RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 KLHL20Q9Y2M5 609 aa3.55□□□□□ -1.84
RFC4-213ENST00000489028 CLIC4Q9Y696 253 aa3.55□□□□□ -1.84
RFC4-213ENST00000489028 A0A1W2PRG0 241 aa3.54□□□□□ -1.84
RFC4-213ENST00000489028 CTAGE9A4FU28 777 aa3.54□□□□□ -1.84
RFC4-213ENST00000489028 FAM172BPA6NC97 362 aa3.54□□□□□ -1.84
RFC4-213ENST00000489028 FAM90A26D6RGX4 464 aa3.54□□□□□ -1.84
RFC4-213ENST00000489028 FGF17O60258 216 aa3.54□□□□□ -1.84
RFC4-213ENST00000489028 SOCS5O75159 536 aa3.54□□□□□ -1.84
RFC4-213ENST00000489028 KCNK5O95279 499 aa3.54□□□□□ -1.84
RFC4-213ENST00000489028 ATP1A1P05023 1023 aaKnown RBP3.54□□□□□ -1.84
RFC4-213ENST00000489028 CFC1BP0CG36 223 aa3.54□□□□□ -1.84
RFC4-213ENST00000489028 CFC1P0CG37 223 aa3.54□□□□□ -1.84
RFC4-213ENST00000489028 CTAGE8P0CG41 777 aa3.54□□□□□ -1.84
RFC4-213ENST00000489028 NR1D1P20393 614 aa3.54□□□□□ -1.84
RFC4-213ENST00000489028 HOXC9P31274 260 aa3.54□□□□□ -1.84
RFC4-213ENST00000489028 IL15P40933 162 aaPredicted RBP3.54□□□□□ -1.84
RFC4-213ENST00000489028 UBA7P41226 1012 aa3.54□□□□□ -1.84
RFC4-213ENST00000489028 GLIPR1P48060 266 aa3.54□□□□□ -1.84
RFC4-213ENST00000489028 PITX1P78337 314 aaPredicted RBP3.54□□□□□ -1.84
RFC4-213ENST00000489028 GRIK2Q13002 908 aa3.54□□□□□ -1.84
RFC4-213ENST00000489028 RBM39Q14498 530 aaKnown RBP3.54□□□□□ -1.84
RFC4-213ENST00000489028 CCNG2Q16589 344 aa3.54□□□□□ -1.84
RFC4-213ENST00000489028 DPCR1Q3MIW9 517 aa3.54□□□□□ -1.84
RFC4-213ENST00000489028 ACCSLQ4AC99 568 aa3.54□□□□□ -1.84
RFC4-213ENST00000489028 ALFQ53S48 1182 aa3.54□□□□□ -1.84
RFC4-213ENST00000489028 DCST1Q5T197 706 aa3.54□□□□□ -1.84
RFC4-213ENST00000489028 ZNF852Q6ZMS4 543 aa3.54□□□□□ -1.84
RFC4-213ENST00000489028 MMS22LQ6ZRQ5 1243 aa3.54□□□□□ -1.84
RFC4-213ENST00000489028 KCTD8Q6ZWB6 473 aa3.54□□□□□ -1.84
RFC4-213ENST00000489028 CACNA2D4Q7Z3S7 1137 aa3.54□□□□□ -1.84
RFC4-213ENST00000489028 NFE4Q86UQ8 179 aa3.54□□□□□ -1.84
RFC4-213ENST00000489028 CTAGE4Q8IX94 777 aa3.54□□□□□ -1.84
RFC4-213ENST00000489028 DIS3L2Q8IYB7 885 aaKnown RBP3.54□□□□□ -1.84
RFC4-213ENST00000489028 ZBTB8BQ8NAP8 495 aaPredicted RBP3.54□□□□□ -1.84
RFC4-213ENST00000489028 DMBX1Q8NFW5 382 aa3.54□□□□□ -1.84
RFC4-213ENST00000489028 RFFLQ8WZ73 363 aa3.54□□□□□ -1.84
RFC4-213ENST00000489028 PPM1MQ96MI6 270 aa3.54□□□□□ -1.84
RFC4-213ENST00000489028 ZNF583Q96ND8 569 aa3.54□□□□□ -1.84
RFC4-213ENST00000489028 QRFPRQ96P65 431 aa3.54□□□□□ -1.84
RFC4-213ENST00000489028 MAP7D2Q96T17 732 aa3.54□□□□□ -1.84
RFC4-213ENST00000489028 ZNF334Q9HCZ1 680 aaPredicted RBP3.54□□□□□ -1.84
RFC4-213ENST00000489028 DLGAP2Q9P1A6 1054 aa3.54□□□□□ -1.84
RFC4-213ENST00000489028 TMEM98Q9Y2Y6 226 aa3.54□□□□□ -1.84
RFC4-213ENST00000489028 A0A1W2PP11 408 aa3.53□□□□□ -1.84
RFC4-213ENST00000489028 CCDC189A1A4V9 331 aa3.53□□□□□ -1.84
RFC4-213ENST00000489028 M0QZ24 198 aa3.53□□□□□ -1.84
RFC4-213ENST00000489028 NPHP1O15259 732 aa3.53□□□□□ -1.84
RFC4-213ENST00000489028 WDR1O75083 606 aa3.53□□□□□ -1.84
RFC4-213ENST00000489028 RTN3O95197 1032 aaPredicted RBP3.53□□□□□ -1.84
RFC4-213ENST00000489028 TBX18O95935 607 aa3.53□□□□□ -1.84
RFC4-213ENST00000489028 PAK4O96013 591 aaPredicted RBP3.53□□□□□ -1.84
RFC4-213ENST00000489028 CLEC3BP05452 202 aa3.53□□□□□ -1.84
RFC4-213ENST00000489028 SPARCP09486 303 aa3.53□□□□□ -1.84
RFC4-213ENST00000489028 FGF5P12034 268 aa3.53□□□□□ -1.84
RFC4-213ENST00000489028 UBA1P22314 1058 aaKnown RBP3.53□□□□□ -1.84
RFC4-213ENST00000489028 PHEXP78562 749 aa3.53□□□□□ -1.84
RFC4-213ENST00000489028 COG7P83436 770 aa3.53□□□□□ -1.84
RFC4-213ENST00000489028 CSTF3Q12996 717 aaKnown RBP3.53□□□□□ -1.84
RFC4-213ENST00000489028 DMP1Q13316 513 aaPredicted RBP3.53□□□□□ -1.84
RFC4-213ENST00000489028 KRTCAP3Q53RY4 240 aa3.53□□□□□ -1.84
RFC4-213ENST00000489028 OTUD3Q5T2D3 398 aaPredicted RBP3.53□□□□□ -1.84
RFC4-213ENST00000489028 OR7E24Q6IFN5 339 aa3.53□□□□□ -1.84
RFC4-213ENST00000489028 LCN10Q6JVE6 187 aa3.53□□□□□ -1.84
RFC4-213ENST00000489028 KRTAP5-11Q6L8G4 156 aa3.53□□□□□ -1.84
RFC4-213ENST00000489028 FAM171BQ6P995 826 aa3.53□□□□□ -1.84
RFC4-213ENST00000489028 SLC26A9Q7LBE3 791 aa3.53□□□□□ -1.84
RFC4-213ENST00000489028 EPHX4Q8IUS5 362 aa3.53□□□□□ -1.84
RFC4-213ENST00000489028 KLHDC8BQ8IXV7 354 aa3.53□□□□□ -1.84
RFC4-213ENST00000489028 NAXEQ8NCW5 288 aa3.53□□□□□ -1.84
RFC4-213ENST00000489028 OR52I2Q8NH67 350 aa3.53□□□□□ -1.84
RFC4-213ENST00000489028 ARHGEF26Q96DR7 871 aa3.53□□□□□ -1.84
RFC4-213ENST00000489028 TMEM68Q96MH6 324 aa3.53□□□□□ -1.84
RFC4-213ENST00000489028 POLR3CQ9BUI4 534 aaPredicted RBP3.53□□□□□ -1.84
RFC4-213ENST00000489028 PIGMQ9H3S5 423 aa3.53□□□□□ -1.84
RFC4-213ENST00000489028 RANGRFQ9HD47 186 aaPredicted RBP3.53□□□□□ -1.84
RFC4-213ENST00000489028 COPG2Q9UBF2 871 aa3.53□□□□□ -1.84
RFC4-213ENST00000489028 ERRFI1Q9UJM3 462 aaPredicted RBP3.53□□□□□ -1.84
RFC4-213ENST00000489028 FBXL2Q9UKC9 423 aa3.53□□□□□ -1.84
RFC4-213ENST00000489028 MAU2Q9Y6X3 613 aa3.53□□□□□ -1.84
RFC4-213ENST00000489028 C5orf60A6NFR6 353 aa3.52□□□□□ -1.85
RFC4-213ENST00000489028 ATP2A1O14983 1001 aa3.52□□□□□ -1.85
RFC4-213ENST00000489028 ANKRD28O15084 1053 aa3.52□□□□□ -1.85
RFC4-213ENST00000489028 ZNHIT1O43257 154 aa3.52□□□□□ -1.85
RFC4-213ENST00000489028 FAM106CPP0CH98 169 aa3.52□□□□□ -1.85
RFC4-213ENST00000489028 POLR2CP19387 275 aaPredicted RBP3.52□□□□□ -1.85
RFC4-213ENST00000489028 UGT1A1P22309 533 aa3.52□□□□□ -1.85
RFC4-213ENST00000489028 BSGP35613 385 aa3.52□□□□□ -1.85
RFC4-213ENST00000489028 RPS3AP61247 264 aaKnown RBP3.52□□□□□ -1.85
RFC4-213ENST00000489028 RPL24P83731 157 aaKnown RBP3.52□□□□□ -1.85
RFC4-213ENST00000489028 MPP1Q00013 466 aa3.52□□□□□ -1.85
RFC4-213ENST00000489028 CDC16Q13042 620 aa3.52□□□□□ -1.85
RFC4-213ENST00000489028 SIRPB2Q5JXA9 342 aa3.52□□□□□ -1.85
RFC4-213ENST00000489028 LRIF1Q5T3J3 769 aa3.52□□□□□ -1.85
RFC4-213ENST00000489028 PAPD4Q6PIY7 484 aaKnown RBP3.52□□□□□ -1.85
RFC4-213ENST00000489028 SEPT14Q6ZU15 432 aa3.52□□□□□ -1.85
RFC4-213ENST00000489028 GSTA5Q7RTV2 222 aa3.52□□□□□ -1.85
RFC4-213ENST00000489028 TRMT1LQ7Z2T5 733 aaKnown RBP3.52□□□□□ -1.85
RFC4-213ENST00000489028 GPR180Q86V85 440 aa3.52□□□□□ -1.85
RFC4-213ENST00000489028 MAP7D3Q8IWC1 876 aa3.52□□□□□ -1.85
RFC4-213ENST00000489028 SMARCE1Q969G3 411 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms