RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 ERI2A8K979 691 aaKnown RBP19.31■□□□□ 0.68
CCM2-216ENST00000488727 METTL12A8MUP2 240 aa19.31■□□□□ 0.68
CCM2-216ENST00000488727 HLA-DPA1P20036 260 aa19.31■□□□□ 0.68
CCM2-216ENST00000488727 MAT2AP31153 395 aaKnown RBP19.31■□□□□ 0.68
CCM2-216ENST00000488727 VIPR1P32241 457 aa19.31■□□□□ 0.68
CCM2-216ENST00000488727 GRIA1P42261 906 aa19.31■□□□□ 0.68
CCM2-216ENST00000488727 FBXW10Q5XX13 1052 aa19.31■□□□□ 0.68
CCM2-216ENST00000488727 STEAP4Q687X5 459 aa19.31■□□□□ 0.68
CCM2-216ENST00000488727 CRTC1Q6UUV9 634 aa19.31■□□□□ 0.68
CCM2-216ENST00000488727 UNC5AQ6ZN44 842 aa19.31■□□□□ 0.68
CCM2-216ENST00000488727 PRR23BQ6ZRT6 265 aa19.31■□□□□ 0.68
CCM2-216ENST00000488727 ARMCX6Q7L4S7 300 aa19.31■□□□□ 0.68
CCM2-216ENST00000488727 LPCAT2Q7L5N7 544 aa19.31■□□□□ 0.68
CCM2-216ENST00000488727 HORMAD1Q86X24 394 aa19.31■□□□□ 0.68
CCM2-216ENST00000488727 LRRC6Q86X45 466 aa19.31■□□□□ 0.68
CCM2-216ENST00000488727 NDUFAF2Q8N183 169 aa19.31■□□□□ 0.68
CCM2-216ENST00000488727 GSDMBQ8TAX9 411 aa19.31■□□□□ 0.68
CCM2-216ENST00000488727 TCP10LQ8TDR4 215 aa19.31■□□□□ 0.68
CCM2-216ENST00000488727 ATOH1Q92858 354 aaPredicted RBP19.31■□□□□ 0.68
CCM2-216ENST00000488727 LYSMD1Q96S90 227 aa19.31■□□□□ 0.68
CCM2-216ENST00000488727 PCED1AQ9H1Q7 454 aa19.31■□□□□ 0.68
CCM2-216ENST00000488727 VPS11Q9H270 941 aa19.31■□□□□ 0.68
CCM2-216ENST00000488727 EBF2Q9HAK2 575 aa19.31■□□□□ 0.68
CCM2-216ENST00000488727 HCN4Q9Y3Q4 1203 aa19.31■□□□□ 0.68
CCM2-216ENST00000488727 SPO11Q9Y5K1 396 aa19.31■□□□□ 0.68
CCM2-216ENST00000488727 FAM159BA6NKW6 160 aa19.3■□□□□ 0.68
CCM2-216ENST00000488727 LATO43561 262 aa19.3■□□□□ 0.68
CCM2-216ENST00000488727 MMP20O60882 483 aa19.3■□□□□ 0.68
CCM2-216ENST00000488727 FGF1P05230 155 aa19.3■□□□□ 0.68
CCM2-216ENST00000488727 DHRS4L1P0CG22 281 aa19.3■□□□□ 0.68
CCM2-216ENST00000488727 DNAJC3Q13217 504 aa19.3■□□□□ 0.68
CCM2-216ENST00000488727 FGL2Q14314 439 aa19.3■□□□□ 0.68
CCM2-216ENST00000488727 CNGA3Q16281 694 aa19.3■□□□□ 0.68
CCM2-216ENST00000488727 LPAL2Q16609 132 aa19.3■□□□□ 0.68
CCM2-216ENST00000488727 CDKN3Q16667 212 aa19.3■□□□□ 0.68
CCM2-216ENST00000488727 ZNF284Q2VY69 593 aa19.3■□□□□ 0.68
CCM2-216ENST00000488727 KIAA1161Q6NSJ0 714 aa19.3■□□□□ 0.68
CCM2-216ENST00000488727 LIPIQ6XZB0 460 aa19.3■□□□□ 0.68
CCM2-216ENST00000488727 CXorf40AQ8TE69 158 aa19.3■□□□□ 0.68
CCM2-216ENST00000488727 KLK6Q92876 244 aa19.3■□□□□ 0.68
CCM2-216ENST00000488727 SLC40A1Q9NP59 571 aa19.3■□□□□ 0.68
CCM2-216ENST00000488727 PIH1D1Q9NWS0 290 aaKnown RBP19.3■□□□□ 0.68
CCM2-216ENST00000488727 MKS1Q9NXB0 559 aa19.3■□□□□ 0.68
CCM2-216ENST00000488727 SCN8AQ9UQD0 1980 aa19.29■□□□□ 0.68
CCM2-216ENST00000488727 IGLON5A6NGN9 336 aa19.29■□□□□ 0.68
CCM2-216ENST00000488727 PSMD3O43242 534 aa19.29■□□□□ 0.68
CCM2-216ENST00000488727 PIAS1O75925 651 aa19.29■□□□□ 0.68
CCM2-216ENST00000488727 UBOX5O94941 541 aa19.29■□□□□ 0.68
CCM2-216ENST00000488727 CYP2A6P11509 494 aaPredicted RBP19.29■□□□□ 0.68
CCM2-216ENST00000488727 C6P13671 934 aa19.29■□□□□ 0.68
CCM2-216ENST00000488727 GM2AP17900 193 aa19.29■□□□□ 0.68
CCM2-216ENST00000488727 ADRA1DP25100 572 aa19.29■□□□□ 0.68
CCM2-216ENST00000488727 CCR5P51681 352 aa19.29■□□□□ 0.68
CCM2-216ENST00000488727 RPS21P63220 83 aaKnown RBP19.29■□□□□ 0.68
CCM2-216ENST00000488727 SF3A3Q12874 501 aaKnown RBP eCLIP19.29■□□□□ 0.68
CCM2-216ENST00000488727 SEPT7Q16181 437 aaKnown RBP19.29■□□□□ 0.68
CCM2-216ENST00000488727 LGSNQ5TDP6 509 aa19.29■□□□□ 0.68
CCM2-216ENST00000488727 LRRC66Q68CR7 880 aa19.29■□□□□ 0.68
CCM2-216ENST00000488727 NAPEPLDQ6IQ20 393 aa19.29■□□□□ 0.68
CCM2-216ENST00000488727 FAM47EQ6ZV65 393 aa19.29■□□□□ 0.68
CCM2-216ENST00000488727 ZNF75CPQ92670 426 aaPredicted RBP19.29■□□□□ 0.68
CCM2-216ENST00000488727 SERAC1Q96JX3 654 aa19.29■□□□□ 0.68
CCM2-216ENST00000488727 ORAI3Q9BRQ5 295 aa19.29■□□□□ 0.68
CCM2-216ENST00000488727 ARNT2Q9HBZ2 717 aa19.29■□□□□ 0.68
CCM2-216ENST00000488727 COQ6Q9Y2Z9 468 aa19.29■□□□□ 0.68
CCM2-216ENST00000488727 SLCO1B1Q9Y6L6 691 aa19.29■□□□□ 0.68
CCM2-216ENST00000488727 KRT37O76014 449 aa19.28■□□□□ 0.68
CCM2-216ENST00000488727 SNRPAP09012 282 aaKnown RBP19.28■□□□□ 0.68
CCM2-216ENST00000488727 ELFN1P0C7U0 828 aa19.28■□□□□ 0.68
CCM2-216ENST00000488727 NFKBIAP25963 317 aa19.28■□□□□ 0.68
CCM2-216ENST00000488727 CCNFP41002 786 aa19.28■□□□□ 0.68
CCM2-216ENST00000488727 ETV4P43268 484 aa19.28■□□□□ 0.68
CCM2-216ENST00000488727 DHPSP49366 369 aaPredicted RBP19.28■□□□□ 0.68
CCM2-216ENST00000488727 MSLNQ13421 630 aaPredicted RBP19.28■□□□□ 0.68
CCM2-216ENST00000488727 LRRC8BQ6P9F7 803 aa19.28■□□□□ 0.68
CCM2-216ENST00000488727 CBARPQ8N350 705 aaPredicted RBP19.28■□□□□ 0.68
CCM2-216ENST00000488727 PPM1NQ8N819 430 aa19.28■□□□□ 0.68
CCM2-216ENST00000488727 FOXJ1Q92949 421 aa19.28■□□□□ 0.68
CCM2-216ENST00000488727 EID2BQ96D98 161 aa19.28■□□□□ 0.68
CCM2-216ENST00000488727 MTBPQ96DY7 904 aa19.28■□□□□ 0.68
CCM2-216ENST00000488727 C1QTNF2Q9BXJ5 285 aa19.28■□□□□ 0.68
CCM2-216ENST00000488727 IRF2BPLQ9H1B7 796 aa19.28■□□□□ 0.68
CCM2-216ENST00000488727 MAGEE1Q9HCI5 957 aa19.28■□□□□ 0.68
CCM2-216ENST00000488727 RAPGEFL1Q9UHV5 662 aa19.28■□□□□ 0.68
CCM2-216ENST00000488727 C1orf232A0A0U1RR37 186 aa19.28■□□□□ 0.68
CCM2-216ENST00000488727 CFAP73A6NFT4 308 aa19.28■□□□□ 0.68
CCM2-216ENST00000488727 MEI4A8MW99 385 aa19.28■□□□□ 0.68
CCM2-216ENST00000488727 AURKAO14965 403 aa19.28■□□□□ 0.68
CCM2-216ENST00000488727 CLDN7O95471 211 aa19.28■□□□□ 0.68
CCM2-216ENST00000488727 MAOBP27338 520 aa19.28■□□□□ 0.68
CCM2-216ENST00000488727 PTSQ03393 145 aa19.28■□□□□ 0.68
CCM2-216ENST00000488727 MGAT5Q09328 741 aa19.28■□□□□ 0.68
CCM2-216ENST00000488727 BNIP1Q12981 228 aa19.28■□□□□ 0.68
CCM2-216ENST00000488727 LYSMD3Q7Z3D4 306 aa19.28■□□□□ 0.68
CCM2-216ENST00000488727 CCNJLQ8IV13 435 aa19.28■□□□□ 0.68
CCM2-216ENST00000488727 OR52K1Q8NGK4 314 aa19.28■□□□□ 0.68
CCM2-216ENST00000488727 SNX19Q92543 992 aa19.28■□□□□ 0.68
CCM2-216ENST00000488727 RMDN2Q96LZ7 410 aa19.28■□□□□ 0.68
CCM2-216ENST00000488727 SMYD2Q9NRG4 433 aa19.28■□□□□ 0.68
CCM2-216ENST00000488727 ZNF711Q9Y462 761 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms