RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 OSBPL2Q9H1P3 480 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 TNKS2Q9H2K2 1166 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 CCSER2Q9H7U1 834 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 MIEF1Q9NQG6 463 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 EURLQ9NYK6 297 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 MEIS3P2A8K0S8 358 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 ASNA1O43681 348 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 COL6A2P12110 1019 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 ALDH9A1P49189 494 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 PSME3P61289 254 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 CNTN1Q12860 1018 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 ZNF460Q14592 562 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 STYXQ8WUJ0 223 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 RCN3Q96D15 328 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 MAGEB10Q96LZ2 347 aaPredicted RBP10.99□□□□□ -0.65
HDAC6-228ENST00000486227 HPS4Q9NQG7 708 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 CLDND1Q9NY35 253 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 TRAF6Q9Y4K3 522 aa10.99□□□□□ -0.65
HDAC6-228ENST00000486227 TBC1D3DA0A087WVF3 549 aa10.98□□□□□ -0.65
HDAC6-228ENST00000486227 TBC1D3IA0A087WXS9 549 aa10.98□□□□□ -0.65
HDAC6-228ENST00000486227 TBC1D3EA0A087X179 549 aa10.98□□□□□ -0.65
HDAC6-228ENST00000486227 TBC1D3KA0A087X1G2 549 aa10.98□□□□□ -0.65
HDAC6-228ENST00000486227 DYTNA2CJ06 578 aa10.98□□□□□ -0.65
HDAC6-228ENST00000486227 TBC1D3FA6NER0 549 aaPredicted RBP10.98□□□□□ -0.65
HDAC6-228ENST00000486227 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.98□□□□□ -0.65
HDAC6-228ENST00000486227 TBC1D3LB9A6J9 549 aa10.98□□□□□ -0.65
HDAC6-228ENST00000486227 TRAFD1O14545 582 aaPredicted RBP10.98□□□□□ -0.65
HDAC6-228ENST00000486227 TBC1D3HP0C7X1 549 aa10.98□□□□□ -0.65
HDAC6-228ENST00000486227 AMD1P17707 334 aa10.98□□□□□ -0.65
HDAC6-228ENST00000486227 PROZP22891 400 aa10.98□□□□□ -0.65
HDAC6-228ENST00000486227 PIK3R1P27986 724 aa10.98□□□□□ -0.65
HDAC6-228ENST00000486227 S100A3P33764 101 aa10.98□□□□□ -0.65
HDAC6-228ENST00000486227 HK2P52789 917 aa10.98□□□□□ -0.65
HDAC6-228ENST00000486227 MLLT6P55198 1093 aaPredicted RBP10.98□□□□□ -0.65
HDAC6-228ENST00000486227 TAS2R39P59534 338 aa10.98□□□□□ -0.65
HDAC6-228ENST00000486227 GPX6P59796 221 aa10.98□□□□□ -0.65
HDAC6-228ENST00000486227 TRIM32Q13049 653 aa10.98□□□□□ -0.65
HDAC6-228ENST00000486227 KLF10Q13118 480 aa10.98□□□□□ -0.65
HDAC6-228ENST00000486227 KLF1Q13351 362 aaPredicted RBP10.98□□□□□ -0.65
HDAC6-228ENST00000486227 KCNJ11Q14654 390 aa10.98□□□□□ -0.65
HDAC6-228ENST00000486227 ARL13AQ5H913 290 aaPredicted RBP10.98□□□□□ -0.65
HDAC6-228ENST00000486227 VWA5B1Q5TIE3 1220 aa10.98□□□□□ -0.65
HDAC6-228ENST00000486227 TPGS2Q68CL5 300 aa10.98□□□□□ -0.65
HDAC6-228ENST00000486227 TBC1D3GQ6DHY5 549 aa10.98□□□□□ -0.65
HDAC6-228ENST00000486227 TBC1D3CQ6IPX1 549 aa10.98□□□□□ -0.65
HDAC6-228ENST00000486227 TMC5Q6UXY8 1006 aa10.98□□□□□ -0.65
HDAC6-228ENST00000486227 GPRIN3Q6ZVF9 776 aa10.98□□□□□ -0.65
HDAC6-228ENST00000486227 CUZD1Q86UP6 607 aa10.98□□□□□ -0.65
HDAC6-228ENST00000486227 ZNF280BQ86YH2 543 aa10.98□□□□□ -0.65
HDAC6-228ENST00000486227 TBC1D3Q8IZP1 549 aaPredicted RBP10.98□□□□□ -0.65
HDAC6-228ENST00000486227 GATA5Q9BWX5 397 aaPredicted RBP10.98□□□□□ -0.65
HDAC6-228ENST00000486227 OSBPL6Q9BZF3 934 aa10.98□□□□□ -0.65
HDAC6-228ENST00000486227 NDOR1Q9UHB4 597 aa10.98□□□□□ -0.65
HDAC6-228ENST00000486227 SIPA1L3O60292 1781 aaPredicted RBP10.98□□□□□ -0.65
HDAC6-228ENST00000486227 INSIG1O15503 277 aa10.98□□□□□ -0.65
HDAC6-228ENST00000486227 SIN3BO75182 1162 aa10.98□□□□□ -0.65
HDAC6-228ENST00000486227 ULK1O75385 1050 aa10.98□□□□□ -0.65
HDAC6-228ENST00000486227 EDN1P05305 212 aa10.98□□□□□ -0.65
HDAC6-228ENST00000486227 GSNP06396 782 aa10.98□□□□□ -0.65
HDAC6-228ENST00000486227 LINC00032P0C843 101 aa10.98□□□□□ -0.65
HDAC6-228ENST00000486227 GNAZP19086 355 aa10.98□□□□□ -0.65
HDAC6-228ENST00000486227 NAA20P61599 178 aa10.98□□□□□ -0.65
HDAC6-228ENST00000486227 VAC14Q08AM6 782 aa10.98□□□□□ -0.65
HDAC6-228ENST00000486227 SLC10A7Q0GE19 358 aa10.98□□□□□ -0.65
HDAC6-228ENST00000486227 OLIG2Q13516 323 aa10.98□□□□□ -0.65
HDAC6-228ENST00000486227 FBXO48Q5FWF7 155 aa10.98□□□□□ -0.65
HDAC6-228ENST00000486227 OTUD3Q5T2D3 398 aaPredicted RBP10.98□□□□□ -0.65
HDAC6-228ENST00000486227 PXYLP1Q8TE99 480 aa10.98□□□□□ -0.65
HDAC6-228ENST00000486227 FCRL5Q96RD9 977 aa10.98□□□□□ -0.65
HDAC6-228ENST00000486227 FCF1Q9Y324 198 aaKnown RBP10.98□□□□□ -0.65
HDAC6-228ENST00000486227 ASB3Q9Y575 518 aa10.98□□□□□ -0.65
HDAC6-228ENST00000486227 BEST1O76090 585 aa10.98□□□□□ -0.65
HDAC6-228ENST00000486227 IPO13O94829 963 aaKnown RBP10.98□□□□□ -0.65
HDAC6-228ENST00000486227 F7P08709 466 aaPredicted RBP10.98□□□□□ -0.65
HDAC6-228ENST00000486227 SLC11A1P49279 550 aa10.98□□□□□ -0.65
HDAC6-228ENST00000486227 CPSF6Q16630 551 aaKnown RBP eCLIP10.98□□□□□ -0.65
HDAC6-228ENST00000486227 TRAF7Q6Q0C0 670 aa10.98□□□□□ -0.65
HDAC6-228ENST00000486227 ABRAXAS1Q6UWZ7 409 aa10.98□□□□□ -0.65
HDAC6-228ENST00000486227 KIAA0408Q6ZU52 694 aa10.98□□□□□ -0.65
HDAC6-228ENST00000486227 AMIGO2Q86SJ2 522 aa10.98□□□□□ -0.65
HDAC6-228ENST00000486227 P3H2Q8IVL5 708 aa10.98□□□□□ -0.65
HDAC6-228ENST00000486227 GPR21Q99679 349 aa10.98□□□□□ -0.65
HDAC6-228ENST00000486227 TBCDQ9BTW9 1192 aa10.98□□□□□ -0.65
HDAC6-228ENST00000486227 R3HDMLQ9H3Y0 253 aa10.98□□□□□ -0.65
HDAC6-228ENST00000486227 DUS2Q9NX74 493 aaKnown RBP10.98□□□□□ -0.65
HDAC6-228ENST00000486227 SLX4Q8IY92 1834 aa10.98□□□□□ -0.65
HDAC6-228ENST00000486227 STRCQ7RTU9 1775 aa10.97□□□□□ -0.65
HDAC6-228ENST00000486227 EIF2S1P05198 315 aaKnown RBP10.97□□□□□ -0.65
HDAC6-228ENST00000486227 HLA-DQB2P05538 268 aa10.97□□□□□ -0.65
HDAC6-228ENST00000486227 KELP23276 732 aa10.97□□□□□ -0.65
HDAC6-228ENST00000486227 RFX3P48380 749 aa10.97□□□□□ -0.65
HDAC6-228ENST00000486227 CXCR3P49682 368 aa10.97□□□□□ -0.65
HDAC6-228ENST00000486227 KCNQ1P51787 676 aa10.97□□□□□ -0.65
HDAC6-228ENST00000486227 ABRQ12979 859 aa10.97□□□□□ -0.65
HDAC6-228ENST00000486227 SQLEQ14534 574 aa10.97□□□□□ -0.65
HDAC6-228ENST00000486227 METTL21CQ5VZV1 264 aa10.97□□□□□ -0.65
HDAC6-228ENST00000486227 CXorf40BQ96DE9 158 aa10.97□□□□□ -0.65
HDAC6-228ENST00000486227 RPL10LQ96L21 214 aaKnown RBP10.97□□□□□ -0.65
HDAC6-228ENST00000486227 RNF145Q96MT1 663 aa10.97□□□□□ -0.65
HDAC6-228ENST00000486227 PAAF1Q9BRP4 392 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms