RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 KCNN4O15554 427 aa13.41□□□□□ -0.26
LMO4-203ENST00000489303 ZW10O43264 779 aa13.41□□□□□ -0.26
LMO4-203ENST00000489303 TCEA3O75764 348 aa13.41□□□□□ -0.26
LMO4-203ENST00000489303 ZIC2O95409 532 aaPredicted RBP13.41□□□□□ -0.26
LMO4-203ENST00000489303 SOD1P00441 154 aa13.41□□□□□ -0.26
LMO4-203ENST00000489303 HLA-DPA1P20036 260 aa13.41□□□□□ -0.26
LMO4-203ENST00000489303 ABCG1P45844 678 aa13.41□□□□□ -0.26
LMO4-203ENST00000489303 POLD2P49005 469 aa13.41□□□□□ -0.26
LMO4-203ENST00000489303 GEMP55040 296 aa13.41□□□□□ -0.26
LMO4-203ENST00000489303 LRP8Q14114 963 aa13.41□□□□□ -0.26
LMO4-203ENST00000489303 SPIDRQ14159 915 aa13.41□□□□□ -0.26
LMO4-203ENST00000489303 ZNF569Q5MCW4 686 aa13.41□□□□□ -0.26
LMO4-203ENST00000489303 PERM1Q5SV97 790 aa13.41□□□□□ -0.26
LMO4-203ENST00000489303 HENMT1Q5T8I9 393 aaKnown RBP13.41□□□□□ -0.26
LMO4-203ENST00000489303 CDCP2Q5VXM1 449 aa13.41□□□□□ -0.26
LMO4-203ENST00000489303 ALS2CLQ60I27 953 aa13.41□□□□□ -0.26
LMO4-203ENST00000489303 RBM44Q6ZP01 1051 aaKnown RBP13.41□□□□□ -0.26
LMO4-203ENST00000489303 MARK2Q7KZI7 788 aaKnown RBP13.41□□□□□ -0.26
LMO4-203ENST00000489303 TMC3Q7Z5M5 1100 aa13.41□□□□□ -0.26
LMO4-203ENST00000489303 GPR156Q8NFN8 814 aa13.41□□□□□ -0.26
LMO4-203ENST00000489303 IPMKQ8NFU5 416 aa13.41□□□□□ -0.26
LMO4-203ENST00000489303 GRAMD1AQ96CP6 724 aa13.41□□□□□ -0.26
LMO4-203ENST00000489303 ZSCAN5AQ9BUG6 496 aa13.41□□□□□ -0.26
LMO4-203ENST00000489303 HACD3Q9P035 362 aa13.41□□□□□ -0.26
LMO4-203ENST00000489303 VPS18Q9P253 973 aa13.41□□□□□ -0.26
LMO4-203ENST00000489303 PACSIN2Q9UNF0 486 aaPredicted RBP13.41□□□□□ -0.26
LMO4-203ENST00000489303 AAR2Q9Y312 384 aaKnown RBP13.41□□□□□ -0.26
LMO4-203ENST00000489303 CSO75390 466 aaKnown RBP13.4□□□□□ -0.26
LMO4-203ENST00000489303 MPOP05164 745 aa13.4□□□□□ -0.26
LMO4-203ENST00000489303 CCDC175P0C221 793 aa13.4□□□□□ -0.26
LMO4-203ENST00000489303 GLB1P16278 677 aa13.4□□□□□ -0.26
LMO4-203ENST00000489303 ADCY8P40145 1251 aa13.4□□□□□ -0.26
LMO4-203ENST00000489303 DCDC1P59894 354 aa13.4□□□□□ -0.26
LMO4-203ENST00000489303 CTBSQ01459 385 aa13.4□□□□□ -0.26
LMO4-203ENST00000489303 CCDC173Q0VFZ6 552 aa13.4□□□□□ -0.26
LMO4-203ENST00000489303 C14orf28Q4W4Y0 310 aa13.4□□□□□ -0.26
LMO4-203ENST00000489303 SEL1L2Q5TEA6 688 aa13.4□□□□□ -0.26
LMO4-203ENST00000489303 ZDHHC20Q5W0Z9 365 aa13.4□□□□□ -0.26
LMO4-203ENST00000489303 PDPK2PQ6A1A2 396 aa13.4□□□□□ -0.26
LMO4-203ENST00000489303 OGFOD3Q6PK18 319 aa13.4□□□□□ -0.26
LMO4-203ENST00000489303 SLC30A9Q6PML9 568 aa13.4□□□□□ -0.26
LMO4-203ENST00000489303 KDELC1Q6UW63 502 aa13.4□□□□□ -0.26
LMO4-203ENST00000489303 TRIM74Q86UV6 250 aa13.4□□□□□ -0.26
LMO4-203ENST00000489303 SLC25A41Q8N5S1 370 aa13.4□□□□□ -0.26
LMO4-203ENST00000489303 TRAM1L1Q8N609 369 aa13.4□□□□□ -0.26
LMO4-203ENST00000489303 CCL4L1Q8NHW4 92 aa13.4□□□□□ -0.26
LMO4-203ENST00000489303 ZDHHC1Q8WTX9 485 aa13.4□□□□□ -0.26
LMO4-203ENST00000489303 CCDC74AQ96AQ1 378 aa13.4□□□□□ -0.26
LMO4-203ENST00000489303 SCARF2Q96GP6 870 aaPredicted RBP13.4□□□□□ -0.26
LMO4-203ENST00000489303 NAF1Q96HR8 494 aaKnown RBP13.4□□□□□ -0.26
LMO4-203ENST00000489303 COX14Q96I36 57 aa13.4□□□□□ -0.26
LMO4-203ENST00000489303 MRGPRX2Q96LB1 330 aa13.4□□□□□ -0.26
LMO4-203ENST00000489303 ALS2CR12Q96Q35 445 aa13.4□□□□□ -0.26
LMO4-203ENST00000489303 GBA3Q9H227 469 aa13.4□□□□□ -0.26
LMO4-203ENST00000489303 PRORYQ9H606 182 aa13.4□□□□□ -0.26
LMO4-203ENST00000489303 C10orf88Q9H8K7 445 aa13.4□□□□□ -0.26
LMO4-203ENST00000489303 RMI1Q9H9A7 625 aa13.4□□□□□ -0.26
LMO4-203ENST00000489303 TAAR2Q9P1P5 351 aa13.4□□□□□ -0.26
LMO4-203ENST00000489303 ZNHIT2Q9UHR6 403 aa13.4□□□□□ -0.26
LMO4-203ENST00000489303 A0A0U1RQJ8 604 aa13.39□□□□□ -0.27
LMO4-203ENST00000489303 A0A1W2PNU3 283 aaPredicted RBP13.39□□□□□ -0.27
LMO4-203ENST00000489303 PMS2P1A4D2B8 440 aa13.39□□□□□ -0.27
LMO4-203ENST00000489303 TMX2-CTNND1H3BSU7 103 aa13.39□□□□□ -0.27
LMO4-203ENST00000489303 DDX3YO15523 660 aaKnown RBP13.39□□□□□ -0.27
LMO4-203ENST00000489303 C1QL1O75973 258 aa13.39□□□□□ -0.27
LMO4-203ENST00000489303 SLC25A14O95258 325 aaPredicted RBP13.39□□□□□ -0.27
LMO4-203ENST00000489303 FGF1P05230 155 aa13.39□□□□□ -0.27
LMO4-203ENST00000489303 PNLIPP16233 465 aa13.39□□□□□ -0.27
LMO4-203ENST00000489303 ACTR1BP42025 376 aa13.39□□□□□ -0.27
LMO4-203ENST00000489303 ACTR1AP61163 376 aa13.39□□□□□ -0.27
LMO4-203ENST00000489303 SLC1A5Q15758 541 aa13.39□□□□□ -0.27
LMO4-203ENST00000489303 PYCR3Q53H96 274 aa13.39□□□□□ -0.27
LMO4-203ENST00000489303 SIRPB2Q5JXA9 342 aa13.39□□□□□ -0.27
LMO4-203ENST00000489303 ANKRD20A2Q5SQ80 823 aa13.39□□□□□ -0.27
LMO4-203ENST00000489303 ANKRD20A1Q5TYW2 823 aa13.39□□□□□ -0.27
LMO4-203ENST00000489303 ANKRD20A3Q5VUR7 823 aa13.39□□□□□ -0.27
LMO4-203ENST00000489303 AADACL2Q6P093 401 aa13.39□□□□□ -0.27
LMO4-203ENST00000489303 GLT6D1Q7Z4J2 308 aa13.39□□□□□ -0.27
LMO4-203ENST00000489303 LSMEM2Q8N112 164 aa13.39□□□□□ -0.27
LMO4-203ENST00000489303 GPR26Q8NDV2 337 aa13.39□□□□□ -0.27
LMO4-203ENST00000489303 BLOC1S5Q8TDH9 187 aa13.39□□□□□ -0.27
LMO4-203ENST00000489303 OXNAD1Q96HP4 312 aaPredicted RBP13.39□□□□□ -0.27
LMO4-203ENST00000489303 HES6Q96HZ4 224 aa13.39□□□□□ -0.27
LMO4-203ENST00000489303 SPATA13Q96N96 652 aa13.39□□□□□ -0.27
LMO4-203ENST00000489303 GFM1Q96RP9 751 aaKnown RBP13.39□□□□□ -0.27
LMO4-203ENST00000489303 WDR24Q96S15 920 aa13.39□□□□□ -0.27
LMO4-203ENST00000489303 FAM118BQ9BPY3 351 aa13.39□□□□□ -0.27
LMO4-203ENST00000489303 HERPUD2Q9BSE4 406 aa13.39□□□□□ -0.27
LMO4-203ENST00000489303 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.39□□□□□ -0.27
LMO4-203ENST00000489303 LRIT1Q9P2V4 623 aa13.39□□□□□ -0.27
LMO4-203ENST00000489303 NFKBIL1Q9UBC1 381 aaPredicted RBP13.39□□□□□ -0.27
LMO4-203ENST00000489303 CAPN6Q9Y6Q1 641 aa13.39□□□□□ -0.27
LMO4-203ENST00000489303 RHPN2P1A8MT19 583 aa13.38□□□□□ -0.27
LMO4-203ENST00000489303 FADS2P1A8MWK0 482 aa13.38□□□□□ -0.27
LMO4-203ENST00000489303 GPR89AB7ZAQ6 455 aa13.38□□□□□ -0.27
LMO4-203ENST00000489303 NUDT21O43809 227 aaKnown RBP13.38□□□□□ -0.27
LMO4-203ENST00000489303 NOBOXO60393 691 aa13.38□□□□□ -0.27
LMO4-203ENST00000489303 USP12O75317 370 aa13.38□□□□□ -0.27
LMO4-203ENST00000489303 FUCA1P04066 466 aa13.38□□□□□ -0.27
LMO4-203ENST00000489303 ATP1A1P05023 1023 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms