RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 CFAP77Q6ZQR2 320 aa3.24□□□□□ -1.89
CD46-215ENST00000488596 SDCCAG8Q86SQ7 713 aaPredicted RBP3.24□□□□□ -1.89
CD46-215ENST00000488596 ZNF329Q86UD4 541 aa3.24□□□□□ -1.89
CD46-215ENST00000488596 RPAP2Q8IXW5 612 aaPredicted RBP3.24□□□□□ -1.89
CD46-215ENST00000488596 TAGAPQ8N103 731 aa3.24□□□□□ -1.89
CD46-215ENST00000488596 BEST3Q8N1M1 668 aa3.24□□□□□ -1.89
CD46-215ENST00000488596 CLIP4Q8N3C7 705 aa3.24□□□□□ -1.89
CD46-215ENST00000488596 C1orf131Q8NDD1 294 aaKnown RBP3.24□□□□□ -1.89
CD46-215ENST00000488596 ELP5Q8TE02 316 aa3.24□□□□□ -1.89
CD46-215ENST00000488596 APBB2Q92870 758 aa3.24□□□□□ -1.89
CD46-215ENST00000488596 SAT2Q96F10 170 aaPredicted RBP3.24□□□□□ -1.89
CD46-215ENST00000488596 SCMH1Q96GD3 660 aa3.24□□□□□ -1.89
CD46-215ENST00000488596 EGLN2Q96KS0 407 aa3.24□□□□□ -1.89
CD46-215ENST00000488596 PCYT2Q99447 389 aa3.24□□□□□ -1.89
CD46-215ENST00000488596 SEPT5Q99719 369 aaPredicted RBP3.24□□□□□ -1.89
CD46-215ENST00000488596 CMKLR1Q99788 373 aa3.24□□□□□ -1.89
CD46-215ENST00000488596 PIGMQ9H3S5 423 aa3.24□□□□□ -1.89
CD46-215ENST00000488596 CD93Q9NPY3 652 aa3.24□□□□□ -1.89
CD46-215ENST00000488596 MTMR10Q9NXD2 777 aa3.24□□□□□ -1.89
CD46-215ENST00000488596 OGFRQ9NZT2 677 aa3.24□□□□□ -1.89
CD46-215ENST00000488596 SUCLA2Q9P2R7 463 aaPredicted RBP3.24□□□□□ -1.89
CD46-215ENST00000488596 OR14J1Q9UGF5 321 aa3.24□□□□□ -1.89
CD46-215ENST00000488596 RPS6KA6Q9UK32 745 aa3.24□□□□□ -1.89
CD46-215ENST00000488596 M0QZ24 198 aa3.23□□□□□ -1.89
CD46-215ENST00000488596 GRID2O43424 1007 aa3.23□□□□□ -1.89
CD46-215ENST00000488596 GPC4O75487 556 aa3.23□□□□□ -1.89
CD46-215ENST00000488596 TSPAN9O75954 239 aa3.23□□□□□ -1.89
CD46-215ENST00000488596 BEST1O76090 585 aa3.23□□□□□ -1.89
CD46-215ENST00000488596 CAMTA2O94983 1202 aa3.23□□□□□ -1.89
CD46-215ENST00000488596 CLDN14O95500 239 aa3.23□□□□□ -1.89
CD46-215ENST00000488596 ICAM1P05362 532 aa3.23□□□□□ -1.89
CD46-215ENST00000488596 SELLP14151 372 aa3.23□□□□□ -1.89
CD46-215ENST00000488596 KCNJ4P48050 445 aa3.23□□□□□ -1.89
CD46-215ENST00000488596 HNRNPH2P55795 449 aaKnown RBP3.23□□□□□ -1.89
CD46-215ENST00000488596 DSCR9P59020 149 aa3.23□□□□□ -1.89
CD46-215ENST00000488596 BRWD1-AS2P59051 145 aa3.23□□□□□ -1.89
CD46-215ENST00000488596 CSNK2A1P68400 391 aaPredicted RBP3.23□□□□□ -1.89
CD46-215ENST00000488596 ACSM2AQ08AH3 577 aa3.23□□□□□ -1.89
CD46-215ENST00000488596 MYBPHQ13203 477 aa3.23□□□□□ -1.89
CD46-215ENST00000488596 ACVR2BQ13705 512 aa3.23□□□□□ -1.89
CD46-215ENST00000488596 DLG2Q15700 870 aa3.23□□□□□ -1.89
CD46-215ENST00000488596 CTF1Q16619 201 aa3.23□□□□□ -1.89
CD46-215ENST00000488596 PNLIPRP3Q17RR3 467 aa3.23□□□□□ -1.89
CD46-215ENST00000488596 ACSM2BQ68CK6 577 aa3.23□□□□□ -1.89
CD46-215ENST00000488596 RHBDF2Q6PJF5 856 aa3.23□□□□□ -1.89
CD46-215ENST00000488596 ENOSF1Q7L5Y1 443 aa3.23□□□□□ -1.89
CD46-215ENST00000488596 RNF168Q8IYW5 571 aaPredicted RBP3.23□□□□□ -1.89
CD46-215ENST00000488596 ZNF34Q8IZ26 560 aa3.23□□□□□ -1.89
CD46-215ENST00000488596 CSNK2A3Q8NEV1 391 aa3.23□□□□□ -1.89
CD46-215ENST00000488596 OR2AK2Q8NG84 335 aa3.23□□□□□ -1.89
CD46-215ENST00000488596 HM13Q8TCT9 377 aa3.23□□□□□ -1.89
CD46-215ENST00000488596 PGAM5Q96HS1 289 aa3.23□□□□□ -1.89
CD46-215ENST00000488596 C3orf30Q96M34 536 aa3.23□□□□□ -1.89
CD46-215ENST00000488596 SMC6Q96SB8 1091 aa3.23□□□□□ -1.89
CD46-215ENST00000488596 SH3GL2Q99962 352 aa3.23□□□□□ -1.89
CD46-215ENST00000488596 NUDT16L1Q9BRJ7 211 aaKnown RBP3.23□□□□□ -1.89
CD46-215ENST00000488596 MAK16Q9BXY0 300 aaKnown RBP3.23□□□□□ -1.89
CD46-215ENST00000488596 C17orf75Q9HAS0 396 aa3.23□□□□□ -1.89
CD46-215ENST00000488596 LTB4R2Q9NPC1 389 aa3.23□□□□□ -1.89
CD46-215ENST00000488596 PAG1Q9NWQ8 432 aa3.23□□□□□ -1.89
CD46-215ENST00000488596 NSMCE4AQ9NXX6 385 aa3.23□□□□□ -1.89
CD46-215ENST00000488596 CWC15Q9P013 229 aaKnown RBP3.23□□□□□ -1.89
CD46-215ENST00000488596 KCNS2Q9ULS6 477 aa3.23□□□□□ -1.89
CD46-215ENST00000488596 A0A0U1RQJ8 604 aa3.22□□□□□ -1.89
CD46-215ENST00000488596 CLEC18AA5D8T8 446 aa3.22□□□□□ -1.89
CD46-215ENST00000488596 A8MV72 311 aaPredicted RBP3.22□□□□□ -1.89
CD46-215ENST00000488596 B4DLN1 442 aa3.22□□□□□ -1.89
CD46-215ENST00000488596 CTDSP2O14595 271 aa3.22□□□□□ -1.89
CD46-215ENST00000488596 PLPP2O43688 288 aa3.22□□□□□ -1.89
CD46-215ENST00000488596 KDM4BO94953 1096 aa3.22□□□□□ -1.89
CD46-215ENST00000488596 HIST1H2ABP04908 130 aa3.22□□□□□ -1.89
CD46-215ENST00000488596 SRPRAP08240 638 aaKnown RBP3.22□□□□□ -1.89
CD46-215ENST00000488596 DDX5P17844 614 aaKnown RBP3.22□□□□□ -1.89
CD46-215ENST00000488596 HIST1H2ADP20671 130 aa3.22□□□□□ -1.89
CD46-215ENST00000488596 ACADLP28330 430 aa3.22□□□□□ -1.89
CD46-215ENST00000488596 SUOXP51687 545 aa3.22□□□□□ -1.89
CD46-215ENST00000488596 MRPL12P52815 198 aaKnown RBP3.22□□□□□ -1.89
CD46-215ENST00000488596 RAD23BP54727 409 aa3.22□□□□□ -1.89
CD46-215ENST00000488596 MFAP4P55083 255 aa3.22□□□□□ -1.89
CD46-215ENST00000488596 PPP2R2BQ00005 443 aa3.22□□□□□ -1.89
CD46-215ENST00000488596 EGR4Q05215 589 aa3.22□□□□□ -1.89
CD46-215ENST00000488596 FOXM1Q08050 763 aa3.22□□□□□ -1.89
CD46-215ENST00000488596 STK4Q13043 487 aa3.22□□□□□ -1.89
CD46-215ENST00000488596 AIMP2Q13155 320 aaKnown RBP3.22□□□□□ -1.89
CD46-215ENST00000488596 SETMARQ53H47 684 aaPredicted RBP3.22□□□□□ -1.89
CD46-215ENST00000488596 SOWAHCQ53LP3 525 aaPredicted RBP3.22□□□□□ -1.89
CD46-215ENST00000488596 ZNF805Q5CZA5 627 aa3.22□□□□□ -1.89
CD46-215ENST00000488596 PPP6R3Q5H9R7 873 aaPredicted RBP3.22□□□□□ -1.89
CD46-215ENST00000488596 KCNT1Q5JUK3 1230 aa3.22□□□□□ -1.89
CD46-215ENST00000488596 EFHC1Q5JVL4 640 aa3.22□□□□□ -1.89
CD46-215ENST00000488596 PLEKHS1Q5SXH7 462 aa3.22□□□□□ -1.89
CD46-215ENST00000488596 CFAP58Q5T655 872 aa3.22□□□□□ -1.89
CD46-215ENST00000488596 NSUN5P2Q63ZY6 315 aa3.22□□□□□ -1.89
CD46-215ENST00000488596 RGMBQ6NW40 437 aa3.22□□□□□ -1.89
CD46-215ENST00000488596 C8orf82Q6P1X6 216 aaPredicted RBP3.22□□□□□ -1.89
CD46-215ENST00000488596 KCTD18Q6PI47 426 aaPredicted RBP3.22□□□□□ -1.89
CD46-215ENST00000488596 HIST3H2AQ7L7L0 130 aa3.22□□□□□ -1.89
CD46-215ENST00000488596 CACNA2D4Q7Z3S7 1137 aa3.22□□□□□ -1.89
CD46-215ENST00000488596 AACSQ86V21 672 aa3.22□□□□□ -1.89
CD46-215ENST00000488596 CHERPQ8IWX8 916 aaKnown RBP3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms