RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 FCHO2Q0JRZ9 810 aa4.93□□□□□ -1.62
BRCA1-217ENST00000487825 RAPGEF1Q13905 1077 aa4.93□□□□□ -1.62
BRCA1-217ENST00000487825 TAF1BQ53T94 588 aaPredicted RBP4.93□□□□□ -1.62
BRCA1-217ENST00000487825 PRSS55Q6UWB4 352 aaPredicted RBP4.93□□□□□ -1.62
BRCA1-217ENST00000487825 RBM44Q6ZP01 1051 aaKnown RBP4.93□□□□□ -1.62
BRCA1-217ENST00000487825 FAM57BQ71RH2 274 aa4.93□□□□□ -1.62
BRCA1-217ENST00000487825 ZDHHC17Q8IUH5 632 aa4.93□□□□□ -1.62
BRCA1-217ENST00000487825 CCDC60Q8IWA6 550 aaPredicted RBP4.93□□□□□ -1.62
BRCA1-217ENST00000487825 CCDC28AQ8IWP9 274 aa4.93□□□□□ -1.62
BRCA1-217ENST00000487825 AKAP1Q92667 903 aaKnown RBP eCLIP4.93□□□□□ -1.62
BRCA1-217ENST00000487825 SMARCD2Q92925 531 aa4.93□□□□□ -1.62
BRCA1-217ENST00000487825 CAMK1GQ96NX5 476 aa4.93□□□□□ -1.62
BRCA1-217ENST00000487825 WDR24Q96S15 920 aa4.93□□□□□ -1.62
BRCA1-217ENST00000487825 CLSTN3Q9BQT9 956 aa4.93□□□□□ -1.62
BRCA1-217ENST00000487825 PI4K2AQ9BTU6 479 aa4.93□□□□□ -1.62
BRCA1-217ENST00000487825 KAT14Q9H8E8 782 aa4.93□□□□□ -1.62
BRCA1-217ENST00000487825 FBN3Q75N90 2809 aa4.93□□□□□ -1.62
BRCA1-217ENST00000487825 MYO18AQ92614 2054 aaKnown RBP4.92□□□□□ -1.62
BRCA1-217ENST00000487825 FAM90A10PA6NDY2 464 aa4.92□□□□□ -1.62
BRCA1-217ENST00000487825 CLCA1A8K7I4 914 aa4.92□□□□□ -1.62
BRCA1-217ENST00000487825 HEPACAM2A8MVW5 462 aa4.92□□□□□ -1.62
BRCA1-217ENST00000487825 TTC34A8MYJ7 566 aa4.92□□□□□ -1.62
BRCA1-217ENST00000487825 PRYO14603 147 aa4.92□□□□□ -1.62
BRCA1-217ENST00000487825 MEIS2O14770 477 aa4.92□□□□□ -1.62
BRCA1-217ENST00000487825 MAGEB2O15479 319 aa4.92□□□□□ -1.62
BRCA1-217ENST00000487825 ADAM12O43184 909 aa4.92□□□□□ -1.62
BRCA1-217ENST00000487825 TLX3O43711 291 aaPredicted RBP4.92□□□□□ -1.62
BRCA1-217ENST00000487825 SH3BP5O60239 455 aa4.92□□□□□ -1.62
BRCA1-217ENST00000487825 TULP3O75386 442 aa4.92□□□□□ -1.62
BRCA1-217ENST00000487825 CSDE1O75534 798 aaKnown RBP4.92□□□□□ -1.62
BRCA1-217ENST00000487825 GJB3O75712 270 aa4.92□□□□□ -1.62
BRCA1-217ENST00000487825 TSHRP16473 764 aa4.92□□□□□ -1.62
BRCA1-217ENST00000487825 HOXB6P17509 224 aaKnown RBP4.92□□□□□ -1.62
BRCA1-217ENST00000487825 RPS6KB1P23443 525 aa4.92□□□□□ -1.62
BRCA1-217ENST00000487825 MST1P26927 711 aa4.92□□□□□ -1.62
BRCA1-217ENST00000487825 TMOD1P28289 359 aa4.92□□□□□ -1.62
BRCA1-217ENST00000487825 DUSP1P28562 367 aa4.92□□□□□ -1.62
BRCA1-217ENST00000487825 HOXD12P35452 270 aa4.92□□□□□ -1.62
BRCA1-217ENST00000487825 CCR2P41597 374 aa4.92□□□□□ -1.62
BRCA1-217ENST00000487825 DPP6P42658 865 aa4.92□□□□□ -1.62
BRCA1-217ENST00000487825 STT3AP46977 705 aa4.92□□□□□ -1.62
BRCA1-217ENST00000487825 PRIM2P49643 509 aa4.92□□□□□ -1.62
BRCA1-217ENST00000487825 ATXN3P54252 364 aaPredicted RBP4.92□□□□□ -1.62
BRCA1-217ENST00000487825 ALX1Q15699 326 aa4.92□□□□□ -1.62
BRCA1-217ENST00000487825 PSMD5Q16401 504 aa4.92□□□□□ -1.62
BRCA1-217ENST00000487825 SLC35G1Q2M3R5 365 aa4.92□□□□□ -1.62
BRCA1-217ENST00000487825 FAM90A2PQ658T7 463 aa4.92□□□□□ -1.62
BRCA1-217ENST00000487825 RUSC1-AS1Q66K80 236 aa4.92□□□□□ -1.62
BRCA1-217ENST00000487825 RAP1GAP2Q684P5 730 aa4.92□□□□□ -1.62
BRCA1-217ENST00000487825 MRNIPQ6NTE8 343 aa4.92□□□□□ -1.62
BRCA1-217ENST00000487825 USP17L6PQ6QN14 398 aa4.92□□□□□ -1.62
BRCA1-217ENST00000487825 SYT13Q7L8C5 426 aa4.92□□□□□ -1.62
BRCA1-217ENST00000487825 TMC8Q8IU68 726 aa4.92□□□□□ -1.62
BRCA1-217ENST00000487825 NAXDQ8IW45 347 aa4.92□□□□□ -1.62
BRCA1-217ENST00000487825 MMP21Q8N119 569 aa4.92□□□□□ -1.62
BRCA1-217ENST00000487825 GALNT15Q8N3T1 639 aa4.92□□□□□ -1.62
BRCA1-217ENST00000487825 MINDY1Q8N5J2 469 aa4.92□□□□□ -1.62
BRCA1-217ENST00000487825 LNX1Q8TBB1 728 aaPredicted RBP4.92□□□□□ -1.62
BRCA1-217ENST00000487825 FRAT1Q92837 279 aaPredicted RBP4.92□□□□□ -1.62
BRCA1-217ENST00000487825 TCEAL4Q96EI5 215 aa4.92□□□□□ -1.62
BRCA1-217ENST00000487825 SCLT1Q96NL6 688 aa4.92□□□□□ -1.62
BRCA1-217ENST00000487825 SDF4Q9BRK5 362 aa4.92□□□□□ -1.62
BRCA1-217ENST00000487825 GTPBP2Q9BX10 602 aaKnown RBP4.92□□□□□ -1.62
BRCA1-217ENST00000487825 PCDHAC1Q9H158 963 aa4.92□□□□□ -1.62
BRCA1-217ENST00000487825 FZD8Q9H461 694 aa4.92□□□□□ -1.62
BRCA1-217ENST00000487825 LY9Q9HBG7 655 aa4.92□□□□□ -1.62
BRCA1-217ENST00000487825 FSCN3Q9NQT6 498 aa4.92□□□□□ -1.62
BRCA1-217ENST00000487825 ECHDC1Q9NTX5 307 aa4.92□□□□□ -1.62
BRCA1-217ENST00000487825 GTSE1Q9NYZ3 720 aa4.92□□□□□ -1.62
BRCA1-217ENST00000487825 ADAM28Q9UKQ2 775 aa4.92□□□□□ -1.62
BRCA1-217ENST00000487825 PIN4Q9Y237 131 aaKnown RBP4.92□□□□□ -1.62
BRCA1-217ENST00000487825 SF3B1O75533 1304 aaKnown RBP eCLIP4.92□□□□□ -1.623e-17■■■■■ 109.4
BRCA1-217ENST00000487825 NEDD4P46934 1319 aa4.92□□□□□ -1.62
BRCA1-217ENST00000487825 CABIN1Q9Y6J0 2220 aa4.92□□□□□ -1.62
BRCA1-217ENST00000487825 CRYBG3Q68DQ2 2970 aa4.92□□□□□ -1.62
BRCA1-217ENST00000487825 SPENQ96T58 3664 aaKnown RBP4.91□□□□□ -1.62
BRCA1-217ENST00000487825 ARHGEF37A1IGU5 675 aa4.91□□□□□ -1.62
BRCA1-217ENST00000487825 B4DGG1 531 aa4.91□□□□□ -1.62
BRCA1-217ENST00000487825 KLRF2D3W0D1 207 aa4.91□□□□□ -1.62
BRCA1-217ENST00000487825 ZNF197O14709 1029 aa4.91□□□□□ -1.62
BRCA1-217ENST00000487825 RRP8O43159 456 aaKnown RBP4.91□□□□□ -1.62
BRCA1-217ENST00000487825 NDST3O95803 873 aa4.91□□□□□ -1.62
BRCA1-217ENST00000487825 CCNE2O96020 404 aa4.91□□□□□ -1.62
BRCA1-217ENST00000487825 ALPLP05186 524 aa4.91□□□□□ -1.62
BRCA1-217ENST00000487825 MYL4P12829 197 aa4.91□□□□□ -1.62
BRCA1-217ENST00000487825 PTPN2P17706 415 aa4.91□□□□□ -1.62
BRCA1-217ENST00000487825 NDUFS1P28331 727 aa4.91□□□□□ -1.62
BRCA1-217ENST00000487825 ADSSP30520 456 aa4.91□□□□□ -1.62
BRCA1-217ENST00000487825 NT5C2P49902 561 aa4.91□□□□□ -1.62
BRCA1-217ENST00000487825 CASP5P51878 434 aa4.91□□□□□ -1.62
BRCA1-217ENST00000487825 ITGB3BPQ13352 177 aaPredicted RBP4.91□□□□□ -1.62
BRCA1-217ENST00000487825 LY6DQ14210 128 aa4.91□□□□□ -1.62
BRCA1-217ENST00000487825 P3H1Q32P28 736 aa4.91□□□□□ -1.62
BRCA1-217ENST00000487825 KRTAP21-3Q3LHN1 58 aa4.91□□□□□ -1.62
BRCA1-217ENST00000487825 ARHGAP15Q53QZ3 475 aa4.91□□□□□ -1.62
BRCA1-217ENST00000487825 COBLL1Q53SF7 1204 aa4.91□□□□□ -1.62
BRCA1-217ENST00000487825 KYAT3Q6YP21 454 aaKnown RBP4.91□□□□□ -1.62
BRCA1-217ENST00000487825 KIAA0408Q6ZU52 694 aa4.91□□□□□ -1.62
BRCA1-217ENST00000487825 BEND5Q7L4P6 421 aa4.91□□□□□ -1.62
BRCA1-217ENST00000487825 IQCA1Q86XH1 822 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms