RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, human

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNRNP40-205	ENST00000486941	HYI	Q5T013	277 aa		4.23	□□□□□ -1.73
SNRNP40-205	ENST00000486941	CERCAM	Q5T4B2	595 aa		4.23	□□□□□ -1.73
SNRNP40-205	ENST00000486941	LMBRD2	Q68DH5	695 aa	Predicted RBP	4.23	□□□□□ -1.73
SNRNP40-205	ENST00000486941	CENPP	Q6IPU0	288 aa		4.23	□□□□□ -1.73
SNRNP40-205	ENST00000486941	HAUS6	Q7Z4H7	955 aa		4.23	□□□□□ -1.73
SNRNP40-205	ENST00000486941	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	4.23	□□□□□ -1.73
SNRNP40-205	ENST00000486941	ITIH5	Q86UX2	942 aa		4.23	□□□□□ -1.73
SNRNP40-205	ENST00000486941	TMC8	Q8IU68	726 aa		4.23	□□□□□ -1.73
SNRNP40-205	ENST00000486941	ARID3B	Q8IVW6	561 aa	Predicted RBP	4.23	□□□□□ -1.73
SNRNP40-205	ENST00000486941	SYT2	Q8N9I0	419 aa	Predicted RBP	4.23	□□□□□ -1.73
SNRNP40-205	ENST00000486941	TMEM161B	Q8NDZ6	487 aa		4.23	□□□□□ -1.73
SNRNP40-205	ENST00000486941	PSMG2	Q969U7	264 aa		4.23	□□□□□ -1.73
SNRNP40-205	ENST00000486941	MTFMT	Q96DP5	389 aa	Known RBP	4.23	□□□□□ -1.73
SNRNP40-205	ENST00000486941	ZSCAN31	Q96LW9	406 aa	Predicted RBP	4.23	□□□□□ -1.73
SNRNP40-205	ENST00000486941	LRRC3B	Q96PB8	259 aa		4.23	□□□□□ -1.73
SNRNP40-205	ENST00000486941	MMTAG2	Q9BU76	263 aa	Known RBP	4.23	□□□□□ -1.73
SNRNP40-205	ENST00000486941	TASP1	Q9H6P5	420 aa		4.23	□□□□□ -1.73
SNRNP40-205	ENST00000486941	KCND2	Q9NZV8	630 aa		4.23	□□□□□ -1.73
SNRNP40-205	ENST00000486941	LARS	Q9P2J5	1176 aa	Known RBP	4.23	□□□□□ -1.73
SNRNP40-205	ENST00000486941	TUBGCP4	Q9UGJ1	667 aa		4.23	□□□□□ -1.73
SNRNP40-205	ENST00000486941	UBQLN1	Q9UMX0	589 aa	Known RBP	4.23	□□□□□ -1.73
SNRNP40-205	ENST00000486941	ANKRD6	Q9Y2G4	727 aa		4.23	□□□□□ -1.73
SNRNP40-205	ENST00000486941	YIPF1	Q9Y548	306 aa		4.23	□□□□□ -1.73
SNRNP40-205	ENST00000486941	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	4.23	□□□□□ -1.73
SNRNP40-205	ENST00000486941	OBSL1	O75147	1896 aa		4.23	□□□□□ -1.73
SNRNP40-205	ENST00000486941	ASCC3	Q8N3C0	2202 aa	Known RBP	4.23	□□□□□ -1.73
SNRNP40-205	ENST00000486941	THADA	Q6YHU6	1953 aa		4.23	□□□□□ -1.73
SNRNP40-205	ENST00000486941	ANAPC1	Q9H1A4	1944 aa		4.23	□□□□□ -1.73
SNRNP40-205	ENST00000486941	MYO16	Q9Y6X6	1858 aa		4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	MYOF	Q9NZM1	2061 aa		4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	MTMR11	A4FU01	709 aa		4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	PP2D1	A8MPX8	630 aa		4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	LACTBL1	A8MY62	500 aa		4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941		H3BML4	177 aa		4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	PIR	O00625	290 aa		4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	OGT	O15294	1046 aa		4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	FAM189A1	O60320	539 aa		4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	ATG13	O75143	517 aa		4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	AKAP3	O75969	853 aa		4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	PIGR	P01833	764 aa		4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	CRYAB	P02511	175 aa	Known RBP	4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	OR4Q2	P0C623	313 aa		4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	ZNF806	P0C7X5	589 aa		4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	CXCL8	P10145	99 aa		4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	HGF	P14210	728 aa		4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	CREB1	P16220	341 aa		4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	GABRR2	P28476	465 aa		4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	CDC25A	P30304	524 aa		4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	CDC25C	P30307	473 aa		4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	AGFG1	P52594	562 aa	Known RBP	4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	POU5F1	Q01860	360 aa	Known RBP	4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	SPAG1	Q07617	926 aa		4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	DMWD	Q09019	674 aa		4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	SMARCB1	Q12824	385 aa		4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	SLC13A2	Q13183	592 aa		4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	PON2	Q15165	354 aa		4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	IL17A	Q16552	155 aa		4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	ST3GAL2	Q16842	350 aa		4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	ITPRIPL2	Q3MIP1	535 aa		4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	ARHGAP15	Q53QZ3	475 aa		4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	STXBP5	Q5T5C0	1151 aa		4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	UBAP2	Q5T6F2	1119 aa	Known RBP	4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	SPATA1	Q5VX52	437 aa		4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	ARMCX5	Q6P1M9	558 aa		4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	TMEM65	Q6PI78	240 aa		4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	DSTYK	Q6XUX3	929 aa		4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	ZNF783	Q6ZMS7	281 aa		4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	DCDC5	Q6ZRR9	648 aa		4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941		Q6ZS52	159 aa		4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	CACNA2D4	Q7Z3S7	1137 aa		4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	WDR5B	Q86VZ2	330 aa		4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	CCDC83	Q8IWF9	413 aa		4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	CD302	Q8IX05	232 aa		4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	MPP5	Q8N3R9	675 aa		4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	FAM184A	Q8NB25	1140 aa		4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	ATAD1	Q8NBU5	361 aa		4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	SPATA3	Q8NHX4	192 aa		4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	C2orf15	Q8WU43	125 aa	Known RBP	4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	SENP8	Q96LD8	212 aa		4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	PGLYRP2	Q96PD5	576 aa		4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	RPF1	Q9H9Y2	349 aa	Known RBP	4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	C2orf42	Q9NWW7	574 aa		4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	GTSE1	Q9NYZ3	720 aa		4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	DERA	Q9Y315	318 aa		4.22	□□□□□ -1.73
SNRNP40-205	ENST00000486941	ATRX	P46100	2492 aa		4.21	□□□□□ -1.73
SNRNP40-205	ENST00000486941	TSC2	P49815	1807 aa		4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	ANO9	A1A5B4	782 aa		4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	C16orf96	A6NNT2	1141 aa		4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	TRDMT1	O14717	391 aa	Known RBP	4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	HNRNPDL	O14979	420 aa	Known RBP	4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	EXTL3	O43909	919 aa		4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	SRGAP2	O75044	1071 aa		4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	RPP40	O75818	363 aa	Known RBP	4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	EPN2	O95208	641 aa		4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	PRAMEF12	O95522	483 aa		4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	PLA2G4B	P0C869	781 aa		4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	HAPLN1	P10915	354 aa	Predicted RBP	4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	ODC1	P11926	461 aa		4.21	□□□□□ -1.74
SNRNP40-205	ENST00000486941	ABCD1	P33897	745 aa		4.21	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms