RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 FADS2P1A8MWK0 482 aa14.17□□□□□ -0.14
BRCA1-218ENST00000489037 B4DGG1 531 aa14.17□□□□□ -0.14
BRCA1-218ENST00000489037 ZW10O43264 779 aa14.17□□□□□ -0.14
BRCA1-218ENST00000489037 AGTP01019 485 aa14.17□□□□□ -0.14
BRCA1-218ENST00000489037 BPIP17213 487 aa14.17□□□□□ -0.14
BRCA1-218ENST00000489037 STIP1P31948 543 aaKnown RBP14.17□□□□□ -0.14
BRCA1-218ENST00000489037 HMGCLP35914 325 aa14.17□□□□□ -0.14
BRCA1-218ENST00000489037 CHRNA4P43681 627 aa14.17□□□□□ -0.14
BRCA1-218ENST00000489037 CTBSQ01459 385 aa14.17□□□□□ -0.14
BRCA1-218ENST00000489037 LRP8Q14114 963 aa14.17□□□□□ -0.14
BRCA1-218ENST00000489037 P3H1Q32P28 736 aa14.17□□□□□ -0.14
BRCA1-218ENST00000489037 KCTD16Q68DU8 428 aa14.17□□□□□ -0.14
BRCA1-218ENST00000489037 OGFOD3Q6PK18 319 aa14.17□□□□□ -0.14
BRCA1-218ENST00000489037 PHYKPLQ8IUZ5 450 aa14.17□□□□□ -0.14
BRCA1-218ENST00000489037 FAM71DQ8N9W8 422 aa14.17□□□□□ -0.14
BRCA1-218ENST00000489037 KYQ8NBH2 561 aa14.17□□□□□ -0.14
BRCA1-218ENST00000489037 CCL4L1Q8NHW4 92 aa14.17□□□□□ -0.14
BRCA1-218ENST00000489037 ZDHHC1Q8WTX9 485 aa14.17□□□□□ -0.14
BRCA1-218ENST00000489037 ZCCHC14Q8WYQ9 949 aaKnown RBP14.17□□□□□ -0.14
BRCA1-218ENST00000489037 EID2BQ96D98 161 aa14.17□□□□□ -0.14
BRCA1-218ENST00000489037 SCARF2Q96GP6 870 aaPredicted RBP14.17□□□□□ -0.14
BRCA1-218ENST00000489037 PLEKHG4BQ96PX9 1271 aa14.17□□□□□ -0.14
BRCA1-218ENST00000489037 WDR24Q96S15 920 aa14.17□□□□□ -0.14
BRCA1-218ENST00000489037 CCDC86Q9H6F5 360 aaKnown RBP14.17□□□□□ -0.14
BRCA1-218ENST00000489037 SYNDIG1Q9H7V2 258 aa14.17□□□□□ -0.14
BRCA1-218ENST00000489037 FEZ2Q9UHY8 353 aaPredicted RBP14.17□□□□□ -0.14
BRCA1-218ENST00000489037 ZNF148Q9UQR1 794 aa14.17□□□□□ -0.14
BRCA1-218ENST00000489037 ACACAQ13085 2346 aa14.16□□□□□ -0.14
BRCA1-218ENST00000489037 TRABD2BA6NFA1 517 aa14.16□□□□□ -0.14
BRCA1-218ENST00000489037 AURKAO14965 403 aa14.16□□□□□ -0.14
BRCA1-218ENST00000489037 STX7O15400 261 aaKnown RBP14.16□□□□□ -0.14
BRCA1-218ENST00000489037 ZSCAN12O43309 604 aa14.16□□□□□ -0.14
BRCA1-218ENST00000489037 PPFIA2O75334 1257 aa14.16□□□□□ -0.14
BRCA1-218ENST00000489037 ATP1A1P05023 1023 aaKnown RBP14.16□□□□□ -0.14
BRCA1-218ENST00000489037 SPAM1P38567 509 aa14.16□□□□□ -0.14
BRCA1-218ENST00000489037 ACTR1BP42025 376 aa14.16□□□□□ -0.14
BRCA1-218ENST00000489037 CLDN6P56747 220 aa14.16□□□□□ -0.14
BRCA1-218ENST00000489037 ACTR1AP61163 376 aa14.16□□□□□ -0.14
BRCA1-218ENST00000489037 PDE1BQ01064 536 aa14.16□□□□□ -0.14
BRCA1-218ENST00000489037 C14orf28Q4W4Y0 310 aa14.16□□□□□ -0.14
BRCA1-218ENST00000489037 PYCR3Q53H96 274 aa14.16□□□□□ -0.14
BRCA1-218ENST00000489037 SLC30A9Q6PML9 568 aa14.16□□□□□ -0.14
BRCA1-218ENST00000489037 MARCH9Q86YJ5 346 aa14.16□□□□□ -0.14
BRCA1-218ENST00000489037 DCBLD1Q8N8Z6 715 aa14.16□□□□□ -0.14
BRCA1-218ENST00000489037 KDF1Q8NAX2 398 aaPredicted RBP14.16□□□□□ -0.14
BRCA1-218ENST00000489037 GPR156Q8NFN8 814 aa14.16□□□□□ -0.14
BRCA1-218ENST00000489037 GDAP1Q8TB36 358 aa14.16□□□□□ -0.14
BRCA1-218ENST00000489037 SLC35B2Q8TB61 432 aa14.16□□□□□ -0.14
BRCA1-218ENST00000489037 GLYATL1Q969I3 302 aa14.16□□□□□ -0.14
BRCA1-218ENST00000489037 NXPE2Q96DL1 559 aa14.16□□□□□ -0.14
BRCA1-218ENST00000489037 TBL1YQ9BQ87 522 aa14.16□□□□□ -0.14
BRCA1-218ENST00000489037 CCDC3Q9BQI4 270 aa14.16□□□□□ -0.14
BRCA1-218ENST00000489037 TMEM121Q9BTD3 319 aa14.16□□□□□ -0.14
BRCA1-218ENST00000489037 TMEM121BQ9BXQ6 578 aaPredicted RBP14.16□□□□□ -0.14
BRCA1-218ENST00000489037 TRIM39Q9HCM9 518 aa14.16□□□□□ -0.14
BRCA1-218ENST00000489037 TAAR2Q9P1P5 351 aa14.16□□□□□ -0.14
BRCA1-218ENST00000489037 CNOT6Q9ULM6 557 aaKnown RBP14.16□□□□□ -0.14
BRCA1-218ENST00000489037 R3HDM2Q9Y2K5 976 aaKnown RBP14.16□□□□□ -0.14
BRCA1-218ENST00000489037 AK5Q9Y6K8 562 aa14.16□□□□□ -0.14
BRCA1-218ENST00000489037 TCRBV7S2A1N4TA0A589 114 aa14.15□□□□□ -0.14
BRCA1-218ENST00000489037 GPR89AB7ZAQ6 455 aa14.15□□□□□ -0.14
BRCA1-218ENST00000489037 TCEA3O75764 348 aa14.15□□□□□ -0.14
BRCA1-218ENST00000489037 CRTAMO95727 393 aa14.15□□□□□ -0.14
BRCA1-218ENST00000489037 FUCA1P04066 466 aa14.15□□□□□ -0.14
BRCA1-218ENST00000489037 GPR89BP0CG08 455 aa14.15□□□□□ -0.14
BRCA1-218ENST00000489037 GLB1P16278 677 aa14.15□□□□□ -0.14
BRCA1-218ENST00000489037 LPOP22079 712 aaPredicted RBP14.15□□□□□ -0.14
BRCA1-218ENST00000489037 MSNP26038 577 aaKnown RBP14.15□□□□□ -0.14
BRCA1-218ENST00000489037 AK4P27144 223 aaPredicted RBP14.15□□□□□ -0.14
BRCA1-218ENST00000489037 ITGA9Q13797 1035 aa14.15□□□□□ -0.14
BRCA1-218ENST00000489037 GTF2H3Q13889 308 aa14.15□□□□□ -0.14
BRCA1-218ENST00000489037 SPIDRQ14159 915 aa14.15□□□□□ -0.14
BRCA1-218ENST00000489037 TAF1AQ15573 450 aaPredicted RBP14.15□□□□□ -0.14
BRCA1-218ENST00000489037 PERM1Q5SV97 790 aa14.15□□□□□ -0.14
BRCA1-218ENST00000489037 RANBP10Q6VN20 620 aa14.15□□□□□ -0.14
BRCA1-218ENST00000489037 RBM44Q6ZP01 1051 aaKnown RBP14.15□□□□□ -0.14
BRCA1-218ENST00000489037 CHST15Q7LFX5 561 aaPredicted RBP14.15□□□□□ -0.14
BRCA1-218ENST00000489037 TTC30BQ8N4P2 665 aa14.15□□□□□ -0.14
BRCA1-218ENST00000489037 BRSK1Q8TDC3 778 aa14.15□□□□□ -0.14
BRCA1-218ENST00000489037 CCDC74AQ96AQ1 378 aa14.15□□□□□ -0.14
BRCA1-218ENST00000489037 GRAMD1AQ96CP6 724 aa14.15□□□□□ -0.14
BRCA1-218ENST00000489037 TTC25Q96NG3 672 aa14.15□□□□□ -0.14
BRCA1-218ENST00000489037 APOL2Q9BQE5 337 aa14.15□□□□□ -0.14
BRCA1-218ENST00000489037 OR2AG1Q9H205 316 aa14.15□□□□□ -0.14
BRCA1-218ENST00000489037 SPATS2LQ9NUQ6 558 aaKnown RBP14.15□□□□□ -0.14
BRCA1-218ENST00000489037 IL17CQ9P0M4 197 aa14.15□□□□□ -0.14
BRCA1-218ENST00000489037 OAS3Q9Y6K5 1087 aaKnown RBP14.15□□□□□ -0.14
BRCA1-218ENST00000489037 GLYATL1P3A0A0U1RQE8 302 aa14.14□□□□□ -0.15
BRCA1-218ENST00000489037 RHPN2P1A8MT19 583 aa14.14□□□□□ -0.15
BRCA1-218ENST00000489037 GRID2O43424 1007 aa14.14□□□□□ -0.15
BRCA1-218ENST00000489037 LIASO43766 372 aa14.14□□□□□ -0.15
BRCA1-218ENST00000489037 VEGFDO43915 354 aa14.14□□□□□ -0.15
BRCA1-218ENST00000489037 NUAK1O60285 661 aa14.14□□□□□ -0.15
BRCA1-218ENST00000489037 NOBOXO60393 691 aa14.14□□□□□ -0.15
BRCA1-218ENST00000489037 CSO75390 466 aaKnown RBP14.14□□□□□ -0.15
BRCA1-218ENST00000489037 GAS8O95995 478 aa14.14□□□□□ -0.15
BRCA1-218ENST00000489037 IFNB1P01574 187 aa14.14□□□□□ -0.15
BRCA1-218ENST00000489037 SLC2A4P14672 509 aa14.14□□□□□ -0.15
BRCA1-218ENST00000489037 PNLIPP16233 465 aa14.14□□□□□ -0.15
BRCA1-218ENST00000489037 ADRA1AP35348 466 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms