RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 RBFAQ8N0V3 343 aa10.98□□□□□ -0.65
HDLBP-242ENST00000488013 GOLGA6L1Q8N7Z2 621 aa10.98□□□□□ -0.65
HDLBP-242ENST00000488013 PPM1NQ8N819 430 aa10.98□□□□□ -0.65
HDLBP-242ENST00000488013 C2CD4AQ8NCU7 369 aaPredicted RBP10.98□□□□□ -0.65
HDLBP-242ENST00000488013 GPR26Q8NDV2 337 aa10.98□□□□□ -0.65
HDLBP-242ENST00000488013 MTBPQ96DY7 904 aa10.98□□□□□ -0.65
HDLBP-242ENST00000488013 ERLEC1Q96DZ1 483 aa10.98□□□□□ -0.65
HDLBP-242ENST00000488013 DCUN1D1Q96GG9 259 aa10.98□□□□□ -0.65
HDLBP-242ENST00000488013 ZNF514Q96K75 400 aaPredicted RBP10.98□□□□□ -0.65
HDLBP-242ENST00000488013 SMIM14Q96QK8 99 aa10.98□□□□□ -0.65
HDLBP-242ENST00000488013 RIOK2Q9BVS4 552 aaKnown RBP10.98□□□□□ -0.65
HDLBP-242ENST00000488013 SLC6A17Q9H1V8 727 aa10.98□□□□□ -0.65
HDLBP-242ENST00000488013 ABCG8Q9H221 673 aa10.98□□□□□ -0.65
HDLBP-242ENST00000488013 EPB41L4BQ9H329 900 aa10.98□□□□□ -0.65
HDLBP-242ENST00000488013 PLAC1Q9HBJ0 212 aa10.98□□□□□ -0.65
HDLBP-242ENST00000488013 IARS2Q9NSE4 1012 aaKnown RBP10.98□□□□□ -0.65
HDLBP-242ENST00000488013 CRLS1Q9UJA2 301 aa10.98□□□□□ -0.65
HDLBP-242ENST00000488013 CYP8B1Q9UNU6 501 aa10.98□□□□□ -0.65
HDLBP-242ENST00000488013 ITM2BQ9Y287 266 aa10.98□□□□□ -0.65
HDLBP-242ENST00000488013 NCOR1O75376 2440 aa10.97□□□□□ -0.65
HDLBP-242ENST00000488013 TTC28Q96AY4 2481 aa10.97□□□□□ -0.65
HDLBP-242ENST00000488013 IGHV1OR15-9A0A0B4J2B8 117 aa10.97□□□□□ -0.65
HDLBP-242ENST00000488013 TRBV5-4A0A0C4DH59 114 aa10.97□□□□□ -0.65
HDLBP-242ENST00000488013 IQANK1A0A1B0GTG1 560 aa10.97□□□□□ -0.65
HDLBP-242ENST00000488013 CCDC78A2IDD5 438 aa10.97□□□□□ -0.65
HDLBP-242ENST00000488013 PRAMEF26H0Y7S4 382 aa10.97□□□□□ -0.65
HDLBP-242ENST00000488013 BUD23O43709 281 aaKnown RBP10.97□□□□□ -0.65
HDLBP-242ENST00000488013 HOXC4P09017 264 aaPredicted RBP10.97□□□□□ -0.65
HDLBP-242ENST00000488013 MYZAPP0CAP1 466 aa10.97□□□□□ -0.65
HDLBP-242ENST00000488013 HNRNPA2B1P22626 353 aaKnown RBP10.97□□□□□ -0.65
HDLBP-242ENST00000488013 KELP23276 732 aa10.97□□□□□ -0.65
HDLBP-242ENST00000488013 FOXN2P32314 431 aa10.97□□□□□ -0.65
HDLBP-242ENST00000488013 ACSL1P33121 698 aa10.97□□□□□ -0.65
HDLBP-242ENST00000488013 SPRP35270 261 aaPredicted RBP10.97□□□□□ -0.65
HDLBP-242ENST00000488013 DPP6P42658 865 aa10.97□□□□□ -0.65
HDLBP-242ENST00000488013 NSG1P42857 185 aa10.97□□□□□ -0.65
HDLBP-242ENST00000488013 GPR1P46091 355 aa10.97□□□□□ -0.65
HDLBP-242ENST00000488013 LEPRP48357 1165 aaKnown RBP10.97□□□□□ -0.65
HDLBP-242ENST00000488013 CD151P48509 253 aa10.97□□□□□ -0.65
HDLBP-242ENST00000488013 OVGP1Q12889 678 aa10.97□□□□□ -0.65
HDLBP-242ENST00000488013 PEX6Q13608 980 aa10.97□□□□□ -0.65
HDLBP-242ENST00000488013 CHRNA6Q15825 494 aa10.97□□□□□ -0.65
HDLBP-242ENST00000488013 PNCKQ6P2M8 343 aa10.97□□□□□ -0.65
HDLBP-242ENST00000488013 PHYKPLQ8IUZ5 450 aa10.97□□□□□ -0.65
HDLBP-242ENST00000488013 NXPE1Q8N323 547 aa10.97□□□□□ -0.65
HDLBP-242ENST00000488013 BTN2A2Q8WVV5 523 aa10.97□□□□□ -0.65
HDLBP-242ENST00000488013 SLC44A1Q8WWI5 657 aa10.97□□□□□ -0.65
HDLBP-242ENST00000488013 SKA1Q96BD8 255 aa10.97□□□□□ -0.65
HDLBP-242ENST00000488013 COPS8Q99627 209 aa10.97□□□□□ -0.65
HDLBP-242ENST00000488013 TSSK1BQ9BXA7 367 aa10.97□□□□□ -0.65
HDLBP-242ENST00000488013 CCDC68Q9H2F9 335 aa10.97□□□□□ -0.65
HDLBP-242ENST00000488013 RHOJQ9H4E5 214 aa10.97□□□□□ -0.65
HDLBP-242ENST00000488013 SUDS3Q9H7L9 328 aaPredicted RBP10.97□□□□□ -0.65
HDLBP-242ENST00000488013 PHPT1Q9NRX4 125 aaPredicted RBP10.97□□□□□ -0.65
HDLBP-242ENST00000488013 PSMC3IPQ9P2W1 217 aaPredicted RBP10.97□□□□□ -0.65
HDLBP-242ENST00000488013 PLAAQ9Y263 795 aa10.97□□□□□ -0.65
HDLBP-242ENST00000488013 PCDHB1Q9Y5F3 818 aa10.97□□□□□ -0.65
HDLBP-242ENST00000488013 HS3ST3A1Q9Y663 406 aa10.97□□□□□ -0.65
HDLBP-242ENST00000488013 KLHL33A6NCF5 533 aa10.96□□□□□ -0.65
HDLBP-242ENST00000488013 METTL12A8MUP2 240 aa10.96□□□□□ -0.65
HDLBP-242ENST00000488013 PRR33A8MZF0 331 aa10.96□□□□□ -0.65
HDLBP-242ENST00000488013 C10orf142B7Z368 130 aa10.96□□□□□ -0.65
HDLBP-242ENST00000488013 MAP2K7O14733 419 aa10.96□□□□□ -0.65
HDLBP-242ENST00000488013 PRMT5O14744 637 aaPredicted RBP10.96□□□□□ -0.65
HDLBP-242ENST00000488013 FPGTO14772 594 aa10.96□□□□□ -0.65
HDLBP-242ENST00000488013 VEGFDO43915 354 aa10.96□□□□□ -0.65
HDLBP-242ENST00000488013 MAGEC1O60732 1142 aa10.96□□□□□ -0.65
HDLBP-242ENST00000488013 AP2A2O94973 939 aa10.96□□□□□ -0.65
HDLBP-242ENST00000488013 PAK4O96013 591 aaPredicted RBP10.96□□□□□ -0.65
HDLBP-242ENST00000488013 ESR1P03372 595 aa10.96□□□□□ -0.65
HDLBP-242ENST00000488013 GSTM1P09488 218 aa10.96□□□□□ -0.65
HDLBP-242ENST00000488013 RPS3P23396 243 aaKnown RBP eCLIP10.96□□□□□ -0.65
HDLBP-242ENST00000488013 ACRV1P26436 265 aa10.96□□□□□ -0.65
HDLBP-242ENST00000488013 AVPR2P30518 371 aa10.96□□□□□ -0.65
HDLBP-242ENST00000488013 TRIM23P36406 574 aa10.96□□□□□ -0.65
HDLBP-242ENST00000488013 YPEL5P62699 121 aa10.96□□□□□ -0.65
HDLBP-242ENST00000488013 SEMG2Q02383 582 aa10.96□□□□□ -0.65
HDLBP-242ENST00000488013 GSTM4Q03013 218 aa10.96□□□□□ -0.65
HDLBP-242ENST00000488013 PTPRCAPQ14761 206 aa10.96□□□□□ -0.65
HDLBP-242ENST00000488013 PTPRRQ15256 657 aa10.96□□□□□ -0.65
HDLBP-242ENST00000488013 WSCD2Q2TBF2 565 aa10.96□□□□□ -0.65
HDLBP-242ENST00000488013 WDR45BQ5MNZ6 344 aa10.96□□□□□ -0.65
HDLBP-242ENST00000488013 SEL1L3Q68CR1 1132 aa10.96□□□□□ -0.65
HDLBP-242ENST00000488013 RAET1GQ6H3X3 334 aa10.96□□□□□ -0.65
HDLBP-242ENST00000488013 ADGRD1Q6QNK2 874 aa10.96□□□□□ -0.65
HDLBP-242ENST00000488013 PACS1Q6VY07 963 aa10.96□□□□□ -0.65
HDLBP-242ENST00000488013 STRA8Q7Z7C7 330 aa10.96□□□□□ -0.65
HDLBP-242ENST00000488013 SERPINA9Q86WD7 417 aa10.96□□□□□ -0.65
HDLBP-242ENST00000488013 DCP2Q8IU60 420 aaKnown RBP10.96□□□□□ -0.65
HDLBP-242ENST00000488013 DDHD1Q8NEL9 900 aa10.96□□□□□ -0.65
HDLBP-242ENST00000488013 SCAMP4Q969E2 229 aa10.96□□□□□ -0.65
HDLBP-242ENST00000488013 GLYATL1Q969I3 302 aa10.96□□□□□ -0.65
HDLBP-242ENST00000488013 CENPTQ96BT3 561 aa10.96□□□□□ -0.65
HDLBP-242ENST00000488013 TSPAN17Q96FV3 270 aa10.96□□□□□ -0.65
HDLBP-242ENST00000488013 VPS39Q96JC1 886 aa10.96□□□□□ -0.65
HDLBP-242ENST00000488013 PAFAH2Q99487 392 aa10.96□□□□□ -0.65
HDLBP-242ENST00000488013 PRRX2Q99811 253 aa10.96□□□□□ -0.65
HDLBP-242ENST00000488013 TRIM56Q9BRZ2 755 aaKnown RBP10.96□□□□□ -0.65
HDLBP-242ENST00000488013 DHRS4Q9BTZ2 278 aa10.96□□□□□ -0.65
HDLBP-242ENST00000488013 GPR174Q9BXC1 333 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms