RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 TRPC4APQ8TEL6 797 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 CCDC12Q8WUD4 166 aaPredicted RBP5.53□□□□□ -1.52
SF1-217ENST00000486960 PDCD6IPQ8WUM4 868 aaKnown RBP5.53□□□□□ -1.52
SF1-217ENST00000486960 KBTBD7Q8WVZ9 684 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 GLMPQ8WWB7 406 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 LPIN2Q92539 896 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 SLC9A6Q92581 669 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 SAAL1Q96ER3 474 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 CCDC51Q96ER9 411 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 RPRD1AQ96P16 312 aaPredicted RBP5.53□□□□□ -1.52
SF1-217ENST00000486960 DGAT2Q96PD7 388 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 CDK15Q96Q40 435 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 NR1H4Q96RI1 486 aaPredicted RBP5.53□□□□□ -1.52
SF1-217ENST00000486960 GORASP1Q9BQQ3 440 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 MRPL1Q9BYD6 325 aaKnown RBP5.53□□□□□ -1.52
SF1-217ENST00000486960 WDR11Q9BZH6 1224 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 TTYH3Q9C0H2 523 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 IKZF4Q9H2S9 585 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 KCNF1Q9H3M0 494 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 MVB12BQ9H7P6 319 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 SCPEP1Q9HB40 452 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 PCDHB16Q9NRJ7 776 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 ZDHHC7Q9NXF8 308 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 KLHL9Q9P2J3 617 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 LRIT1Q9P2V4 623 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 GULP1Q9UBP9 304 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.53□□□□□ -1.52
SF1-217ENST00000486960 SLCO3A1Q9UIG8 710 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 FBXL21Q9UKT6 434 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 PCDHA6Q9UN73 950 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 AP4E1Q9UPM8 1137 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 MRPS7Q9Y2R9 242 aaKnown RBP5.53□□□□□ -1.52
SF1-217ENST00000486960 PTRH2Q9Y3E5 179 aaKnown RBP5.53□□□□□ -1.52
SF1-217ENST00000486960 SDK1Q7Z5N4 2213 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 CACNA1DQ01668 2161 aa5.53□□□□□ -1.52
SF1-217ENST00000486960 GRIN2DO15399 1336 aa5.52□□□□□ -1.53
SF1-217ENST00000486960 MROH7Q68CQ1 1323 aa5.52□□□□□ -1.53
SF1-217ENST00000486960 AKAP9Q99996 3911 aa5.52□□□□□ -1.53
SF1-217ENST00000486960 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.52□□□□□ -1.53
SF1-217ENST00000486960 A0A1W2PPW3 197 aa5.52□□□□□ -1.53
SF1-217ENST00000486960 OOEPA6NGQ2 149 aa5.52□□□□□ -1.53
SF1-217ENST00000486960 SAC3D1A6NKF1 404 aa5.52□□□□□ -1.53
SF1-217ENST00000486960 EIF4E1BA6NMX2 242 aaKnown RBP5.52□□□□□ -1.53
SF1-217ENST00000486960 PRR23D1E9PI22 279 aaPredicted RBP5.52□□□□□ -1.53
SF1-217ENST00000486960 GCOM1H8Y6P7 765 aaPredicted RBP5.52□□□□□ -1.53
SF1-217ENST00000486960 J3QKU1 62 aa5.52□□□□□ -1.53
SF1-217ENST00000486960 SHOXO15266 292 aa5.52□□□□□ -1.53
SF1-217ENST00000486960 ADCY6O43306 1168 aa5.52□□□□□ -1.53
SF1-217ENST00000486960 TULP3O75386 442 aa5.52□□□□□ -1.53
SF1-217ENST00000486960 CLN5O75503 358 aa5.52□□□□□ -1.53
SF1-217ENST00000486960 SURF6O75683 361 aaKnown RBP5.52□□□□□ -1.53
SF1-217ENST00000486960 MFN2O95140 757 aa5.52□□□□□ -1.53
SF1-217ENST00000486960 SPDEFO95238 335 aa5.52□□□□□ -1.53
SF1-217ENST00000486960 CD2BP2O95400 341 aaKnown RBP5.52□□□□□ -1.53
SF1-217ENST00000486960 DDAH2O95865 285 aa5.52□□□□□ -1.53
SF1-217ENST00000486960 AGTP01019 485 aa5.52□□□□□ -1.53
SF1-217ENST00000486960 PENKP01210 267 aaPredicted RBP5.52□□□□□ -1.53
SF1-217ENST00000486960 MPOP05164 745 aa5.52□□□□□ -1.53
SF1-217ENST00000486960 URODP06132 367 aa5.52□□□□□ -1.53
SF1-217ENST00000486960 PRR23D2P0DMB1 279 aaPredicted RBP5.52□□□□□ -1.53
SF1-217ENST00000486960 ODC1P11926 461 aa5.52□□□□□ -1.53
SF1-217ENST00000486960 PECAM1P16284 738 aaPredicted RBP5.52□□□□□ -1.53
SF1-217ENST00000486960 EGR1P18146 543 aa5.52□□□□□ -1.53
SF1-217ENST00000486960 KRT15P19012 456 aa5.52□□□□□ -1.53
SF1-217ENST00000486960 CPN2P22792 545 aa5.52□□□□□ -1.53
SF1-217ENST00000486960 NMT1P30419 496 aaKnown RBP5.52□□□□□ -1.53
SF1-217ENST00000486960 SFNP31947 248 aa5.52□□□□□ -1.53
SF1-217ENST00000486960 GRK3P35626 688 aa5.52□□□□□ -1.53
SF1-217ENST00000486960 ME1P48163 572 aa5.52□□□□□ -1.53
SF1-217ENST00000486960 CCR3P51677 355 aa5.52□□□□□ -1.53
SF1-217ENST00000486960 ARSEP51690 589 aa5.52□□□□□ -1.53
SF1-217ENST00000486960 ARFIP2P53365 341 aa5.52□□□□□ -1.53
SF1-217ENST00000486960 ATP12AP54707 1039 aa5.52□□□□□ -1.53
SF1-217ENST00000486960 LGALS4P56470 323 aa5.52□□□□□ -1.53
SF1-217ENST00000486960 PLAURQ03405 335 aa5.52□□□□□ -1.53
SF1-217ENST00000486960 LIPEQ05469 1076 aa5.52□□□□□ -1.53
SF1-217ENST00000486960 ZNF177Q13360 481 aaPredicted RBP5.52□□□□□ -1.53
SF1-217ENST00000486960 STIM1Q13586 685 aa5.52□□□□□ -1.53
SF1-217ENST00000486960 CCINQ13939 588 aa5.52□□□□□ -1.53
SF1-217ENST00000486960 BAATQ14032 418 aaPredicted RBP5.52□□□□□ -1.53
SF1-217ENST00000486960 TOB2Q14106 344 aaPredicted RBP5.52□□□□□ -1.53
SF1-217ENST00000486960 LPIN1Q14693 890 aa5.52□□□□□ -1.53
SF1-217ENST00000486960 IFI16Q16666 785 aaKnown RBP5.52□□□□□ -1.53
SF1-217ENST00000486960 SMTNL2Q2TAL5 461 aa5.52□□□□□ -1.53
SF1-217ENST00000486960 C10orf120Q5SQS8 335 aa5.52□□□□□ -1.53
SF1-217ENST00000486960 MFSD14BQ5SR56 506 aa5.52□□□□□ -1.53
SF1-217ENST00000486960 FKBP1CQ5VVH2 108 aa5.52□□□□□ -1.53
SF1-217ENST00000486960 PTRHD1Q6GMV3 140 aaKnown RBP5.52□□□□□ -1.53
SF1-217ENST00000486960 RAET1GQ6H3X3 334 aa5.52□□□□□ -1.53
SF1-217ENST00000486960 THOC7Q6I9Y2 204 aaKnown RBP5.52□□□□□ -1.53
SF1-217ENST00000486960 SARM1Q6SZW1 724 aa5.52□□□□□ -1.53
SF1-217ENST00000486960 ZNF704Q6ZNC4 412 aaPredicted RBP5.52□□□□□ -1.53
SF1-217ENST00000486960 MICALCLQ6ZW33 695 aa5.52□□□□□ -1.53
SF1-217ENST00000486960 TRMT10CQ7L0Y3 403 aaKnown RBP5.52□□□□□ -1.53
SF1-217ENST00000486960 SYT13Q7L8C5 426 aa5.52□□□□□ -1.53
SF1-217ENST00000486960 LRRC70Q7Z2Q7 622 aa5.52□□□□□ -1.53
SF1-217ENST00000486960 EFL1Q7Z2Z2 1120 aaKnown RBP5.52□□□□□ -1.53
SF1-217ENST00000486960 KANSL1Q7Z3B3 1105 aa5.52□□□□□ -1.53
SF1-217ENST00000486960 SYVN1Q86TM6 617 aa5.52□□□□□ -1.53
SF1-217ENST00000486960 AMZ2Q86W34 360 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms