RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 ABCA12Q86UK0 2595 aa15.2■□□□□ 0.02
MCF2L-228ENST00000487354 ANKRD62A6NC57 917 aa15.2■□□□□ 0.02
MCF2L-228ENST00000487354 GOLGA6L3A6NEY3 463 aa15.2■□□□□ 0.02
MCF2L-228ENST00000487354 MKRN2OSH3BPM6 223 aa15.2■□□□□ 0.02
MCF2L-228ENST00000487354 INPP4BO15327 924 aa15.2■□□□□ 0.02
MCF2L-228ENST00000487354 DNAJB5O75953 348 aa15.2■□□□□ 0.02
MCF2L-228ENST00000487354 ATP1A1P05023 1023 aaKnown RBP15.2■□□□□ 0.02
MCF2L-228ENST00000487354 PSMA2P25787 234 aa15.2■□□□□ 0.02
MCF2L-228ENST00000487354 MIPP30301 263 aa15.2■□□□□ 0.02
MCF2L-228ENST00000487354 HSPA9P38646 679 aaKnown RBP15.2■□□□□ 0.02
MCF2L-228ENST00000487354 HCAR3P49019 387 aa15.2■□□□□ 0.02
MCF2L-228ENST00000487354 STC1P52823 247 aa15.2■□□□□ 0.02
MCF2L-228ENST00000487354 UBE2HP62256 183 aa15.2■□□□□ 0.02
MCF2L-228ENST00000487354 UBE2IP63279 158 aaKnown RBP15.2■□□□□ 0.02
MCF2L-228ENST00000487354 SH3BP2P78314 561 aa15.2■□□□□ 0.02
MCF2L-228ENST00000487354 ERV3-1Q14264 604 aa15.2■□□□□ 0.02
MCF2L-228ENST00000487354 PLEKHA7Q6IQ23 1121 aa15.2■□□□□ 0.02
MCF2L-228ENST00000487354 DCUN1D2Q6PH85 259 aa15.2■□□□□ 0.02
MCF2L-228ENST00000487354 USP45Q70EL2 814 aa15.2■□□□□ 0.02
MCF2L-228ENST00000487354 TEX19Q8NA77 164 aa15.2■□□□□ 0.02
MCF2L-228ENST00000487354 GALNT6Q8NCL4 622 aa15.2■□□□□ 0.02
MCF2L-228ENST00000487354 GALNT11Q8NCW6 608 aa15.2■□□□□ 0.02
MCF2L-228ENST00000487354 ULBP3Q9BZM4 244 aa15.2■□□□□ 0.02
MCF2L-228ENST00000487354 SEPT11Q9NVA2 429 aaKnown RBP15.2■□□□□ 0.02
MCF2L-228ENST00000487354 VPS18Q9P253 973 aa15.2■□□□□ 0.02
MCF2L-228ENST00000487354 KCNK6Q9Y257 313 aa15.2■□□□□ 0.02
MCF2L-228ENST00000487354 LILRA5A6NI73 299 aa15.19■□□□□ 0.02
MCF2L-228ENST00000487354 FADS2P1A8MWK0 482 aa15.19■□□□□ 0.02
MCF2L-228ENST00000487354 RFPL1O75677 317 aa15.19■□□□□ 0.02
MCF2L-228ENST00000487354 AGFG2O95081 481 aa15.19■□□□□ 0.02
MCF2L-228ENST00000487354 F3P13726 295 aa15.19■□□□□ 0.02
MCF2L-228ENST00000487354 TCF4P15884 667 aa15.19■□□□□ 0.02
MCF2L-228ENST00000487354 MAPK9P45984 424 aa15.19■□□□□ 0.02
MCF2L-228ENST00000487354 ARMC12Q5T9G4 340 aa15.19■□□□□ 0.02
MCF2L-228ENST00000487354 ACAD10Q6JQN1 1059 aa15.19■□□□□ 0.02
MCF2L-228ENST00000487354 C6orf15Q6UXA7 325 aaPredicted RBP15.19■□□□□ 0.02
MCF2L-228ENST00000487354 C9orf72Q96LT7 481 aa15.19■□□□□ 0.02
MCF2L-228ENST00000487354 RIOK2Q9BVS4 552 aaKnown RBP15.19■□□□□ 0.02
MCF2L-228ENST00000487354 POLHQ9Y253 713 aa15.19■□□□□ 0.02
MCF2L-228ENST00000487354 PCDHGA6Q9Y5G7 932 aa15.19■□□□□ 0.02
MCF2L-228ENST00000487354 ADGRG1Q9Y653 693 aa15.19■□□□□ 0.02
MCF2L-228ENST00000487354 PCSK5Q92824 1860 aa15.18■□□□□ 0.02
MCF2L-228ENST00000487354 A0A0J9YYE9 177 aa15.18■□□□□ 0.02
MCF2L-228ENST00000487354 TMEM191CA6NGB0 347 aa15.18■□□□□ 0.02
MCF2L-228ENST00000487354 DAPK3O43293 454 aa15.18■□□□□ 0.02
MCF2L-228ENST00000487354 LRCH4O75427 683 aa15.18■□□□□ 0.02
MCF2L-228ENST00000487354 SORBS2O94875 1100 aaKnown RBP15.18■□□□□ 0.02
MCF2L-228ENST00000487354 TRBC1P01850 177 aa15.18■□□□□ 0.02
MCF2L-228ENST00000487354 ACP5P13686 325 aa15.18■□□□□ 0.02
MCF2L-228ENST00000487354 IL1R2P27930 398 aa15.18■□□□□ 0.02
MCF2L-228ENST00000487354 LAMB3Q13751 1172 aa15.18■□□□□ 0.02
MCF2L-228ENST00000487354 SYCP1Q15431 976 aa15.18■□□□□ 0.02
MCF2L-228ENST00000487354 RALGPS1Q5JS13 557 aa15.18■□□□□ 0.02
MCF2L-228ENST00000487354 FHL5Q5TD97 284 aa15.18■□□□□ 0.02
MCF2L-228ENST00000487354 CHST15Q7LFX5 561 aaPredicted RBP15.18■□□□□ 0.02
MCF2L-228ENST00000487354 PSTKQ8IV42 348 aaKnown RBP15.18■□□□□ 0.02
MCF2L-228ENST00000487354 APLFQ8IW19 511 aaPredicted RBP15.18■□□□□ 0.02
MCF2L-228ENST00000487354 LZTR1Q8N653 840 aa15.18■□□□□ 0.02
MCF2L-228ENST00000487354 SSC4DQ8WTU2 575 aa15.18■□□□□ 0.02
MCF2L-228ENST00000487354 RUFY1Q96T51 708 aa15.18■□□□□ 0.02
MCF2L-228ENST00000487354 HERPUD2Q9BSE4 406 aa15.18■□□□□ 0.02
MCF2L-228ENST00000487354 SCHIP1Q9P0W5 487 aaPredicted RBP15.18■□□□□ 0.02
MCF2L-228ENST00000487354 CPNE7Q9UBL6 633 aa15.18■□□□□ 0.02
MCF2L-228ENST00000487354 ZNHIT2Q9UHR6 403 aa15.18■□□□□ 0.02
MCF2L-228ENST00000487354 SLC30A1Q9Y6M5 507 aa15.18■□□□□ 0.02
MCF2L-228ENST00000487354 CDC14CA4D256 554 aa15.17■□□□□ 0.02
MCF2L-228ENST00000487354 KIAA0754O94854 1291 aa15.17■□□□□ 0.02
MCF2L-228ENST00000487354 TIAF1O95411 115 aa15.17■□□□□ 0.02
MCF2L-228ENST00000487354 PRLP01236 227 aa15.17■□□□□ 0.02
MCF2L-228ENST00000487354 ZNF30P17039 623 aa15.17■□□□□ 0.02
MCF2L-228ENST00000487354 AMPD1P23109 780 aa15.17■□□□□ 0.02
MCF2L-228ENST00000487354 MMP13P45452 471 aa15.17■□□□□ 0.02
MCF2L-228ENST00000487354 LEPRP48357 1165 aaKnown RBP15.17■□□□□ 0.02
MCF2L-228ENST00000487354 PPM1FP49593 454 aaPredicted RBP15.17■□□□□ 0.02
MCF2L-228ENST00000487354 COPB1P53618 953 aaKnown RBP15.17■□□□□ 0.02
MCF2L-228ENST00000487354 FOXM1Q08050 763 aa15.17■□□□□ 0.02
MCF2L-228ENST00000487354 DPYSL2Q16555 572 aa15.17■□□□□ 0.02
MCF2L-228ENST00000487354 HENMT1Q5T8I9 393 aaKnown RBP15.17■□□□□ 0.02
MCF2L-228ENST00000487354 LYSMD3Q7Z3D4 306 aa15.17■□□□□ 0.02
MCF2L-228ENST00000487354 SLC9B2Q86UD5 537 aa15.17■□□□□ 0.02
MCF2L-228ENST00000487354 TEX26Q8N6G2 289 aa15.17■□□□□ 0.02
MCF2L-228ENST00000487354 EXD1Q8NHP7 514 aa15.17■□□□□ 0.02
MCF2L-228ENST00000487354 CPT1CQ8TCG5 803 aa15.17■□□□□ 0.02
MCF2L-228ENST00000487354 SH3KBP1Q96B97 665 aa15.17■□□□□ 0.02
MCF2L-228ENST00000487354 PLEKHG4BQ96PX9 1271 aa15.17■□□□□ 0.02
MCF2L-228ENST00000487354 EPB41L1Q9H4G0 881 aa15.17■□□□□ 0.02
MCF2L-228ENST00000487354 ZNF768Q9H5H4 540 aaKnown RBP15.17■□□□□ 0.02
MCF2L-228ENST00000487354 RCOR3Q9P2K3 495 aaPredicted RBP15.17■□□□□ 0.02
MCF2L-228ENST00000487354 KIR2DS5A0A0G2JLQ3 304 aa15.16■□□□□ 0.02
MCF2L-228ENST00000487354 A0A0G2JNG1 304 aa15.16■□□□□ 0.02
MCF2L-228ENST00000487354 KIR2DS3K7RE56 304 aa15.16■□□□□ 0.02
MCF2L-228ENST00000487354 CREG1O75629 220 aa15.16■□□□□ 0.02
MCF2L-228ENST00000487354 NDUFA10O95299 355 aa15.16■□□□□ 0.02
MCF2L-228ENST00000487354 PYGLP06737 847 aa15.16■□□□□ 0.02
MCF2L-228ENST00000487354 NFKBIAP25963 317 aa15.16■□□□□ 0.02
MCF2L-228ENST00000487354 SEMA5AQ13591 1074 aa15.16■□□□□ 0.02
MCF2L-228ENST00000487354 KIR2DS5Q14953 304 aa15.16■□□□□ 0.02
MCF2L-228ENST00000487354 NADK2Q4G0N4 442 aa15.16■□□□□ 0.02
MCF2L-228ENST00000487354 PRR30Q53SZ7 412 aaPredicted RBP15.16■□□□□ 0.02
MCF2L-228ENST00000487354 CPZQ66K79 652 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms