RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 CPA3P15088 417 aa14.54□□□□□ -0.08
POLR2J3-204ENST00000486319 RECQLP46063 649 aaPredicted RBP14.54□□□□□ -0.08
POLR2J3-204ENST00000486319 CCNHP51946 323 aaPredicted RBP14.54□□□□□ -0.08
POLR2J3-204ENST00000486319 MRPS21P82921 87 aaKnown RBP14.54□□□□□ -0.08
POLR2J3-204ENST00000486319 IFT88Q13099 833 aa14.54□□□□□ -0.08
POLR2J3-204ENST00000486319 PCLAFQ15004 111 aa14.54□□□□□ -0.08
POLR2J3-204ENST00000486319 ZNF789Q5FWF6 425 aa14.54□□□□□ -0.08
POLR2J3-204ENST00000486319 RBM20Q5T481 1227 aaKnown RBP14.54□□□□□ -0.08
POLR2J3-204ENST00000486319 HECTD2Q5U5R9 776 aa14.54□□□□□ -0.08
POLR2J3-204ENST00000486319 GRAMD4Q6IC98 578 aa14.54□□□□□ -0.08
POLR2J3-204ENST00000486319 SYT13Q7L8C5 426 aa14.54□□□□□ -0.08
POLR2J3-204ENST00000486319 TBC1D1Q86TI0 1168 aaPredicted RBP14.54□□□□□ -0.08
POLR2J3-204ENST00000486319 CEP97Q8IW35 865 aa14.54□□□□□ -0.08
POLR2J3-204ENST00000486319 PHTF2Q8N3S3 785 aa14.54□□□□□ -0.08
POLR2J3-204ENST00000486319 ZBTB44Q8NCP5 570 aa14.54□□□□□ -0.08
POLR2J3-204ENST00000486319 ZNF398Q8TD17 642 aa14.54□□□□□ -0.08
POLR2J3-204ENST00000486319 C7orf26Q96N11 449 aa14.54□□□□□ -0.08
POLR2J3-204ENST00000486319 ZNF641Q96N77 438 aaPredicted RBP14.54□□□□□ -0.08
POLR2J3-204ENST00000486319 POLR3BQ9NW08 1133 aaPredicted RBP14.54□□□□□ -0.08
POLR2J3-204ENST00000486319 IL17CQ9P0M4 197 aa14.54□□□□□ -0.08
POLR2J3-204ENST00000486319 VWA7Q9Y334 891 aa14.54□□□□□ -0.08
POLR2J3-204ENST00000486319 BPTFQ12830 3046 aa14.54□□□□□ -0.08
POLR2J3-204ENST00000486319 USP34Q70CQ2 3546 aa14.53□□□□□ -0.08
POLR2J3-204ENST00000486319 KIAA1549LQ6ZVL6 1849 aa14.53□□□□□ -0.08
POLR2J3-204ENST00000486319 ATP5BP06576 529 aaKnown RBP14.53□□□□□ -0.08
POLR2J3-204ENST00000486319 SRPRAP08240 638 aaKnown RBP14.53□□□□□ -0.08
POLR2J3-204ENST00000486319 CTPS1P17812 591 aa14.53□□□□□ -0.08
POLR2J3-204ENST00000486319 GRK2P25098 689 aa14.53□□□□□ -0.08
POLR2J3-204ENST00000486319 ALDH3A1P30838 453 aa14.53□□□□□ -0.08
POLR2J3-204ENST00000486319 HOXA6P31267 233 aa14.53□□□□□ -0.08
POLR2J3-204ENST00000486319 GKP32189 559 aa14.53□□□□□ -0.08
POLR2J3-204ENST00000486319 MC4RP32245 332 aa14.53□□□□□ -0.08
POLR2J3-204ENST00000486319 TIE1P35590 1138 aa14.53□□□□□ -0.08
POLR2J3-204ENST00000486319 SLC26A3P40879 764 aa14.53□□□□□ -0.08
POLR2J3-204ENST00000486319 BST1Q10588 318 aa14.53□□□□□ -0.08
POLR2J3-204ENST00000486319 STX3Q13277 289 aa14.53□□□□□ -0.08
POLR2J3-204ENST00000486319 GEN1Q17RS7 908 aa14.53□□□□□ -0.08
POLR2J3-204ENST00000486319 AARS2Q5JTZ9 985 aaKnown RBP14.53□□□□□ -0.08
POLR2J3-204ENST00000486319 RNF187Q5TA31 235 aaPredicted RBP14.53□□□□□ -0.08
POLR2J3-204ENST00000486319 LDB1Q86U70 411 aaPredicted RBP14.53□□□□□ -0.08
POLR2J3-204ENST00000486319 TERB1Q8NA31 727 aa14.53□□□□□ -0.08
POLR2J3-204ENST00000486319 ECHDC3Q96DC8 303 aa14.53□□□□□ -0.08
POLR2J3-204ENST00000486319 SMIM14Q96QK8 99 aa14.53□□□□□ -0.08
POLR2J3-204ENST00000486319 NDNQ99608 321 aa14.53□□□□□ -0.08
POLR2J3-204ENST00000486319 SUV39H2Q9H5I1 410 aa14.53□□□□□ -0.08
POLR2J3-204ENST00000486319 THAP1Q9NVV9 213 aa14.53□□□□□ -0.08
POLR2J3-204ENST00000486319 ZNF358Q9NW07 568 aa14.53□□□□□ -0.08
POLR2J3-204ENST00000486319 SLCO3A1Q9UIG8 710 aa14.53□□□□□ -0.08
POLR2J3-204ENST00000486319 FKBPLQ9UIM3 349 aa14.53□□□□□ -0.08
POLR2J3-204ENST00000486319 RUVBL2Q9Y230 463 aaKnown RBP14.53□□□□□ -0.08
POLR2J3-204ENST00000486319 SLC27A6Q9Y2P4 619 aa14.53□□□□□ -0.08
POLR2J3-204ENST00000486319 ANTXRLA6NF34 631 aa14.52□□□□□ -0.08
POLR2J3-204ENST00000486319 CAPN8A6NHC0 703 aa14.52□□□□□ -0.08
POLR2J3-204ENST00000486319 WASH3PC4AMC7 463 aa14.52□□□□□ -0.08
POLR2J3-204ENST00000486319 GFRA3O60609 400 aa14.52□□□□□ -0.08
POLR2J3-204ENST00000486319 SNNO75324 88 aaPredicted RBP14.52□□□□□ -0.08
POLR2J3-204ENST00000486319 NDUFS3O75489 264 aa14.52□□□□□ -0.08
POLR2J3-204ENST00000486319 ALPIP09923 528 aa14.52□□□□□ -0.08
POLR2J3-204ENST00000486319 CISD3P0C7P0 127 aa14.52□□□□□ -0.08
POLR2J3-204ENST00000486319 HOXD11P31277 338 aaPredicted RBP14.52□□□□□ -0.08
POLR2J3-204ENST00000486319 KIR2DL1P43626 348 aaPredicted RBP14.52□□□□□ -0.08
POLR2J3-204ENST00000486319 FNTBP49356 437 aa14.52□□□□□ -0.08
POLR2J3-204ENST00000486319 TTPAP49638 278 aa14.52□□□□□ -0.08
POLR2J3-204ENST00000486319 PRKAA2P54646 552 aa14.52□□□□□ -0.08
POLR2J3-204ENST00000486319 DMWDQ09019 674 aa14.52□□□□□ -0.08
POLR2J3-204ENST00000486319 SF3A3Q12874 501 aaKnown RBP eCLIP14.52□□□□□ -0.08
POLR2J3-204ENST00000486319 SEMA3AQ14563 771 aa14.52□□□□□ -0.08
POLR2J3-204ENST00000486319 TMEM215Q68D42 235 aa14.52□□□□□ -0.08
POLR2J3-204ENST00000486319 DPY19L3Q6ZPD9 716 aa14.52□□□□□ -0.08
POLR2J3-204ENST00000486319 CCDC121Q6ZUS5 278 aa14.52□□□□□ -0.08
POLR2J3-204ENST00000486319 LYSMD3Q7Z3D4 306 aa14.52□□□□□ -0.08
POLR2J3-204ENST00000486319 CENPLQ8N0S6 344 aaPredicted RBP14.52□□□□□ -0.08
POLR2J3-204ENST00000486319 KCTD4Q8WVF5 259 aa14.52□□□□□ -0.08
POLR2J3-204ENST00000486319 LYSMD1Q96S90 227 aa14.52□□□□□ -0.08
POLR2J3-204ENST00000486319 TRIM55Q9BYV6 548 aa14.52□□□□□ -0.08
POLR2J3-204ENST00000486319 ZFYVE1Q9HBF4 777 aa14.52□□□□□ -0.08
POLR2J3-204ENST00000486319 POPDC3Q9HBV1 291 aa14.52□□□□□ -0.08
POLR2J3-204ENST00000486319 GPAMQ9HCL2 828 aa14.52□□□□□ -0.08
POLR2J3-204ENST00000486319 CRYL1Q9Y2S2 319 aa14.52□□□□□ -0.08
POLR2J3-204ENST00000486319 PPIL1Q9Y3C6 166 aa14.52□□□□□ -0.08
POLR2J3-204ENST00000486319 USH1CQ9Y6N9 552 aa14.52□□□□□ -0.08
POLR2J3-204ENST00000486319 C1orf232A0A0U1RR37 186 aa14.51□□□□□ -0.09
POLR2J3-204ENST00000486319 CCT8L1PA6NM43 557 aa14.51□□□□□ -0.09
POLR2J3-204ENST00000486319 BNIP3LO60238 219 aa14.51□□□□□ -0.09
POLR2J3-204ENST00000486319 LILRB5O75023 590 aa14.51□□□□□ -0.09
POLR2J3-204ENST00000486319 H2AFYO75367 372 aaKnown RBP14.51□□□□□ -0.09
POLR2J3-204ENST00000486319 LMNAP02545 664 aaKnown RBP14.51□□□□□ -0.09
POLR2J3-204ENST00000486319 SERPINE1P05121 402 aa14.51□□□□□ -0.09
POLR2J3-204ENST00000486319 MYL2P10916 166 aa14.51□□□□□ -0.09
POLR2J3-204ENST00000486319 RALBP11234 206 aa14.51□□□□□ -0.09
POLR2J3-204ENST00000486319 FGF3P11487 239 aaPredicted RBP14.51□□□□□ -0.09
POLR2J3-204ENST00000486319 HNF1BP35680 557 aa14.51□□□□□ -0.09
POLR2J3-204ENST00000486319 GMPRP36959 345 aa14.51□□□□□ -0.09
POLR2J3-204ENST00000486319 PXNP49023 591 aaPredicted RBP14.51□□□□□ -0.09
POLR2J3-204ENST00000486319 POLR2LP62875 67 aaKnown RBP14.51□□□□□ -0.09
POLR2J3-204ENST00000486319 OCRLQ01968 901 aa14.51□□□□□ -0.09
POLR2J3-204ENST00000486319 ZNF460Q14592 562 aa14.51□□□□□ -0.09
POLR2J3-204ENST00000486319 FAM83EQ2M2I3 478 aa14.51□□□□□ -0.09
POLR2J3-204ENST00000486319 HSF5Q4G112 596 aaPredicted RBP14.51□□□□□ -0.09
POLR2J3-204ENST00000486319 AGAP9Q5VTM2 703 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms