 aa5.04□□□□□ -1.6
CCDC39-206ENST00000489868 FBXL2Q9UKC9 423 aa5.04□□□□□ -1.6
CCDC39-206ENST00000489868 DLGAP4Q9Y2H0 992 aa5.04□□□□□ -1.6
CCDC39-206ENST00000489868 TDRD9Q8NDG6 1382 aaKnown RBP5.04□□□□□ -1.6
CCDC39-206ENST00000489868 ARHGEF40Q8TER5 1519 aa5.03□□□□□ -1.6
CCDC39-206ENST00000489868 A0A087X0M5 115 aa5.03□□□□□ -1.6
CCDC39-206ENST00000489868 A0A1B0GX30 115 aa5.03□□□□□ -1.6
CCDC39-206ENST00000489868 A0A1W2PP11 408 aa5.03□□□□□ -1.6
CCDC39-206ENST00000489868 SLC25A12O75746 678 aa5.03□□□□□ -1.6
CCDC39-206ENST00000489868 CCNDBP1O95273 360 aa5.03□□□□□ -1.6
CCDC39-206ENST00000489868 LAMP2P13473 410 aa5.03□□□□□ -1.6
CCDC39-206ENST00000489868 RARGP13631 454 aa5.03□□□□□ -1.6
CCDC39-206ENST00000489868 UGT1A1P22309 533 aa5.03□□□□□ -1.6
CCDC39-206ENST00000489868 PSMA4P25789 261 aaKnown RBP5.03□□□□□ -1.6
CCDC39-206ENST00000489868 NFKBIAP25963 317 aa5.03□□□□□ -1.6
CCDC39-206ENST00000489868 ACSM2AQ08AH3 577 aa5.03□□□□□ -1.6
CCDC39-206ENST00000489868 RBBP5Q15291 538 aaKnown RBP5.03□□□□□ -1.6
CCDC39-206ENST00000489868 KRTCAP3Q53RY4 240 aa5.03□□□□□ -1.6
CCDC39-206ENST00000489868 ZNF805Q5CZA5 627 aa5.03□□□□□ -1.6
CCDC39-206ENST00000489868 DSTYKQ6XUX3 929 aa5.03□□□□□ -1.6
CCDC39-206ENST00000489868 SDCCAG8Q86SQ7 713 aaPredicted RBP5.03□□□□□ -1.6
CCDC39-206ENST00000489868 PAF1Q8N7H5 531 aa5.03□□□□□ -1.6
CCDC39-206ENST00000489868 IL17RCQ8NAC3 791 aa5.03□□□□□ -1.6
CCDC39-206ENST00000489868 HJURPQ8NCD3 748 aaPredicted RBP5.03□□□□□ -1.6
CCDC39-206ENST00000489868 OR1J2Q8NGS2 313 aa5.03□□□□□ -1.6
CCDC39-206ENST00000489868 ARHGEF2Q92974 986 aaKnown RBP5.03□□□□□ -1.6
CCDC39-206ENST00000489868 FEM1CQ96JP0 617 aa5.03□□□□□ -1.6
CCDC39-206ENST00000489868 C1orf74Q96LT6 269 aa5.03□□□□□ -1.6
CCDC39-206ENST00000489868 QRFPRQ96P65 431 aa5.03□□□□□ -1.6
CCDC39-206ENST00000489868 CORO1CQ9ULV4 474 aaPredicted RBP5.03□□□□□ -1.6
CCDC39-206ENST00000489868 PGPEP1LA6NFU8 196 aa5.02□□□□□ -1.61
CCDC39-206ENST00000489868 H3BQ06 376 aaPredicted RBP5.02□□□□□ -1.61
CCDC39-206ENST00000489868 ANKRD28O15084 1053 aa5.02□□□□□ -1.61
CCDC39-206ENST00000489868 KCNN4O15554 427 aa5.02□□□□□ -1.61
CCDC39-206ENST00000489868 GRID2O43424 1007 aa5.02□□□□□ -1.61
CCDC39-206ENST00000489868 LMX1BO60663 402 aa5.02□□□□□ -1.61
CCDC39-206ENST00000489868 WISP2O76076 250 aa5.02□□□□□ -1.61
CCDC39-206ENST00000489868 IGKV3-20P01619 116 aa5.02□□□□□ -1.61
CCDC39-206ENST00000489868 GNL1P36915 607 aaPredicted RBP5.02□□□□□ -1.61
CCDC39-206ENST00000489868 TAS2R40P59535 323 aa5.02□□□□□ -1.61
CCDC39-206ENST00000489868 DCAF7P61962 342 aa5.02□□□□□ -1.61
CCDC39-206ENST00000489868 COG7P83436 770 aa5.02□□□□□ -1.61
CCDC39-206ENST00000489868 DDX10Q13206 875 aaKnown RBP5.02□□□□□ -1.61
CCDC39-206ENST00000489868 GTF2H2Q13888 395 aa5.02□□□□□ -1.61
CCDC39-206ENST00000489868 SYT16Q17RD7 645 aa5.02□□□□□ -1.61
CCDC39-206ENST00000489868 PNLIPRP3Q17RR3 467 aa5.02□□□□□ -1.61
CCDC39-206ENST00000489868 STPG1Q5TH74 334 aa5.02□□□□□ -1.61
CCDC39-206ENST00000489868 IRAK1BP1Q5VVH5 260 aa5.02□□□□□ -1.61
CCDC39-206ENST00000489868 GTF2H2CQ6P1K8 395 aa5.02□□□□□ -1.61
CCDC39-206ENST00000489868 PAPD4Q6PIY7 484 aaKnown RBP5.02□□□□□ -1.61
CCDC39-206ENST00000489868 GLDNQ6ZMI3 551 aaPredicted RBP5.02□□□□□ -1.61
CCDC39-206ENST00000489868 TBC1D1Q86TI0 1168 aaPredicted RBP5.02□□□□□ -1.61
CCDC39-206ENST00000489868 KCNH5Q8NCM2 988 aa5.02□□□□□ -1.61
CCDC39-206ENST00000489868 SMC6Q96SB8 1091 aa5.02□□□□□ -1.61
CCDC39-206ENST00000489868 SEPT5Q99719 369 aaPredicted RBP5.02□□□□□ -1.61
CCDC39-206ENST00000489868 POLR3GLQ9BT43 218 aa5.02□□□□□ -1.61
CCDC39-206ENST00000489868 MMP28Q9H239 520 aa5.02□□□□□ -1.61
CCDC39-206ENST00000489868 RRP7BPQ9NSQ0 103 aa5.02□□□□□ -1.61
CCDC39-206ENST00000489868 ABCF3Q9NUQ8 709 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms