RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 SNX5Q9Y5X3 404 aa13.17□□□□□ -0.3
HMGN1-216ENST00000486741 NRXN2Q9P2S2 1712 aa13.17□□□□□ -0.3
HMGN1-216ENST00000486741 FAM149AA5PLN7 773 aa13.17□□□□□ -0.3
HMGN1-216ENST00000486741 OR2AG2A6NM03 316 aa13.17□□□□□ -0.3
HMGN1-216ENST00000486741 H3BMM5 538 aa13.17□□□□□ -0.3
HMGN1-216ENST00000486741 TRIM38O00635 465 aa13.17□□□□□ -0.3
HMGN1-216ENST00000486741 TIPRLO75663 272 aa13.17□□□□□ -0.3
HMGN1-216ENST00000486741 GJB3O75712 270 aa13.17□□□□□ -0.3
HMGN1-216ENST00000486741 ANXA5P08758 320 aa13.17□□□□□ -0.3
HMGN1-216ENST00000486741 SLC35E2BP0CK96 405 aa13.17□□□□□ -0.3
HMGN1-216ENST00000486741 GGT5P36269 586 aa13.17□□□□□ -0.3
HMGN1-216ENST00000486741 CBX2Q14781 532 aaPredicted RBP13.17□□□□□ -0.3
HMGN1-216ENST00000486741 AP5B1Q2VPB7 878 aa13.17□□□□□ -0.3
HMGN1-216ENST00000486741 FNDC3BQ53EP0 1204 aaKnown RBP13.17□□□□□ -0.3
HMGN1-216ENST00000486741 PM20D1Q6GTS8 502 aa13.17□□□□□ -0.3
HMGN1-216ENST00000486741 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.17□□□□□ -0.31e-8■■■□□ 16.2
HMGN1-216ENST00000486741 TAS1R1Q7RTX1 841 aa13.17□□□□□ -0.3
HMGN1-216ENST00000486741 PGBD3Q8N328 593 aa13.17□□□□□ -0.3
HMGN1-216ENST00000486741 SNRNP27Q8WVK2 155 aaKnown RBP13.17□□□□□ -0.3
HMGN1-216ENST00000486741 DPF3Q92784 378 aa13.17□□□□□ -0.3
HMGN1-216ENST00000486741 VPS33AQ96AX1 596 aa13.17□□□□□ -0.3
HMGN1-216ENST00000486741 KCNA7Q96RP8 456 aa13.17□□□□□ -0.3
HMGN1-216ENST00000486741 GLYATL1P3A0A0U1RQE8 302 aa13.16□□□□□ -0.3
HMGN1-216ENST00000486741 A0A1W2PQ67 120 aa13.16□□□□□ -0.3
HMGN1-216ENST00000486741 LRRC14BA6NHZ5 514 aa13.16□□□□□ -0.3
HMGN1-216ENST00000486741 PGFP49763 221 aa13.16□□□□□ -0.3
HMGN1-216ENST00000486741 IRGCQ6NXR0 463 aa13.16□□□□□ -0.3
HMGN1-216ENST00000486741 STK32CQ86UX6 486 aa13.16□□□□□ -0.3
HMGN1-216ENST00000486741 CILP2Q8IUL8 1156 aa13.16□□□□□ -0.3
HMGN1-216ENST00000486741 ZNF461Q8TAF7 563 aa13.16□□□□□ -0.3
HMGN1-216ENST00000486741 LPGAT1Q92604 370 aa13.16□□□□□ -0.3
HMGN1-216ENST00000486741 FEM1CQ96JP0 617 aa13.16□□□□□ -0.3
HMGN1-216ENST00000486741 TSGA13Q96PP4 275 aa13.16□□□□□ -0.3
HMGN1-216ENST00000486741 KIAA1522Q9P206 1035 aaPredicted RBP13.16□□□□□ -0.3
HMGN1-216ENST00000486741 GALPQ9UBC7 116 aa13.16□□□□□ -0.3
HMGN1-216ENST00000486741 MTF2Q9Y483 593 aaPredicted RBP13.16□□□□□ -0.3
HMGN1-216ENST00000486741 MLYCDO95822 493 aa13.16□□□□□ -0.3
HMGN1-216ENST00000486741 ITGBL1O95965 494 aaPredicted RBP13.16□□□□□ -0.3
HMGN1-216ENST00000486741 IL1BP01584 269 aa13.16□□□□□ -0.3
HMGN1-216ENST00000486741 CES1P23141 567 aa13.16□□□□□ -0.3
HMGN1-216ENST00000486741 GSSP48637 474 aa13.16□□□□□ -0.3
HMGN1-216ENST00000486741 SH3BGRP55822 239 aaPredicted RBP13.16□□□□□ -0.3
HMGN1-216ENST00000486741 POLR2LP62875 67 aaKnown RBP13.16□□□□□ -0.3
HMGN1-216ENST00000486741 DYNC1I2Q13409 638 aaKnown RBP13.16□□□□□ -0.3
HMGN1-216ENST00000486741 ZIK1Q3SY52 487 aaPredicted RBP13.16□□□□□ -0.3
HMGN1-216ENST00000486741 SPDYE7PQ495Y7 208 aa13.16□□□□□ -0.3
HMGN1-216ENST00000486741 ADAMTSL2Q86TH1 951 aa13.16□□□□□ -0.3
HMGN1-216ENST00000486741 CENPLQ8N0S6 344 aaPredicted RBP13.16□□□□□ -0.3
HMGN1-216ENST00000486741 RBFAQ8N0V3 343 aa13.16□□□□□ -0.3
HMGN1-216ENST00000486741 TMEM248Q9NWD8 314 aa13.16□□□□□ -0.3
HMGN1-216ENST00000486741 LNPEPQ9UIQ6 1025 aa13.16□□□□□ -0.3
HMGN1-216ENST00000486741 MCM8Q9UJA3 840 aa13.16□□□□□ -0.3
HMGN1-216ENST00000486741 POLR3HQ9Y535 204 aaPredicted RBP13.16□□□□□ -0.3
HMGN1-216ENST00000486741 MGAT4DA6NG13 374 aa13.16□□□□□ -0.3
HMGN1-216ENST00000486741 M0QZQ0 153 aa13.16□□□□□ -0.3
HMGN1-216ENST00000486741 VCLP18206 1134 aa13.16□□□□□ -0.3
HMGN1-216ENST00000486741 LAG3P18627 525 aa13.16□□□□□ -0.3
HMGN1-216ENST00000486741 VAC14Q08AM6 782 aa13.16□□□□□ -0.3
HMGN1-216ENST00000486741 SETMARQ53H47 684 aaPredicted RBP13.16□□□□□ -0.3
HMGN1-216ENST00000486741 ZNF621Q6ZSS3 439 aa13.16□□□□□ -0.3
HMGN1-216ENST00000486741 PQLC1Q8N2U9 271 aa13.16□□□□□ -0.3
HMGN1-216ENST00000486741 NRBF2Q96F24 287 aa13.16□□□□□ -0.3
HMGN1-216ENST00000486741 TSSK3Q96PN8 268 aa13.16□□□□□ -0.3
HMGN1-216ENST00000486741 C20orf27Q9GZN8 174 aa13.16□□□□□ -0.3
HMGN1-216ENST00000486741 PAPOLBQ9NRJ5 636 aaKnown RBP13.16□□□□□ -0.3
HMGN1-216ENST00000486741 ARHGAP10A1A4S6 786 aa13.16□□□□□ -0.3
HMGN1-216ENST00000486741 WFS1O76024 890 aa13.16□□□□□ -0.3
HMGN1-216ENST00000486741 T-ENOLP0DO92 83 aa13.16□□□□□ -0.3
HMGN1-216ENST00000486741 PPP1R3AQ16821 1122 aa13.16□□□□□ -0.3
HMGN1-216ENST00000486741 MTX3Q5HYI7 312 aa13.16□□□□□ -0.3
HMGN1-216ENST00000486741 C2orf73Q8N5S3 287 aaPredicted RBP13.16□□□□□ -0.3
HMGN1-216ENST00000486741 TRMOQ9BU70 441 aa13.16□□□□□ -0.3
HMGN1-216ENST00000486741 ACAT2Q9BWD1 397 aa13.16□□□□□ -0.3
HMGN1-216ENST00000486741 IPPKQ9H8X2 491 aa13.16□□□□□ -0.3
HMGN1-216ENST00000486741 TNPO3Q9Y5L0 923 aaKnown RBP13.16□□□□□ -0.3
HMGN1-216ENST00000486741 COPG1Q9Y678 874 aaKnown RBP13.16□□□□□ -0.3
HMGN1-216ENST00000486741 CNTRLQ7Z7A1 2325 aa13.15□□□□□ -0.3
HMGN1-216ENST00000486741 OR1I1O60431 355 aa13.15□□□□□ -0.3
HMGN1-216ENST00000486741 ADAMTS4O75173 837 aa13.15□□□□□ -0.3
HMGN1-216ENST00000486741 XRCC1P18887 633 aaPredicted RBP13.15□□□□□ -0.3
HMGN1-216ENST00000486741 THOP1P52888 689 aa13.15□□□□□ -0.3
HMGN1-216ENST00000486741 MAPK10P53779 464 aa13.15□□□□□ -0.3
HMGN1-216ENST00000486741 GCNT7Q6ZNI0 430 aa13.15□□□□□ -0.3
HMGN1-216ENST00000486741 SPPL2CQ8IUH8 684 aa13.15□□□□□ -0.3
HMGN1-216ENST00000486741 UCMAQ8WVF2 138 aa13.15□□□□□ -0.3
HMGN1-216ENST00000486741 CIB1Q99828 191 aa13.15□□□□□ -0.3
HMGN1-216ENST00000486741 OSER1Q9NX31 292 aa13.15□□□□□ -0.3
HMGN1-216ENST00000486741 ANKRD66B4E2M5 251 aa13.15□□□□□ -0.3
HMGN1-216ENST00000486741 OAZ2O95190 189 aa13.15□□□□□ -0.3
HMGN1-216ENST00000486741 OAS1P00973 400 aaKnown RBP13.15□□□□□ -0.3
HMGN1-216ENST00000486741 GSNP06396 782 aa13.15□□□□□ -0.3
HMGN1-216ENST00000486741 ITGAXP20702 1163 aa13.15□□□□□ -0.3
HMGN1-216ENST00000486741 CYP2A7P20853 494 aa13.15□□□□□ -0.3
HMGN1-216ENST00000486741 CCNFP41002 786 aa13.15□□□□□ -0.3
HMGN1-216ENST00000486741 PRKG2Q13237 762 aa13.15□□□□□ -0.3
HMGN1-216ENST00000486741 SKIV2LQ15477 1246 aaKnown RBP13.15□□□□□ -0.3
HMGN1-216ENST00000486741 TNFAIP8L3Q5GJ75 292 aa13.15□□□□□ -0.3
HMGN1-216ENST00000486741 STEAP4Q687X5 459 aa13.15□□□□□ -0.3
HMGN1-216ENST00000486741 KREMEN2Q8NCW0 462 aa13.15□□□□□ -0.3
HMGN1-216ENST00000486741 GPR156Q8NFN8 814 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms