RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 RAD9BQ6WBX8 426 aa3.72□□□□□ -1.81
CCDC66-221ENST00000487739 PLEKHM3Q6ZWE6 761 aa3.72□□□□□ -1.81
CCDC66-221ENST00000487739 LRRTM4Q86VH4 590 aa3.72□□□□□ -1.81
CCDC66-221ENST00000487739 RHBDF1Q96CC6 855 aa3.72□□□□□ -1.81
CCDC66-221ENST00000487739 KIF1BPQ96EK5 621 aa3.72□□□□□ -1.81
CCDC66-221ENST00000487739 ZNF599Q96NL3 588 aa3.72□□□□□ -1.81
CCDC66-221ENST00000487739 TMEM47Q9BQJ4 181 aa3.72□□□□□ -1.81
CCDC66-221ENST00000487739 ACSS1Q9NUB1 689 aaPredicted RBP3.72□□□□□ -1.81
CCDC66-221ENST00000487739 MARCH4Q9P2E8 410 aaPredicted RBP3.72□□□□□ -1.81
CCDC66-221ENST00000487739 FBXL2Q9UKC9 423 aa3.72□□□□□ -1.81
CCDC66-221ENST00000487739 COMMD10Q9Y6G5 202 aa3.72□□□□□ -1.81
CCDC66-221ENST00000487739 HS3ST1O14792 307 aa3.71□□□□□ -1.82
CCDC66-221ENST00000487739 TSPAN4O14817 238 aa3.71□□□□□ -1.82
CCDC66-221ENST00000487739 NCAM2O15394 837 aa3.71□□□□□ -1.82
CCDC66-221ENST00000487739 CIDEAO60543 219 aa3.71□□□□□ -1.82
CCDC66-221ENST00000487739 CTSVO60911 334 aa3.71□□□□□ -1.82
CCDC66-221ENST00000487739 LDHAP00338 332 aaKnown RBP3.71□□□□□ -1.82
CCDC66-221ENST00000487739 IGLV1-44P01699 117 aa3.71□□□□□ -1.82
CCDC66-221ENST00000487739 PRSS56P0CW18 603 aa3.71□□□□□ -1.82
CCDC66-221ENST00000487739 GRIK2Q13002 908 aa3.71□□□□□ -1.82
CCDC66-221ENST00000487739 MYLK3Q32MK0 819 aa3.71□□□□□ -1.82
CCDC66-221ENST00000487739 GRAMD1BQ3KR37 738 aa3.71□□□□□ -1.82
CCDC66-221ENST00000487739 SLC9B1Q4ZJI4 515 aa3.71□□□□□ -1.82
CCDC66-221ENST00000487739 LDHAL6AQ6ZMR3 332 aa3.71□□□□□ -1.82
CCDC66-221ENST00000487739 NOTCH2NLQ7Z3S9 236 aa3.71□□□□□ -1.82
CCDC66-221ENST00000487739 TRPT1Q86TN4 253 aaKnown RBP3.71□□□□□ -1.82
CCDC66-221ENST00000487739 ANKRD18AQ8IVF6 992 aa3.71□□□□□ -1.82
CCDC66-221ENST00000487739 MAP7D3Q8IWC1 876 aa3.71□□□□□ -1.82
CCDC66-221ENST00000487739 DNAAF4Q8WXU2 420 aa3.71□□□□□ -1.82
CCDC66-221ENST00000487739 TMEM190Q8WZ59 177 aa3.71□□□□□ -1.82
CCDC66-221ENST00000487739 PCGF1Q9BSM1 259 aa3.71□□□□□ -1.82
CCDC66-221ENST00000487739 GPR52Q9Y2T5 361 aa3.71□□□□□ -1.82
CCDC66-221ENST00000487739 C2CD2Q9Y426 696 aa3.71□□□□□ -1.82
CCDC66-221ENST00000487739 LRRC53A6NM62 1247 aa3.7□□□□□ -1.82
CCDC66-221ENST00000487739 LDLRAD4O15165 306 aa3.7□□□□□ -1.82
CCDC66-221ENST00000487739 HMGB1P09429 215 aaKnown RBP3.7□□□□□ -1.82
CCDC66-221ENST00000487739 ERVK-10P10266 1014 aa3.7□□□□□ -1.82
CCDC66-221ENST00000487739 CSF2RAP15509 400 aa3.7□□□□□ -1.82
CCDC66-221ENST00000487739 HOXC8P31273 242 aa3.7□□□□□ -1.82
CCDC66-221ENST00000487739 GGT5P36269 586 aa3.7□□□□□ -1.82
CCDC66-221ENST00000487739 ARL1P40616 181 aaPredicted RBP3.7□□□□□ -1.82
CCDC66-221ENST00000487739 MLLT10P55197 1068 aa3.7□□□□□ -1.82
CCDC66-221ENST00000487739 CLDN20P56880 219 aa3.7□□□□□ -1.82
CCDC66-221ENST00000487739 RPP30P78346 268 aaKnown RBP3.7□□□□□ -1.82
CCDC66-221ENST00000487739 MAD2L1Q13257 205 aaPredicted RBP3.7□□□□□ -1.82
CCDC66-221ENST00000487739 DRAP1Q14919 205 aaPredicted RBP3.7□□□□□ -1.82
CCDC66-221ENST00000487739 GPR68Q15743 365 aa3.7□□□□□ -1.82
CCDC66-221ENST00000487739 TECRLQ5HYJ1 363 aa3.7□□□□□ -1.82
CCDC66-221ENST00000487739 C18orf63Q68DL7 685 aa3.7□□□□□ -1.82
CCDC66-221ENST00000487739 STXBP4Q6ZWJ1 553 aa3.7□□□□□ -1.82
CCDC66-221ENST00000487739 DPPA4Q7L190 304 aa3.7□□□□□ -1.82
CCDC66-221ENST00000487739 NRROSQ86YC3 692 aa3.7□□□□□ -1.82
CCDC66-221ENST00000487739 ADSSL1Q8N142 457 aa3.7□□□□□ -1.82
CCDC66-221ENST00000487739 TRIM58Q8NG06 486 aa3.7□□□□□ -1.82
CCDC66-221ENST00000487739 WDR20Q8TBZ3 569 aa3.7□□□□□ -1.82
CCDC66-221ENST00000487739 ARHGEF26Q96DR7 871 aa3.7□□□□□ -1.82
CCDC66-221ENST00000487739 ZBTB10Q96DT7 871 aa3.7□□□□□ -1.82
CCDC66-221ENST00000487739 TCP11L1Q9NUJ3 509 aa3.7□□□□□ -1.82
CCDC66-221ENST00000487739 KCND2Q9NZV8 630 aa3.7□□□□□ -1.82
CCDC66-221ENST00000487739 PRSS21Q9Y6M0 314 aa3.7□□□□□ -1.82
CCDC66-221ENST00000487739 EIF3FO00303 357 aaPredicted RBP3.69□□□□□ -1.82
CCDC66-221ENST00000487739 NR5A2O00482 541 aa3.69□□□□□ -1.82
CCDC66-221ENST00000487739 PSMD14O00487 310 aa3.69□□□□□ -1.82
CCDC66-221ENST00000487739 PDE9AO76083 593 aa3.69□□□□□ -1.82
CCDC66-221ENST00000487739 BAG4O95429 457 aaKnown RBP3.69□□□□□ -1.82
CCDC66-221ENST00000487739 GNB3P16520 340 aa3.69□□□□□ -1.82
CCDC66-221ENST00000487739 HOXC9P31274 260 aa3.69□□□□□ -1.82
CCDC66-221ENST00000487739 UBA7P41226 1012 aa3.69□□□□□ -1.82
CCDC66-221ENST00000487739 ARCN1P48444 511 aaKnown RBP3.69□□□□□ -1.82
CCDC66-221ENST00000487739 LUMP51884 338 aaPredicted RBP3.69□□□□□ -1.82
CCDC66-221ENST00000487739 IRX1P78414 480 aaPredicted RBP3.69□□□□□ -1.82
CCDC66-221ENST00000487739 COG7P83436 770 aa3.69□□□□□ -1.82
CCDC66-221ENST00000487739 RUNX1T1Q06455 604 aa3.69□□□□□ -1.82
CCDC66-221ENST00000487739 ACVR2BQ13705 512 aa3.69□□□□□ -1.82
CCDC66-221ENST00000487739 FGFBP1Q14512 234 aa3.69□□□□□ -1.82
CCDC66-221ENST00000487739 TAF12Q16514 161 aa3.69□□□□□ -1.82
CCDC66-221ENST00000487739 COL28A1Q2UY09 1125 aa3.69□□□□□ -1.82
CCDC66-221ENST00000487739 RBMS3Q6XE24 437 aaKnown RBP3.69□□□□□ -1.82
CCDC66-221ENST00000487739 KRTAP5-2Q701N4 177 aa3.69□□□□□ -1.82
CCDC66-221ENST00000487739 GTSCR1Q86UQ5 136 aa3.69□□□□□ -1.82
CCDC66-221ENST00000487739 LYG1Q8N1E2 194 aa3.69□□□□□ -1.82
CCDC66-221ENST00000487739 APBB2Q92870 758 aa3.69□□□□□ -1.82
CCDC66-221ENST00000487739 HARBI1Q96MB7 349 aa3.69□□□□□ -1.82
CCDC66-221ENST00000487739 RPS6KC1Q96S38 1066 aa3.69□□□□□ -1.82
CCDC66-221ENST00000487739 ACOX2Q99424 681 aa3.69□□□□□ -1.82
CCDC66-221ENST00000487739 ARPC5LQ9BPX5 153 aa3.69□□□□□ -1.82
CCDC66-221ENST00000487739 LRMDAQ9H2I8 198 aa3.69□□□□□ -1.82
CCDC66-221ENST00000487739 BICC1Q9H694 974 aaKnown RBP3.69□□□□□ -1.82
CCDC66-221ENST00000487739 VEZTQ9HBM0 779 aa3.69□□□□□ -1.82
CCDC66-221ENST00000487739 LTB4R2Q9NPC1 389 aa3.69□□□□□ -1.82
CCDC66-221ENST00000487739 SLC6A13Q9NSD5 602 aa3.69□□□□□ -1.82
CCDC66-221ENST00000487739 TBX20Q9UMR3 447 aa3.69□□□□□ -1.82
CCDC66-221ENST00000487739 RNF215Q9Y6U7 377 aa3.69□□□□□ -1.82
CCDC66-221ENST00000487739 OR5K3A6NET4 321 aa3.68□□□□□ -1.82
CCDC66-221ENST00000487739 HOXA13P31271 388 aaPredicted RBP3.68□□□□□ -1.82
CCDC66-221ENST00000487739 NR2C2P49116 596 aa3.68□□□□□ -1.82
CCDC66-221ENST00000487739 TLE2Q04725 743 aa3.68□□□□□ -1.82
CCDC66-221ENST00000487739 LPAL2Q16609 132 aa3.68□□□□□ -1.82
CCDC66-221ENST00000487739 GSTA3Q16772 222 aa3.68□□□□□ -1.82
CCDC66-221ENST00000487739 ZC2HC1CQ53FD0 456 aaPredicted RBP3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms