RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 RNF219Q5W0B1 726 aaPredicted RBP17.88■□□□□ 0.45
PDLIM7-207ENST00000486828 CXorf57Q6NSI4 855 aaKnown RBP17.88■□□□□ 0.45
PDLIM7-207ENST00000486828 UGT2A3Q6UWM9 527 aa17.88■□□□□ 0.45
PDLIM7-207ENST00000486828 MFN1Q8IWA4 741 aa17.88■□□□□ 0.45
PDLIM7-207ENST00000486828 TMEM102Q8N9M5 508 aaPredicted RBP17.88■□□□□ 0.45
PDLIM7-207ENST00000486828 RIN3Q8TB24 985 aa17.88■□□□□ 0.45
PDLIM7-207ENST00000486828 SMIM14Q96QK8 99 aa17.88■□□□□ 0.45
PDLIM7-207ENST00000486828 ADGRE3Q9BY15 652 aa17.88■□□□□ 0.45
PDLIM7-207ENST00000486828 SEZ6LQ9BYH1 1024 aa17.88■□□□□ 0.45
PDLIM7-207ENST00000486828 TUBB1Q9H4B7 451 aa17.88■□□□□ 0.45
PDLIM7-207ENST00000486828 AFF4Q9UHB7 1163 aaKnown RBP17.88■□□□□ 0.45
PDLIM7-207ENST00000486828 ANKRD66B4E2M5 251 aa17.88■□□□□ 0.45
PDLIM7-207ENST00000486828 AP1G1O43747 822 aa17.88■□□□□ 0.45
PDLIM7-207ENST00000486828 TSPAN3O60637 253 aa17.88■□□□□ 0.45
PDLIM7-207ENST00000486828 RNASEH2AO75792 299 aaKnown RBP17.88■□□□□ 0.45
PDLIM7-207ENST00000486828 SEC24AO95486 1093 aa17.88■□□□□ 0.45
PDLIM7-207ENST00000486828 RPS17P08708 135 aaKnown RBP17.88■□□□□ 0.45
PDLIM7-207ENST00000486828 PKMP14618 531 aaKnown RBP17.88■□□□□ 0.45
PDLIM7-207ENST00000486828 PEX19P40855 299 aa17.88■□□□□ 0.45
PDLIM7-207ENST00000486828 CDKN1CP49918 316 aaPredicted RBP17.88■□□□□ 0.45
PDLIM7-207ENST00000486828 NAA20P61599 178 aa17.88■□□□□ 0.45
PDLIM7-207ENST00000486828 ARF5P84085 180 aa17.88■□□□□ 0.45
PDLIM7-207ENST00000486828 RHDQ02161 417 aa17.88■□□□□ 0.45
PDLIM7-207ENST00000486828 TLR1Q15399 786 aa17.88■□□□□ 0.45
PDLIM7-207ENST00000486828 IL23RQ5VWK5 629 aa17.88■□□□□ 0.45
PDLIM7-207ENST00000486828 ANKS6Q68DC2 871 aa17.88■□□□□ 0.45
PDLIM7-207ENST00000486828 PSAPL1Q6NUJ1 521 aa17.88■□□□□ 0.45
PDLIM7-207ENST00000486828 C16orf59Q7L2K0 433 aa17.88■□□□□ 0.45
PDLIM7-207ENST00000486828 DDIASQ8IXT1 998 aa17.88■□□□□ 0.45
PDLIM7-207ENST00000486828 PCYOX1LQ8NBM8 494 aa17.88■□□□□ 0.45
PDLIM7-207ENST00000486828 ATP6V1E2Q96A05 226 aa17.88■□□□□ 0.45
PDLIM7-207ENST00000486828 FUBP1Q96AE4 644 aaKnown RBP17.88■□□□□ 0.45
PDLIM7-207ENST00000486828 KCNA7Q96RP8 456 aa17.88■□□□□ 0.45
PDLIM7-207ENST00000486828 MUC3BQ9H195 1237 aa17.88■□□□□ 0.45
PDLIM7-207ENST00000486828 FKBPLQ9UIM3 349 aa17.88■□□□□ 0.45
PDLIM7-207ENST00000486828 A0A0J9YYE9 177 aa17.87■□□□□ 0.45
PDLIM7-207ENST00000486828 CDC7O00311 574 aa17.87■□□□□ 0.45
PDLIM7-207ENST00000486828 STX16O14662 325 aa17.87■□□□□ 0.45
PDLIM7-207ENST00000486828 PFDN6O15212 129 aa17.87■□□□□ 0.45
PDLIM7-207ENST00000486828 KLK8O60259 260 aa17.87■□□□□ 0.45
PDLIM7-207ENST00000486828 DNAJA2O60884 412 aa17.87■□□□□ 0.45
PDLIM7-207ENST00000486828 VPS26AO75436 327 aa17.87■□□□□ 0.45
PDLIM7-207ENST00000486828 IRF1P10914 325 aa17.87■□□□□ 0.45
PDLIM7-207ENST00000486828 LBPP18428 481 aa17.87■□□□□ 0.45
PDLIM7-207ENST00000486828 CD9P21926 228 aa17.87■□□□□ 0.45
PDLIM7-207ENST00000486828 MC4RP32245 332 aa17.87■□□□□ 0.45
PDLIM7-207ENST00000486828 ALDH7A1P49419 539 aaKnown RBP17.87■□□□□ 0.45
PDLIM7-207ENST00000486828 TTPAP49638 278 aa17.87■□□□□ 0.45
PDLIM7-207ENST00000486828 GRB7Q14451 532 aa17.87■□□□□ 0.45
PDLIM7-207ENST00000486828 LAYNQ6UX15 382 aa17.87■□□□□ 0.45
PDLIM7-207ENST00000486828 PIANPQ8IYJ0 282 aa17.87■□□□□ 0.45
PDLIM7-207ENST00000486828 MIER2Q8N344 545 aa17.87■□□□□ 0.45
PDLIM7-207ENST00000486828 DUS3LQ96G46 650 aaKnown RBP17.87■□□□□ 0.45
PDLIM7-207ENST00000486828 MYRFLQ96LU7 910 aa17.87■□□□□ 0.45
PDLIM7-207ENST00000486828 C1QTNF3Q9BXJ4 246 aa17.87■□□□□ 0.45
PDLIM7-207ENST00000486828 KLF16Q9BXK1 252 aaPredicted RBP17.87■□□□□ 0.45
PDLIM7-207ENST00000486828 GALPQ9UBC7 116 aa17.87■□□□□ 0.45
PDLIM7-207ENST00000486828 OGDHLQ9ULD0 1010 aa17.87■□□□□ 0.45
PDLIM7-207ENST00000486828 AP4S1Q9Y587 144 aa17.87■□□□□ 0.45
PDLIM7-207ENST00000486828 C15orf38-AP3S2A0A0A6YYH1 394 aa17.86■□□□□ 0.45
PDLIM7-207ENST00000486828 NPEPPSL1A6NEC2 478 aa17.86■□□□□ 0.45
PDLIM7-207ENST00000486828 VPS4BO75351 444 aa17.86■□□□□ 0.45
PDLIM7-207ENST00000486828 TMCC1O94876 653 aa17.86■□□□□ 0.45
PDLIM7-207ENST00000486828 MATN4O95460 622 aa17.86■□□□□ 0.45
PDLIM7-207ENST00000486828 CD160O95971 181 aa17.86■□□□□ 0.45
PDLIM7-207ENST00000486828 HSPA13P48723 471 aa17.86■□□□□ 0.45
PDLIM7-207ENST00000486828 IRX1P78414 480 aaPredicted RBP17.86■□□□□ 0.45
PDLIM7-207ENST00000486828 TRAF2Q12933 501 aa17.86■□□□□ 0.45
PDLIM7-207ENST00000486828 C6orf10Q5SRN2 563 aa17.86■□□□□ 0.45
PDLIM7-207ENST00000486828 TXNDC11Q6PKC3 985 aa17.86■□□□□ 0.45
PDLIM7-207ENST00000486828 ARPINQ7Z6K5 226 aa17.86■□□□□ 0.45
PDLIM7-207ENST00000486828 RETREG3Q86VR2 466 aa17.86■□□□□ 0.45
PDLIM7-207ENST00000486828 RNF168Q8IYW5 571 aaPredicted RBP17.86■□□□□ 0.45
PDLIM7-207ENST00000486828 WBP2Q969T9 261 aa17.86■□□□□ 0.45
PDLIM7-207ENST00000486828 SLC30A3Q99726 388 aa17.86■□□□□ 0.45
PDLIM7-207ENST00000486828 VN1R3Q9BXE9 311 aa17.86■□□□□ 0.45
PDLIM7-207ENST00000486828 RNF38Q9H0F5 515 aa17.86■□□□□ 0.45
PDLIM7-207ENST00000486828 GIMAP2Q9UG22 337 aa17.86■□□□□ 0.45
PDLIM7-207ENST00000486828 POLG2Q9UHN1 485 aa17.86■□□□□ 0.45
PDLIM7-207ENST00000486828 CNOT11Q9UKZ1 510 aaKnown RBP17.86■□□□□ 0.45
PDLIM7-207ENST00000486828 NDUFAF1Q9Y375 327 aa17.86■□□□□ 0.45
PDLIM7-207ENST00000486828 TET1Q8NFU7 2136 aa17.86■□□□□ 0.45
PDLIM7-207ENST00000486828 MKI67P46013 3256 aaKnown RBP17.86■□□□□ 0.45
PDLIM7-207ENST00000486828 TCRBV3S1A0A5B6 114 aa17.86■□□□□ 0.45
PDLIM7-207ENST00000486828 BTN3A1O00481 513 aa17.86■□□□□ 0.45
PDLIM7-207ENST00000486828 NR5A2O00482 541 aa17.86■□□□□ 0.45
PDLIM7-207ENST00000486828 FESP07332 822 aa17.86■□□□□ 0.45
PDLIM7-207ENST00000486828 CLCN4P51793 760 aa17.86■□□□□ 0.45
PDLIM7-207ENST00000486828 CTSL3PQ5NE16 218 aa17.86■□□□□ 0.45
PDLIM7-207ENST00000486828 NCEH1Q6PIU2 408 aa17.86■□□□□ 0.45
PDLIM7-207ENST00000486828 ZNF783Q6ZMS7 281 aa17.86■□□□□ 0.45
PDLIM7-207ENST00000486828 TTC30BQ8N4P2 665 aa17.86■□□□□ 0.45
PDLIM7-207ENST00000486828 EFHBQ8N7U6 833 aa17.86■□□□□ 0.45
PDLIM7-207ENST00000486828 TUBGCP3Q96CW5 907 aa17.86■□□□□ 0.45
PDLIM7-207ENST00000486828 CYP2S1Q96SQ9 504 aa17.86■□□□□ 0.45
PDLIM7-207ENST00000486828 CLSTN3Q9BQT9 956 aa17.86■□□□□ 0.45
PDLIM7-207ENST00000486828 GPATCH1Q9BRR8 931 aaKnown RBP17.86■□□□□ 0.45
PDLIM7-207ENST00000486828 SLC24A3Q9HC58 644 aa17.86■□□□□ 0.45
PDLIM7-207ENST00000486828 SEMA4BQ9NPR2 832 aaPredicted RBP17.86■□□□□ 0.45
PDLIM7-207ENST00000486828 HSFX1Q9UBD0 423 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms