RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 COL27A1Q8IZC6 1860 aaPredicted RBP12.86□□□□□ -0.35
SSR4-211ENST00000486204 KNTC1P50748 2209 aa12.85□□□□□ -0.35
SSR4-211ENST00000486204 COL6A6A6NMZ7 2263 aa12.85□□□□□ -0.35
SSR4-211ENST00000486204 DFNA5O60443 496 aa12.85□□□□□ -0.35
SSR4-211ENST00000486204 USP12O75317 370 aa12.85□□□□□ -0.35
SSR4-211ENST00000486204 AP2A1O95782 977 aa12.85□□□□□ -0.35
SSR4-211ENST00000486204 IFNB1P01574 187 aa12.85□□□□□ -0.35
SSR4-211ENST00000486204 TSHRP16473 764 aa12.85□□□□□ -0.35
SSR4-211ENST00000486204 TEAD1P28347 426 aa12.85□□□□□ -0.35
SSR4-211ENST00000486204 EPHA8P29322 1005 aaPredicted RBP12.85□□□□□ -0.35
SSR4-211ENST00000486204 RPL22P35268 128 aaKnown RBP12.85□□□□□ -0.35
SSR4-211ENST00000486204 UCNP55089 124 aa12.85□□□□□ -0.35
SSR4-211ENST00000486204 KIAA1024LP59773 190 aa12.85□□□□□ -0.35
SSR4-211ENST00000486204 SPARCL1Q14515 664 aa12.85□□□□□ -0.35
SSR4-211ENST00000486204 PRPSAP1Q14558 356 aa12.85□□□□□ -0.35
SSR4-211ENST00000486204 NFATC4Q14934 902 aa12.85□□□□□ -0.35
SSR4-211ENST00000486204 HENMT1Q5T8I9 393 aaKnown RBP12.85□□□□□ -0.35
SSR4-211ENST00000486204 KCTD16Q68DU8 428 aa12.85□□□□□ -0.35
SSR4-211ENST00000486204 MACC1Q6ZN28 852 aa12.85□□□□□ -0.35
SSR4-211ENST00000486204 PRICKLE2Q7Z3G6 844 aa12.85□□□□□ -0.35
SSR4-211ENST00000486204 CREG2Q8IUH2 290 aa12.85□□□□□ -0.35
SSR4-211ENST00000486204 NRSN1Q8IZ57 195 aa12.85□□□□□ -0.35
SSR4-211ENST00000486204 OXR1Q8N573 874 aa12.85□□□□□ -0.35
SSR4-211ENST00000486204 TAB3Q8N5C8 712 aaPredicted RBP12.85□□□□□ -0.35
SSR4-211ENST00000486204 ZNF248Q8NDW4 579 aa12.85□□□□□ -0.35
SSR4-211ENST00000486204 TTC9Q92623 222 aa12.85□□□□□ -0.35
SSR4-211ENST00000486204 SCAMP4Q969E2 229 aa12.85□□□□□ -0.35
SSR4-211ENST00000486204 AGAP2Q99490 1192 aa12.85□□□□□ -0.35
SSR4-211ENST00000486204 TBL1YQ9BQ87 522 aa12.85□□□□□ -0.35
SSR4-211ENST00000486204 LGR4Q9BXB1 951 aa12.85□□□□□ -0.35
SSR4-211ENST00000486204 TEX101Q9BY14 249 aa12.85□□□□□ -0.35
SSR4-211ENST00000486204 ZFYVE1Q9HBF4 777 aa12.85□□□□□ -0.35
SSR4-211ENST00000486204 ETNK1Q9HBU6 452 aa12.85□□□□□ -0.35
SSR4-211ENST00000486204 HOMER3Q9NSC5 361 aa12.85□□□□□ -0.35
SSR4-211ENST00000486204 KLF15Q9UIH9 416 aa12.85□□□□□ -0.35
SSR4-211ENST00000486204 OR1A2Q9Y585 309 aa12.85□□□□□ -0.35
SSR4-211ENST00000486204 SPTA1P02549 2419 aa12.85□□□□□ -0.35
SSR4-211ENST00000486204 COL12A1Q99715 3063 aa12.84□□□□□ -0.35
SSR4-211ENST00000486204 CTAGE9A4FU28 777 aa12.84□□□□□ -0.35
SSR4-211ENST00000486204 PHF2O75151 1096 aa12.84□□□□□ -0.35
SSR4-211ENST00000486204 HOXC4P09017 264 aaPredicted RBP12.84□□□□□ -0.35
SSR4-211ENST00000486204 NME1P15531 152 aaKnown RBP12.84□□□□□ -0.35
SSR4-211ENST00000486204 HMGCLP35914 325 aa12.84□□□□□ -0.35
SSR4-211ENST00000486204 THOP1P52888 689 aa12.84□□□□□ -0.35
SSR4-211ENST00000486204 DCDC1P59894 354 aa12.84□□□□□ -0.35
SSR4-211ENST00000486204 ETF1P62495 437 aaKnown RBP12.84□□□□□ -0.35
SSR4-211ENST00000486204 BNIP3Q12983 259 aa12.84□□□□□ -0.35
SSR4-211ENST00000486204 SEMA5AQ13591 1074 aa12.84□□□□□ -0.35
SSR4-211ENST00000486204 ZNF542PQ5EBM4 170 aa12.84□□□□□ -0.35
SSR4-211ENST00000486204 CCDC70Q6NSX1 233 aa12.84□□□□□ -0.35
SSR4-211ENST00000486204 NLRP8Q86W28 1048 aa12.84□□□□□ -0.35
SSR4-211ENST00000486204 PARGQ86W56 976 aa12.84□□□□□ -0.35
SSR4-211ENST00000486204 GATAD2AQ86YP4 633 aa12.84□□□□□ -0.35
SSR4-211ENST00000486204 GPR26Q8NDV2 337 aa12.84□□□□□ -0.35
SSR4-211ENST00000486204 SAP25Q8TEE9 199 aa12.84□□□□□ -0.35
SSR4-211ENST00000486204 AP2M1Q96CW1 435 aa12.84□□□□□ -0.35
SSR4-211ENST00000486204 SRPK1Q96SB4 655 aaKnown RBP12.84□□□□□ -0.35
SSR4-211ENST00000486204 NAP1L3Q99457 506 aaPredicted RBP12.84□□□□□ -0.35
SSR4-211ENST00000486204 RIOK2Q9BVS4 552 aaKnown RBP12.84□□□□□ -0.35
SSR4-211ENST00000486204 LRRC40Q9H9A6 602 aa12.84□□□□□ -0.35
SSR4-211ENST00000486204 PKD2L2Q9NZM6 624 aa12.84□□□□□ -0.35
SSR4-211ENST00000486204 HACD3Q9P035 362 aa12.84□□□□□ -0.35
SSR4-211ENST00000486204 IL17CQ9P0M4 197 aa12.84□□□□□ -0.35
SSR4-211ENST00000486204 PAK5Q9P286 719 aa12.84□□□□□ -0.35
SSR4-211ENST00000486204 NEU2Q9Y3R4 380 aa12.84□□□□□ -0.35
SSR4-211ENST00000486204 SAR1BQ9Y6B6 198 aa12.84□□□□□ -0.35
SSR4-211ENST00000486204 RP1P56715 2156 aa12.84□□□□□ -0.35
SSR4-211ENST00000486204 RGSL1A5PLK6 1076 aa12.83□□□□□ -0.36
SSR4-211ENST00000486204 TMEM202A6NGA9 273 aa12.83□□□□□ -0.36
SSR4-211ENST00000486204 ERI2A8K979 691 aaKnown RBP12.83□□□□□ -0.36
SSR4-211ENST00000486204 FADS2P1A8MWK0 482 aa12.83□□□□□ -0.36
SSR4-211ENST00000486204 YKT6O15498 198 aa12.83□□□□□ -0.36
SSR4-211ENST00000486204 SUN1O94901 812 aa12.83□□□□□ -0.36
SSR4-211ENST00000486204 SLC4A1P02730 911 aa12.83□□□□□ -0.36
SSR4-211ENST00000486204 CSF2P04141 144 aa12.83□□□□□ -0.36
SSR4-211ENST00000486204 GIMD1P0DJR0 217 aa12.83□□□□□ -0.36
SSR4-211ENST00000486204 MYCLP1P12525 358 aaPredicted RBP12.83□□□□□ -0.36
SSR4-211ENST00000486204 BPIP17213 487 aa12.83□□□□□ -0.36
SSR4-211ENST00000486204 FDFT1P37268 417 aa12.83□□□□□ -0.36
SSR4-211ENST00000486204 COILP38432 576 aaPredicted RBP12.83□□□□□ -0.36
SSR4-211ENST00000486204 ARRB1P49407 418 aaPredicted RBP12.83□□□□□ -0.36
SSR4-211ENST00000486204 ACADVLP49748 655 aa12.83□□□□□ -0.36
SSR4-211ENST00000486204 CDK3Q00526 305 aa12.83□□□□□ -0.36
SSR4-211ENST00000486204 PTK2BQ14289 1009 aa12.83□□□□□ -0.36
SSR4-211ENST00000486204 ALG11Q2TAA5 492 aa12.83□□□□□ -0.36
SSR4-211ENST00000486204 RAET1GQ6H3X3 334 aa12.83□□□□□ -0.36
SSR4-211ENST00000486204 CCDC137Q6PK04 289 aaKnown RBP12.83□□□□□ -0.36
SSR4-211ENST00000486204 ADAMTSL4Q6UY14 1074 aa12.83□□□□□ -0.36
SSR4-211ENST00000486204 HEATR4Q86WZ0 1026 aa12.83□□□□□ -0.36
SSR4-211ENST00000486204 RBFAQ8N0V3 343 aa12.83□□□□□ -0.36
SSR4-211ENST00000486204 CCDC89Q8N998 374 aa12.83□□□□□ -0.36
SSR4-211ENST00000486204 CCHCR1Q8TD31 782 aa12.83□□□□□ -0.36
SSR4-211ENST00000486204 BLOC1S5Q8TDH9 187 aa12.83□□□□□ -0.36
SSR4-211ENST00000486204 MAGOHBQ96A72 148 aaKnown RBP12.83□□□□□ -0.36
SSR4-211ENST00000486204 PDXPQ96GD0 296 aa12.83□□□□□ -0.36
SSR4-211ENST00000486204 CAPZA3Q96KX2 299 aa12.83□□□□□ -0.36
SSR4-211ENST00000486204 WDR92Q96MX6 357 aa12.83□□□□□ -0.36
SSR4-211ENST00000486204 GPR63Q9BZJ6 419 aa12.83□□□□□ -0.36
SSR4-211ENST00000486204 TCEAL2Q9H3H9 227 aaPredicted RBP12.83□□□□□ -0.36
SSR4-211ENST00000486204 TRABDQ9H4I3 376 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms