RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 C14orf28Q4W4Y0 310 aa6.96□□□□□ -1.3
VPS50-218ENST00000485994 CCDC157Q569K6 752 aa6.96□□□□□ -1.3
VPS50-218ENST00000485994 PERM1Q5SV97 790 aa6.96□□□□□ -1.3
VPS50-218ENST00000485994 CERCAMQ5T4B2 595 aa6.96□□□□□ -1.3
VPS50-218ENST00000485994 ZDHHC20Q5W0Z9 365 aa6.96□□□□□ -1.3
VPS50-218ENST00000485994 KCTD16Q68DU8 428 aa6.96□□□□□ -1.3
VPS50-218ENST00000485994 RAET1GQ6H3X3 334 aa6.96□□□□□ -1.3
VPS50-218ENST00000485994 CCDC70Q6NSX1 233 aa6.96□□□□□ -1.3
VPS50-218ENST00000485994 RAD9BQ6WBX8 426 aa6.96□□□□□ -1.3
VPS50-218ENST00000485994 RBM44Q6ZP01 1051 aaKnown RBP6.96□□□□□ -1.3
VPS50-218ENST00000485994 PID1Q7Z2X4 250 aa6.96□□□□□ -1.3
VPS50-218ENST00000485994 EFL1Q7Z2Z2 1120 aaKnown RBP6.96□□□□□ -1.3
VPS50-218ENST00000485994 RD3Q7Z3Z2 195 aa6.96□□□□□ -1.3
VPS50-218ENST00000485994 ZNF438Q7Z4V0 828 aa6.96□□□□□ -1.3
VPS50-218ENST00000485994 TAF8Q7Z7C8 310 aa6.96□□□□□ -1.3
VPS50-218ENST00000485994 MARCH9Q86YJ5 346 aa6.96□□□□□ -1.3
VPS50-218ENST00000485994 KLHDC8BQ8IXV7 354 aa6.96□□□□□ -1.3
VPS50-218ENST00000485994 SYCE1Q8N0S2 351 aa6.96□□□□□ -1.3
VPS50-218ENST00000485994 FAM46DQ8NEK8 389 aa6.96□□□□□ -1.3
VPS50-218ENST00000485994 SNIP1Q8TAD8 396 aaKnown RBP6.96□□□□□ -1.3
VPS50-218ENST00000485994 MDM1Q8TC05 714 aa6.96□□□□□ -1.3
VPS50-218ENST00000485994 HTR3CQ8WXA8 447 aa6.96□□□□□ -1.3
VPS50-218ENST00000485994 SCAMP4Q969E2 229 aa6.96□□□□□ -1.3
VPS50-218ENST00000485994 TMEM159Q96B96 161 aa6.96□□□□□ -1.3
VPS50-218ENST00000485994 PDXPQ96GD0 296 aa6.96□□□□□ -1.3
VPS50-218ENST00000485994 LIN37Q96GY3 246 aaPredicted RBP6.96□□□□□ -1.3
VPS50-218ENST00000485994 PRR11Q96HE9 360 aaPredicted RBP6.96□□□□□ -1.3
VPS50-218ENST00000485994 SLC46A1Q96NT5 459 aa6.96□□□□□ -1.3
VPS50-218ENST00000485994 AGAP3Q96P47 875 aa6.96□□□□□ -1.3
VPS50-218ENST00000485994 PLEKHG4BQ96PX9 1271 aa6.96□□□□□ -1.3
VPS50-218ENST00000485994 BAG1Q99933 345 aaPredicted RBP6.96□□□□□ -1.3
VPS50-218ENST00000485994 DPYSL5Q9BPU6 564 aa6.96□□□□□ -1.3
VPS50-218ENST00000485994 CCDC3Q9BQI4 270 aa6.96□□□□□ -1.3
VPS50-218ENST00000485994 FERMT1Q9BQL6 677 aa6.96□□□□□ -1.3
VPS50-218ENST00000485994 ZSCAN5AQ9BUG6 496 aa6.96□□□□□ -1.3
VPS50-218ENST00000485994 POLR1BQ9H9Y6 1135 aa6.96□□□□□ -1.3
VPS50-218ENST00000485994 MRPL40Q9NQ50 206 aaKnown RBP6.96□□□□□ -1.3
VPS50-218ENST00000485994 HACD3Q9P035 362 aa6.96□□□□□ -1.3
VPS50-218ENST00000485994 SAE1Q9UBE0 346 aaPredicted RBP6.96□□□□□ -1.3
VPS50-218ENST00000485994 SUFUQ9UMX1 484 aa6.96□□□□□ -1.3
VPS50-218ENST00000485994 HYOU1Q9Y4L1 999 aa6.96□□□□□ -1.3
VPS50-218ENST00000485994 ENTPD2Q9Y5L3 495 aa6.96□□□□□ -1.3
VPS50-218ENST00000485994 AK5Q9Y6K8 562 aa6.96□□□□□ -1.3
VPS50-218ENST00000485994 DUSP10Q9Y6W6 482 aa6.96□□□□□ -1.3
VPS50-218ENST00000485994 BPTFQ12830 3046 aa6.96□□□□□ -1.3
VPS50-218ENST00000485994 SEC16AO15027 2179 aa6.96□□□□□ -1.3
VPS50-218ENST00000485994 C1orf232A0A0U1RR37 186 aa6.95□□□□□ -1.3
VPS50-218ENST00000485994 A0A1W2PQM1 296 aa6.95□□□□□ -1.3
VPS50-218ENST00000485994 OR5K4A6NMS3 321 aa6.95□□□□□ -1.3
VPS50-218ENST00000485994 CHUKO15111 745 aa6.95□□□□□ -1.3
VPS50-218ENST00000485994 NUAK1O60285 661 aa6.95□□□□□ -1.3
VPS50-218ENST00000485994 KCNJ13O60928 360 aa6.95□□□□□ -1.3
VPS50-218ENST00000485994 USP12O75317 370 aa6.95□□□□□ -1.3
VPS50-218ENST00000485994 CSO75390 466 aaKnown RBP6.95□□□□□ -1.3
VPS50-218ENST00000485994 ANXA9O76027 345 aa6.95□□□□□ -1.3
VPS50-218ENST00000485994 TJP3O95049 919 aa6.95□□□□□ -1.3
VPS50-218ENST00000485994 MT-CYBP00156 380 aaPredicted RBP6.95□□□□□ -1.3
VPS50-218ENST00000485994 MYF5P13349 255 aa6.95□□□□□ -1.3
VPS50-218ENST00000485994 PECAM1P16284 738 aaPredicted RBP6.95□□□□□ -1.3
VPS50-218ENST00000485994 CCKBRP32239 447 aa6.95□□□□□ -1.3
VPS50-218ENST00000485994 FASLGP48023 281 aa6.95□□□□□ -1.3
VPS50-218ENST00000485994 DYNLT1P63172 113 aa6.95□□□□□ -1.3
VPS50-218ENST00000485994 B4GALNT1Q00973 533 aa6.95□□□□□ -1.3
VPS50-218ENST00000485994 CTBSQ01459 385 aa6.95□□□□□ -1.3
VPS50-218ENST00000485994 ZFP36L1Q07352 338 aaKnown RBP6.95□□□□□ -1.3
VPS50-218ENST00000485994 KIF5AQ12840 1032 aa6.95□□□□□ -1.3
VPS50-218ENST00000485994 NOMO1Q15155 1222 aa6.95□□□□□ -1.3
VPS50-218ENST00000485994 TBC1D25Q3MII6 688 aa6.95□□□□□ -1.3
VPS50-218ENST00000485994 KAZNQ674X7 775 aa6.95□□□□□ -1.3
VPS50-218ENST00000485994 DENND2CQ68D51 928 aa6.95□□□□□ -1.3
VPS50-218ENST00000485994 KDELC1Q6UW63 502 aa6.95□□□□□ -1.3
VPS50-218ENST00000485994 RANBP10Q6VN20 620 aa6.95□□□□□ -1.3
VPS50-218ENST00000485994 ZNF662Q6ZS27 426 aa6.95□□□□□ -1.3
VPS50-218ENST00000485994 RFLNAQ6ZTI6 216 aa6.95□□□□□ -1.3
VPS50-218ENST00000485994 NAGSQ8N159 534 aa6.95□□□□□ -1.3
VPS50-218ENST00000485994 ZNF567Q8N184 647 aa6.95□□□□□ -1.3
VPS50-218ENST00000485994 TRAM1L1Q8N609 369 aa6.95□□□□□ -1.3
VPS50-218ENST00000485994 GPR26Q8NDV2 337 aa6.95□□□□□ -1.3
VPS50-218ENST00000485994 LPCAT1Q8NF37 534 aa6.95□□□□□ -1.3
VPS50-218ENST00000485994 CCL4L1Q8NHW4 92 aa6.95□□□□□ -1.3
VPS50-218ENST00000485994 WDR36Q8NI36 951 aaKnown RBP6.95□□□□□ -1.3
VPS50-218ENST00000485994 LRRN4Q8WUT4 740 aa6.95□□□□□ -1.3
VPS50-218ENST00000485994 KRT35Q92764 455 aa6.95□□□□□ -1.3
VPS50-218ENST00000485994 HAUS1Q96CS2 278 aa6.95□□□□□ -1.3
VPS50-218ENST00000485994 TMEM74Q96NL1 305 aa6.95□□□□□ -1.3
VPS50-218ENST00000485994 PPP1R2P1Q96PQ5 205 aa6.95□□□□□ -1.3
VPS50-218ENST00000485994 QKIQ96PU8 341 aaKnown RBP eCLIP6.95□□□□□ -1.3
VPS50-218ENST00000485994 VPS35Q96QK1 796 aa6.95□□□□□ -1.3
VPS50-218ENST00000485994 SMIM14Q96QK8 99 aa6.95□□□□□ -1.3
VPS50-218ENST00000485994 GFM1Q96RP9 751 aaKnown RBP6.95□□□□□ -1.3
VPS50-218ENST00000485994 AGAP2Q99490 1192 aa6.95□□□□□ -1.3
VPS50-218ENST00000485994 RIOK2Q9BVS4 552 aaKnown RBP6.95□□□□□ -1.3
VPS50-218ENST00000485994 OSBPL8Q9BZF1 889 aa6.95□□□□□ -1.3
VPS50-218ENST00000485994 CARD9Q9H257 536 aa6.95□□□□□ -1.3
VPS50-218ENST00000485994 LRRN3Q9H3W5 708 aa6.95□□□□□ -1.3
VPS50-218ENST00000485994 DPEP2Q9H4A9 486 aa6.95□□□□□ -1.3
VPS50-218ENST00000485994 CARS2Q9HA77 564 aaKnown RBP6.95□□□□□ -1.3
VPS50-218ENST00000485994 ARNT2Q9HBZ2 717 aa6.95□□□□□ -1.3
VPS50-218ENST00000485994 TRIM39Q9HCM9 518 aa6.95□□□□□ -1.3
VPS50-218ENST00000485994 SPATS2LQ9NUQ6 558 aaKnown RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms