RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 C9orf172C9J069 976 aa24.36■■□□□ 1.49
LIME1-206ENST00000487026 PTMSP20962 102 aa24.36■■□□□ 1.49
LIME1-206ENST00000487026 GPR3P46089 330 aa24.36■■□□□ 1.49
LIME1-206ENST00000487026 IFI35P80217 286 aaPredicted RBP24.36■■□□□ 1.49
LIME1-206ENST00000487026 SLC9A4Q6AI14 798 aa24.36■■□□□ 1.49
LIME1-206ENST00000487026 CHST15Q7LFX5 561 aaPredicted RBP24.36■■□□□ 1.49
LIME1-206ENST00000487026 RNF25Q96BH1 459 aaPredicted RBP24.36■■□□□ 1.49
LIME1-206ENST00000487026 WBP1Q96G27 269 aa24.36■■□□□ 1.49
LIME1-206ENST00000487026 CCDC74BQ96LY2 380 aa24.36■■□□□ 1.49
LIME1-206ENST00000487026 KCNK4Q9NYG8 393 aa24.36■■□□□ 1.49
LIME1-206ENST00000487026 HYOU1Q9Y4L1 999 aa24.36■■□□□ 1.49
LIME1-206ENST00000487026 IGHV1OR21-1A0A087WYE8 117 aa24.35■■□□□ 1.49
LIME1-206ENST00000487026 APOL1O14791 398 aa24.35■■□□□ 1.49
LIME1-206ENST00000487026 ZW10O43264 779 aa24.35■■□□□ 1.49
LIME1-206ENST00000487026 DNAJC6O75061 913 aa24.35■■□□□ 1.49
LIME1-206ENST00000487026 LIPCP11150 499 aa24.35■■□□□ 1.49
LIME1-206ENST00000487026 ARHGAP25P42331 645 aa24.35■■□□□ 1.49
LIME1-206ENST00000487026 LYSMD3Q7Z3D4 306 aa24.35■■□□□ 1.49
LIME1-206ENST00000487026 RFX6Q8HWS3 928 aa24.35■■□□□ 1.49
LIME1-206ENST00000487026 CCHCR1Q8TD31 782 aa24.35■■□□□ 1.49
LIME1-206ENST00000487026 SLC37A2Q8TED4 501 aa24.35■■□□□ 1.49
LIME1-206ENST00000487026 EID2BQ96D98 161 aa24.35■■□□□ 1.49
LIME1-206ENST00000487026 AGAP3Q96P47 875 aa24.35■■□□□ 1.49
LIME1-206ENST00000487026 BRD8Q9H0E9 1235 aa24.35■■□□□ 1.49
LIME1-206ENST00000487026 ARFGAP3Q9NP61 516 aa24.35■■□□□ 1.49
LIME1-206ENST00000487026 PKD2L2Q9NZM6 624 aa24.35■■□□□ 1.49
LIME1-206ENST00000487026 TMEM9Q9P0T7 183 aa24.35■■□□□ 1.49
LIME1-206ENST00000487026 ZNF462Q96JM2 2506 aa24.34■■□□□ 1.49
LIME1-206ENST00000487026 MFAP3LO75121 409 aa24.34■■□□□ 1.49
LIME1-206ENST00000487026 KRT1P04264 644 aa24.34■■□□□ 1.49
LIME1-206ENST00000487026 TPM1P09493 284 aa24.34■■□□□ 1.49
LIME1-206ENST00000487026 PIRTP0C851 137 aa24.34■■□□□ 1.49
LIME1-206ENST00000487026 LIMK2P53671 638 aa24.34■■□□□ 1.49
LIME1-206ENST00000487026 DYNLT1P63172 113 aa24.34■■□□□ 1.49
LIME1-206ENST00000487026 HENMT1Q5T8I9 393 aaKnown RBP24.34■■□□□ 1.49
LIME1-206ENST00000487026 ZNF605Q86T29 641 aa24.34■■□□□ 1.49
LIME1-206ENST00000487026 VASH2Q86V25 355 aa24.34■■□□□ 1.49
LIME1-206ENST00000487026 RAVER1Q8IY67 606 aaKnown RBP24.34■■□□□ 1.49
LIME1-206ENST00000487026 RNF214Q8ND24 703 aa24.34■■□□□ 1.49
LIME1-206ENST00000487026 ADGRE3Q9BY15 652 aa24.34■■□□□ 1.49
LIME1-206ENST00000487026 AKAP7Q9P0M2 348 aaPredicted RBP24.34■■□□□ 1.49
LIME1-206ENST00000487026 KCNK6Q9Y257 313 aa24.34■■□□□ 1.49
LIME1-206ENST00000487026 PIEZO2Q9H5I5 2752 aa24.34■■□□□ 1.49
LIME1-206ENST00000487026 CSF2RBP32927 897 aa24.33■■□□□ 1.49
LIME1-206ENST00000487026 PPM1FP49593 454 aaPredicted RBP24.33■■□□□ 1.49
LIME1-206ENST00000487026 LRP8Q14114 963 aa24.33■■□□□ 1.49
LIME1-206ENST00000487026 PDK1Q15118 436 aa24.33■■□□□ 1.49
LIME1-206ENST00000487026 PCSK7Q16549 785 aa24.33■■□□□ 1.49
LIME1-206ENST00000487026 CLPPQ16740 277 aaPredicted RBP24.33■■□□□ 1.49
LIME1-206ENST00000487026 ZNF648Q5T619 568 aaPredicted RBP24.33■■□□□ 1.49
LIME1-206ENST00000487026 RHOT2Q8IXI1 618 aa24.33■■□□□ 1.49
LIME1-206ENST00000487026 PMEPA1Q969W9 287 aa24.33■■□□□ 1.49
LIME1-206ENST00000487026 TRIB3Q96RU7 358 aa24.33■■□□□ 1.49
LIME1-206ENST00000487026 VPS18Q9P253 973 aa24.33■■□□□ 1.49
LIME1-206ENST00000487026 TBC1D29Q9UFV1 150 aa24.33■■□□□ 1.49
LIME1-206ENST00000487026 SHOC2Q9UQ13 582 aa24.33■■□□□ 1.49
LIME1-206ENST00000487026 ZNF487B1APH4 448 aa24.32■■□□□ 1.48
LIME1-206ENST00000487026 MTA2O94776 668 aa24.32■■□□□ 1.48
LIME1-206ENST00000487026 ZIC2O95409 532 aaPredicted RBP24.32■■□□□ 1.48
LIME1-206ENST00000487026 FGF3P11487 239 aaPredicted RBP24.32■■□□□ 1.48
LIME1-206ENST00000487026 LLGL1Q15334 1064 aa24.32■■□□□ 1.48
LIME1-206ENST00000487026 SKOR2Q2VWA4 1001 aaPredicted RBP24.32■■□□□ 1.48
LIME1-206ENST00000487026 NT5DC3Q86UY8 548 aa24.32■■□□□ 1.48
LIME1-206ENST00000487026 SFRP1Q8N474 314 aa24.32■■□□□ 1.48
LIME1-206ENST00000487026 OR4D9Q8NGE8 314 aa24.32■■□□□ 1.48
LIME1-206ENST00000487026 JPH3Q8WXH2 748 aaPredicted RBP24.32■■□□□ 1.48
LIME1-206ENST00000487026 IMP4Q96G21 291 aaKnown RBP24.32■■□□□ 1.48
LIME1-206ENST00000487026 OLFM3Q96PB7 478 aa24.32■■□□□ 1.48
LIME1-206ENST00000487026 SLC38A3Q99624 504 aa24.32■■□□□ 1.48
LIME1-206ENST00000487026 TSPY26PQ9H489 355 aa24.32■■□□□ 1.48
LIME1-206ENST00000487026 ZFYVE1Q9HBF4 777 aa24.32■■□□□ 1.48
LIME1-206ENST00000487026 RGSL1A5PLK6 1076 aa24.31■■□□□ 1.48
LIME1-206ENST00000487026 HGSO14964 777 aaPredicted RBP24.31■■□□□ 1.48
LIME1-206ENST00000487026 SNX2O60749 519 aa24.31■■□□□ 1.48
LIME1-206ENST00000487026 SLC4A1P02730 911 aa24.31■■□□□ 1.48
LIME1-206ENST00000487026 ACP5P13686 325 aa24.31■■□□□ 1.48
LIME1-206ENST00000487026 PLA2G2AP14555 144 aa24.31■■□□□ 1.48
LIME1-206ENST00000487026 NOP2P46087 812 aaKnown RBP24.31■■□□□ 1.48
LIME1-206ENST00000487026 SQSTM1Q13501 440 aa24.31■■□□□ 1.48
LIME1-206ENST00000487026 ODF2Q5BJF6 829 aa24.31■■□□□ 1.48
LIME1-206ENST00000487026 MANEAQ5SRI9 462 aa24.31■■□□□ 1.48
LIME1-206ENST00000487026 TMEM164Q5U3C3 297 aa24.31■■□□□ 1.48
LIME1-206ENST00000487026 ALS2CLQ60I27 953 aa24.31■■□□□ 1.48
LIME1-206ENST00000487026 MFSD7Q6UXD7 560 aa24.31■■□□□ 1.48
LIME1-206ENST00000487026 GPR26Q8NDV2 337 aa24.31■■□□□ 1.48
LIME1-206ENST00000487026 SPATA22Q8NHS9 363 aa24.31■■□□□ 1.48
LIME1-206ENST00000487026 SPATA16Q9BXB7 569 aa24.31■■□□□ 1.48
LIME1-206ENST00000487026 ZMYND15Q9H091 742 aa24.31■■□□□ 1.48
LIME1-206ENST00000487026 SLC25A51Q9H1U9 297 aa24.31■■□□□ 1.48
LIME1-206ENST00000487026 SAE1Q9UBE0 346 aaPredicted RBP24.31■■□□□ 1.48
LIME1-206ENST00000487026 PCDHB11Q9Y5F2 797 aa24.31■■□□□ 1.48
LIME1-206ENST00000487026 ZFC3H1O60293 1989 aaKnown RBP24.31■■□□□ 1.48
LIME1-206ENST00000487026 ZFXP17010 805 aaPredicted RBP24.3■■□□□ 1.48
LIME1-206ENST00000487026 FASLGP48023 281 aa24.3■■□□□ 1.48
LIME1-206ENST00000487026 NFATC2Q13469 925 aa24.3■■□□□ 1.48
LIME1-206ENST00000487026 CHCHD2P9Q5T1J5 151 aaPredicted RBP24.3■■□□□ 1.48
LIME1-206ENST00000487026 LRRC38Q5VT99 294 aa24.3■■□□□ 1.48
LIME1-206ENST00000487026 VSIG1Q86XK7 387 aa24.3■■□□□ 1.48
LIME1-206ENST00000487026 DTX1Q86Y01 620 aa24.3■■□□□ 1.48
LIME1-206ENST00000487026 RHOT1Q8IXI2 618 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms