RNA–Protein interactions for RNA: ENST00000487939.1

PTEN-204, Transcript of phosphatase and tensin homolog, humanhuman

TSL 3

Gene PTEN, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTEN-204ENST00000487939 PKP4Q99569 1192 aa4.36□□□□□ -1.71
PTEN-204ENST00000487939 CHMP4AQ9BY43 222 aa4.36□□□□□ -1.71
PTEN-204ENST00000487939 PDZD7Q9H5P4 517 aa4.36□□□□□ -1.71
PTEN-204ENST00000487939 MAGIXQ9H6Y5 334 aa4.36□□□□□ -1.71
PTEN-204ENST00000487939 PLEKHA5Q9HAU0 1116 aa4.36□□□□□ -1.71
PTEN-204ENST00000487939 SEBOXQ9HB31 216 aaPredicted RBP4.36□□□□□ -1.71
PTEN-204ENST00000487939 OR14J1Q9UGF5 321 aa4.36□□□□□ -1.71
PTEN-204ENST00000487939 FBXW11Q9UKB1 542 aa4.36□□□□□ -1.71
PTEN-204ENST00000487939 ITIH6Q6UXX5 1313 aa4.36□□□□□ -1.71
PTEN-204ENST00000487939 KANSL1LA0AUZ9 987 aa4.35□□□□□ -1.71
PTEN-204ENST00000487939 C1orf226A1L170 272 aa4.35□□□□□ -1.71
PTEN-204ENST00000487939 PGPEP1LA6NFU8 196 aa4.35□□□□□ -1.71
PTEN-204ENST00000487939 CAMTA2O94983 1202 aa4.35□□□□□ -1.71
PTEN-204ENST00000487939 ACADMP11310 421 aa4.35□□□□□ -1.71
PTEN-204ENST00000487939 TMEM11P17152 192 aa4.35□□□□□ -1.71
PTEN-204ENST00000487939 PPARGP37231 505 aaPredicted RBP4.35□□□□□ -1.71
PTEN-204ENST00000487939 RELQ04864 619 aaPredicted RBP4.35□□□□□ -1.71
PTEN-204ENST00000487939 EIF4A2Q14240 407 aaKnown RBP4.35□□□□□ -1.71
PTEN-204ENST00000487939 ZRSR1Q15695 479 aaKnown RBP4.35□□□□□ -1.71
PTEN-204ENST00000487939 PNLIPRP3Q17RR3 467 aa4.35□□□□□ -1.71
PTEN-204ENST00000487939 FAM180BQ6P0A1 224 aa4.35□□□□□ -1.71
PTEN-204ENST00000487939 GFRALQ6UXV0 394 aa4.35□□□□□ -1.71
PTEN-204ENST00000487939 GLDNQ6ZMI3 551 aaPredicted RBP4.35□□□□□ -1.71
PTEN-204ENST00000487939 ODF3L1Q8IXM7 274 aa4.35□□□□□ -1.71
PTEN-204ENST00000487939 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.35□□□□□ -1.71
PTEN-204ENST00000487939 C1orf87Q8N0U7 546 aa4.35□□□□□ -1.71
PTEN-204ENST00000487939 MAB21L3Q8N8X9 362 aa4.35□□□□□ -1.71
PTEN-204ENST00000487939 DUSP19Q8WTR2 217 aa4.35□□□□□ -1.71
PTEN-204ENST00000487939 PIGTQ969N2 578 aa4.35□□□□□ -1.71
PTEN-204ENST00000487939 C1orf74Q96LT6 269 aa4.35□□□□□ -1.71
PTEN-204ENST00000487939 WDFY2Q96P53 400 aa4.35□□□□□ -1.71
PTEN-204ENST00000487939 SH2D4AQ9H788 454 aa4.35□□□□□ -1.71
PTEN-204ENST00000487939 FKRPQ9H9S5 495 aa4.35□□□□□ -1.71
PTEN-204ENST00000487939 STK39Q9UEW8 545 aa4.35□□□□□ -1.71
PTEN-204ENST00000487939 FBXL2Q9UKC9 423 aa4.35□□□□□ -1.71
PTEN-204ENST00000487939 LYVE1Q9Y5Y7 322 aa4.35□□□□□ -1.71
PTEN-204ENST00000487939 PTPRCP08575 1304 aa4.35□□□□□ -1.71
PTEN-204ENST00000487939 PI4KAP2A4QPH2 592 aa4.34□□□□□ -1.71
PTEN-204ENST00000487939 KCNN4O15554 427 aa4.34□□□□□ -1.71
PTEN-204ENST00000487939 ACTN1P12814 892 aa4.34□□□□□ -1.71
PTEN-204ENST00000487939 CDH1P12830 882 aa4.34□□□□□ -1.71
PTEN-204ENST00000487939 CORO1AP31146 461 aaKnown RBP4.34□□□□□ -1.71
PTEN-204ENST00000487939 CLCN3P51790 818 aa4.34□□□□□ -1.71
PTEN-204ENST00000487939 ZNF132P52740 706 aa4.34□□□□□ -1.71
PTEN-204ENST00000487939 TERF1P54274 439 aa4.34□□□□□ -1.71
PTEN-204ENST00000487939 TAS2R40P59535 323 aa4.34□□□□□ -1.71
PTEN-204ENST00000487939 ARF3P61204 181 aaPredicted RBP4.34□□□□□ -1.71
PTEN-204ENST00000487939 ARF1P84077 181 aaKnown RBP4.34□□□□□ -1.71
PTEN-204ENST00000487939 ILF3Q12906 894 aaKnown RBP eCLIP4.34□□□□□ -1.71
PTEN-204ENST00000487939 PDE1CQ14123 709 aaPredicted RBP4.34□□□□□ -1.71
PTEN-204ENST00000487939 CRYMQ14894 314 aa4.34□□□□□ -1.71
PTEN-204ENST00000487939 ZSCAN23Q3MJ62 389 aa4.34□□□□□ -1.71
PTEN-204ENST00000487939 ACCSLQ4AC99 568 aa4.34□□□□□ -1.71
PTEN-204ENST00000487939 TMEM35AQ53FP2 167 aa4.34□□□□□ -1.71
PTEN-204ENST00000487939 ZNF805Q5CZA5 627 aa4.34□□□□□ -1.71
PTEN-204ENST00000487939 CCDC30Q5VVM6 783 aa4.34□□□□□ -1.71
PTEN-204ENST00000487939 SNX30Q5VWJ9 437 aa4.34□□□□□ -1.71
PTEN-204ENST00000487939 ZNF280DQ6N043 979 aa4.34□□□□□ -1.71
PTEN-204ENST00000487939 TMEM219Q86XT9 240 aa4.34□□□□□ -1.71
PTEN-204ENST00000487939 TICAM1Q8IUC6 712 aa4.34□□□□□ -1.71
PTEN-204ENST00000487939 MUC20Q8N307 709 aaPredicted RBP4.34□□□□□ -1.71
PTEN-204ENST00000487939 OR1J2Q8NGS2 313 aa4.34□□□□□ -1.71
PTEN-204ENST00000487939 SPATA20Q8TB22 786 aa4.34□□□□□ -1.71
PTEN-204ENST00000487939 SLC20A1Q8WUM9 679 aa4.34□□□□□ -1.71
PTEN-204ENST00000487939 SKA1Q96BD8 255 aa4.34□□□□□ -1.71
PTEN-204ENST00000487939 MOAP1Q96BY2 351 aa4.34□□□□□ -1.71
PTEN-204ENST00000487939 TTC14Q96N46 770 aa4.34□□□□□ -1.71
PTEN-204ENST00000487939 KAT14Q9H8E8 782 aa4.34□□□□□ -1.71
PTEN-204ENST00000487939 HCFC1R1Q9NWW0 138 aa4.34□□□□□ -1.71
PTEN-204ENST00000487939 CORO1CQ9ULV4 474 aaPredicted RBP4.34□□□□□ -1.71
PTEN-204ENST00000487939 R3HDM2Q9Y2K5 976 aaKnown RBP4.34□□□□□ -1.71
PTEN-204ENST00000487939 KLHL20Q9Y2M5 609 aa4.34□□□□□ -1.71
PTEN-204ENST00000487939 CLIC4Q9Y696 253 aa4.34□□□□□ -1.71
PTEN-204ENST00000487939 A0A1W2PS18 150 aa4.33□□□□□ -1.72
PTEN-204ENST00000487939 IFITM10A6NMD0 228 aa4.33□□□□□ -1.72
PTEN-204ENST00000487939 EIF4E1BA6NMX2 242 aaKnown RBP4.33□□□□□ -1.72
PTEN-204ENST00000487939 MYO1GB0I1T2 1018 aa4.33□□□□□ -1.72
PTEN-204ENST00000487939 SH3BP5O60239 455 aa4.33□□□□□ -1.72
PTEN-204ENST00000487939 USO1O60763 962 aaKnown RBP4.33□□□□□ -1.72
PTEN-204ENST00000487939 DDNO94850 711 aaPredicted RBP4.33□□□□□ -1.72
PTEN-204ENST00000487939 ZNF432O94892 652 aa4.33□□□□□ -1.72
PTEN-204ENST00000487939 HIST1H2ABP04908 130 aa4.33□□□□□ -1.72
PTEN-204ENST00000487939 HIST1H2ADP20671 130 aa4.33□□□□□ -1.72
PTEN-204ENST00000487939 DLX5P56178 289 aa4.33□□□□□ -1.72
PTEN-204ENST00000487939 KRTAP10-6P60371 365 aaPredicted RBP4.33□□□□□ -1.72
PTEN-204ENST00000487939 DCAF7P61962 342 aa4.33□□□□□ -1.72
PTEN-204ENST00000487939 ACSM2AQ08AH3 577 aa4.33□□□□□ -1.72
PTEN-204ENST00000487939 ZNF234Q14588 700 aa4.33□□□□□ -1.72
PTEN-204ENST00000487939 FAM76BQ5HYJ3 339 aa4.33□□□□□ -1.72
PTEN-204ENST00000487939 C9orf50Q5SZB4 431 aa4.33□□□□□ -1.72
PTEN-204ENST00000487939 ACSM2BQ68CK6 577 aa4.33□□□□□ -1.72
PTEN-204ENST00000487939 C18orf63Q68DL7 685 aa4.33□□□□□ -1.72
PTEN-204ENST00000487939 KLHL35Q6PF15 583 aa4.33□□□□□ -1.72
PTEN-204ENST00000487939 PAPD4Q6PIY7 484 aaKnown RBP4.33□□□□□ -1.72
PTEN-204ENST00000487939 GDPD4Q6W3E5 623 aa4.33□□□□□ -1.72
PTEN-204ENST00000487939 ZNF704Q6ZNC4 412 aaPredicted RBP4.33□□□□□ -1.72
PTEN-204ENST00000487939 FOXL2NBQ6ZUU3 175 aa4.33□□□□□ -1.72
PTEN-204ENST00000487939 C9orf139Q6ZV77 190 aa4.33□□□□□ -1.72
PTEN-204ENST00000487939 IKBIPQ70UQ0 350 aa4.33□□□□□ -1.72
PTEN-204ENST00000487939 HIST3H2AQ7L7L0 130 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms