RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 ETFBP38117 255 aa11.56□□□□□ -0.56
TRIM56-204ENST00000487252 PTK2Q05397 1052 aa11.56□□□□□ -0.56
TRIM56-204ENST00000487252 AFMIDQ63HM1 303 aa11.56□□□□□ -0.56
TRIM56-204ENST00000487252 ISM2Q6H9L7 571 aa11.56□□□□□ -0.56
TRIM56-204ENST00000487252 PWWP2BQ6NUJ5 590 aa11.56□□□□□ -0.56
TRIM56-204ENST00000487252 XKRXQ6PP77 449 aa11.56□□□□□ -0.56
TRIM56-204ENST00000487252 ZSWIM9Q86XI8 627 aa11.56□□□□□ -0.56
TRIM56-204ENST00000487252 ZBTB2Q8N680 514 aa11.56□□□□□ -0.56
TRIM56-204ENST00000487252 KLHL6Q8WZ60 621 aa11.56□□□□□ -0.56
TRIM56-204ENST00000487252 SH3KBP1Q96B97 665 aa11.56□□□□□ -0.56
TRIM56-204ENST00000487252 GSDMAQ96QA5 445 aa11.56□□□□□ -0.56
TRIM56-204ENST00000487252 FOXC2Q99958 501 aa11.56□□□□□ -0.56
TRIM56-204ENST00000487252 TREX2Q9BQ50 279 aaPredicted RBP11.56□□□□□ -0.56
TRIM56-204ENST00000487252 SUV39H2Q9H5I1 410 aa11.56□□□□□ -0.56
TRIM56-204ENST00000487252 WDCPQ9H6R7 721 aa11.56□□□□□ -0.56
TRIM56-204ENST00000487252 ZNF552Q9H707 407 aaPredicted RBP11.56□□□□□ -0.56
TRIM56-204ENST00000487252 SUDS3Q9H7L9 328 aaPredicted RBP11.56□□□□□ -0.56
TRIM56-204ENST00000487252 PHPT1Q9NRX4 125 aaPredicted RBP11.56□□□□□ -0.56
TRIM56-204ENST00000487252 FGF21Q9NSA1 209 aa11.56□□□□□ -0.56
TRIM56-204ENST00000487252 NDFIP2Q9NV92 336 aa11.56□□□□□ -0.56
TRIM56-204ENST00000487252 ZNHIT2Q9UHR6 403 aa11.56□□□□□ -0.56
TRIM56-204ENST00000487252 TRBV23OR9-2A0A075B6M9 112 aa11.55□□□□□ -0.56
TRIM56-204ENST00000487252 THAP12O43422 761 aa11.55□□□□□ -0.56
TRIM56-204ENST00000487252 TMCC1O94876 653 aa11.55□□□□□ -0.56
TRIM56-204ENST00000487252 PIGNO95427 931 aa11.55□□□□□ -0.56
TRIM56-204ENST00000487252 IGSF6O95976 241 aa11.55□□□□□ -0.56
TRIM56-204ENST00000487252 ALPPP05187 535 aa11.55□□□□□ -0.56
TRIM56-204ENST00000487252 ATP1A3P13637 1013 aa11.55□□□□□ -0.56
TRIM56-204ENST00000487252 AGAP20933 346 aa11.55□□□□□ -0.56
TRIM56-204ENST00000487252 TSFMP43897 325 aaKnown RBP11.55□□□□□ -0.56
TRIM56-204ENST00000487252 PPM1FP49593 454 aaPredicted RBP11.55□□□□□ -0.56
TRIM56-204ENST00000487252 NFATC2Q13469 925 aa11.55□□□□□ -0.56
TRIM56-204ENST00000487252 MYBPC3Q14896 1274 aa11.55□□□□□ -0.56
TRIM56-204ENST00000487252 DENND1BQ6P3S1 775 aa11.55□□□□□ -0.56
TRIM56-204ENST00000487252 BRAT1Q6PJG6 821 aa11.55□□□□□ -0.56
TRIM56-204ENST00000487252 ZNF765Q7L2R6 523 aa11.55□□□□□ -0.56
TRIM56-204ENST00000487252 PRSS42Q7Z5A4 293 aa11.55□□□□□ -0.56
TRIM56-204ENST00000487252 GRAMD1CQ8IYS0 662 aa11.55□□□□□ -0.56
TRIM56-204ENST00000487252 ZADH2Q8N4Q0 377 aa11.55□□□□□ -0.56
TRIM56-204ENST00000487252 CHDHQ8NE62 594 aaPredicted RBP11.55□□□□□ -0.56
TRIM56-204ENST00000487252 NT5C3BQ969T7 300 aa11.55□□□□□ -0.56
TRIM56-204ENST00000487252 PGAP3Q96FM1 320 aaPredicted RBP11.55□□□□□ -0.56
TRIM56-204ENST00000487252 ZYG11BQ9C0D3 744 aa11.55□□□□□ -0.56
TRIM56-204ENST00000487252 ZBTB20Q9HC78 741 aaPredicted RBP11.55□□□□□ -0.56
TRIM56-204ENST00000487252 FANCLQ9NW38 375 aa11.55□□□□□ -0.56
TRIM56-204ENST00000487252 PPARGC1AQ9UBK2 798 aaKnown RBP11.55□□□□□ -0.56
TRIM56-204ENST00000487252 VPS13CQ709C8 3753 aa11.55□□□□□ -0.56
TRIM56-204ENST00000487252 LILRA5A6NI73 299 aa11.54□□□□□ -0.56
TRIM56-204ENST00000487252 PPP1R3GB7ZBB8 358 aa11.54□□□□□ -0.56
TRIM56-204ENST00000487252 STX10O60499 249 aa11.54□□□□□ -0.56
TRIM56-204ENST00000487252 RAB40ALP0C0E4 278 aa11.54□□□□□ -0.56
TRIM56-204ENST00000487252 POLD2P49005 469 aa11.54□□□□□ -0.56
TRIM56-204ENST00000487252 SEPHS1P49903 392 aa11.54□□□□□ -0.56
TRIM56-204ENST00000487252 CDK3Q00526 305 aa11.54□□□□□ -0.56
TRIM56-204ENST00000487252 OTUD4Q01804 1114 aaKnown RBP11.54□□□□□ -0.56
TRIM56-204ENST00000487252 PYCR3Q53H96 274 aa11.54□□□□□ -0.56
TRIM56-204ENST00000487252 ZNF324BQ6AW86 544 aaPredicted RBP11.54□□□□□ -0.56
TRIM56-204ENST00000487252 MTFR2Q6P444 385 aa11.54□□□□□ -0.56
TRIM56-204ENST00000487252 CYB5D1Q6P9G0 228 aa11.54□□□□□ -0.56
TRIM56-204ENST00000487252 IYDQ6PHW0 289 aa11.54□□□□□ -0.56
TRIM56-204ENST00000487252 VSTM4Q8IW00 320 aa11.54□□□□□ -0.56
TRIM56-204ENST00000487252 MYRIPQ8NFW9 859 aa11.54□□□□□ -0.56
TRIM56-204ENST00000487252 CHTF18Q8WVB6 975 aa11.54□□□□□ -0.56
TRIM56-204ENST00000487252 TM9SF4Q92544 642 aa11.54□□□□□ -0.56
TRIM56-204ENST00000487252 COQ10AQ96MF6 247 aa11.54□□□□□ -0.56
TRIM56-204ENST00000487252 ZNF641Q96N77 438 aaPredicted RBP11.54□□□□□ -0.56
TRIM56-204ENST00000487252 TRAPPC9Q96Q05 1148 aa11.54□□□□□ -0.56
TRIM56-204ENST00000487252 NPY6RQ99463 290 aa11.54□□□□□ -0.56
TRIM56-204ENST00000487252 TBC1D10AQ9BXI6 508 aa11.54□□□□□ -0.56
TRIM56-204ENST00000487252 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.54□□□□□ -0.56
TRIM56-204ENST00000487252 ENKD1Q9H0I2 346 aa11.54□□□□□ -0.56
TRIM56-204ENST00000487252 SUCOQ9UBS9 1254 aaKnown RBP11.54□□□□□ -0.56
TRIM56-204ENST00000487252 TCFL5Q9UL49 500 aa11.54□□□□□ -0.56
TRIM56-204ENST00000487252 NOVA2Q9UNW9 492 aaKnown RBP11.54□□□□□ -0.56
TRIM56-204ENST00000487252 PCDHB4Q9Y5E5 795 aa11.54□□□□□ -0.56
TRIM56-204ENST00000487252 CSAG2Q9Y5P2 127 aa11.54□□□□□ -0.56
TRIM56-204ENST00000487252 CNTRLQ7Z7A1 2325 aa11.53□□□□□ -0.56
TRIM56-204ENST00000487252 KDELR3O43731 214 aa11.53□□□□□ -0.56
TRIM56-204ENST00000487252 KLHL41O60662 606 aa11.53□□□□□ -0.56
TRIM56-204ENST00000487252 SRGAP2O75044 1071 aa11.53□□□□□ -0.56
TRIM56-204ENST00000487252 IPO13O94829 963 aaKnown RBP11.53□□□□□ -0.56
TRIM56-204ENST00000487252 ELFN1P0C7U0 828 aa11.53□□□□□ -0.56
TRIM56-204ENST00000487252 ATXN8OSP0DMR3 200 aa11.53□□□□□ -0.56
TRIM56-204ENST00000487252 SKILP12757 684 aa11.53□□□□□ -0.56
TRIM56-204ENST00000487252 NELFEP18615 380 aaKnown RBP11.53□□□□□ -0.56
TRIM56-204ENST00000487252 TFE3P19532 575 aaPredicted RBP11.53□□□□□ -0.56
TRIM56-204ENST00000487252 TEAD1P28347 426 aa11.53□□□□□ -0.56
TRIM56-204ENST00000487252 MAPK9P45984 424 aa11.53□□□□□ -0.56
TRIM56-204ENST00000487252 TDGF1P3P51864 188 aa11.53□□□□□ -0.56
TRIM56-204ENST00000487252 SOX8P57073 446 aa11.53□□□□□ -0.56
TRIM56-204ENST00000487252 UBASH3AP57075 661 aa11.53□□□□□ -0.56
TRIM56-204ENST00000487252 FOXD4Q12950 439 aaPredicted RBP11.53□□□□□ -0.56
TRIM56-204ENST00000487252 TBX2Q13207 712 aaPredicted RBP11.53□□□□□ -0.56
TRIM56-204ENST00000487252 ATP1A4Q13733 1029 aa11.53□□□□□ -0.56
TRIM56-204ENST00000487252 LRP8Q14114 963 aa11.53□□□□□ -0.56
TRIM56-204ENST00000487252 GRM3Q14832 879 aa11.53□□□□□ -0.56
TRIM56-204ENST00000487252 ASIC2Q16515 512 aa11.53□□□□□ -0.56
TRIM56-204ENST00000487252 INO80DQ53TQ3 878 aaPredicted RBP11.53□□□□□ -0.56
TRIM56-204ENST00000487252 HGSNATQ68CP4 663 aa11.53□□□□□ -0.56
TRIM56-204ENST00000487252 FCRL6Q6DN72 434 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms