RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 PEMTQ9UBM1 199 aa4.67□□□□□ -1.66
SMARCC1-207ENST00000485833 CNOT7Q9UIV1 285 aaKnown RBP4.67□□□□□ -1.66
SMARCC1-207ENST00000485833 TRIM17Q9Y577 477 aa4.67□□□□□ -1.66
SMARCC1-207ENST00000485833 CDH23Q9H251 3354 aa4.67□□□□□ -1.66
SMARCC1-207ENST00000485833 RTL9Q8NET4 1388 aa4.66□□□□□ -1.66
SMARCC1-207ENST00000485833 A0A087WYN8 130 aa4.66□□□□□ -1.66
SMARCC1-207ENST00000485833 GOLGA6L10A0A0M3HER8 536 aa4.66□□□□□ -1.66
SMARCC1-207ENST00000485833 hDV102S1A0JD36 115 aa4.66□□□□□ -1.66
SMARCC1-207ENST00000485833 MTA2O94776 668 aa4.66□□□□□ -1.66
SMARCC1-207ENST00000485833 ITGAXP20702 1163 aa4.66□□□□□ -1.66
SMARCC1-207ENST00000485833 CCR5P51681 352 aa4.66□□□□□ -1.66
SMARCC1-207ENST00000485833 CLDN2P57739 230 aa4.66□□□□□ -1.66
SMARCC1-207ENST00000485833 CHRNDQ07001 517 aa4.66□□□□□ -1.66
SMARCC1-207ENST00000485833 ILF3Q12906 894 aaKnown RBP eCLIP4.66□□□□□ -1.66
SMARCC1-207ENST00000485833 ZRSR1Q15695 479 aaKnown RBP4.66□□□□□ -1.66
SMARCC1-207ENST00000485833 SERTAD4-AS1Q5TG53 156 aa4.66□□□□□ -1.66
SMARCC1-207ENST00000485833 ANKRD18AQ8IVF6 992 aa4.66□□□□□ -1.66
SMARCC1-207ENST00000485833 CPOQ8IVL8 374 aa4.66□□□□□ -1.66
SMARCC1-207ENST00000485833 KIAA2013Q8IYS2 634 aa4.66□□□□□ -1.66
SMARCC1-207ENST00000485833 ANKRD42Q8N9B4 389 aa4.66□□□□□ -1.66
SMARCC1-207ENST00000485833 WFIKKN2Q8TEU8 576 aa4.66□□□□□ -1.66
SMARCC1-207ENST00000485833 ELP4Q96EB1 424 aa4.66□□□□□ -1.66
SMARCC1-207ENST00000485833 ZNF385AQ96PM9 386 aaKnown RBP4.66□□□□□ -1.66
SMARCC1-207ENST00000485833 SNTG1Q9NSN8 517 aa4.66□□□□□ -1.66
SMARCC1-207ENST00000485833 BABAM1Q9NWV8 329 aa4.66□□□□□ -1.66
SMARCC1-207ENST00000485833 GGA3Q9NZ52 723 aa4.66□□□□□ -1.66
SMARCC1-207ENST00000485833 IL1RAPL1Q9NZN1 696 aa4.66□□□□□ -1.66
SMARCC1-207ENST00000485833 KIAA1456Q9P272 454 aa4.66□□□□□ -1.66
SMARCC1-207ENST00000485833 SLCO3A1Q9UIG8 710 aa4.66□□□□□ -1.66
SMARCC1-207ENST00000485833 NIP7Q9Y221 180 aaKnown RBP eCLIP4.66□□□□□ -1.66
SMARCC1-207ENST00000485833 USP16Q9Y5T5 823 aa4.66□□□□□ -1.66
SMARCC1-207ENST00000485833 ZNF646O15015 1829 aaPredicted RBP4.66□□□□□ -1.66
SMARCC1-207ENST00000485833 LRRC37AA6NMS7 1700 aa4.66□□□□□ -1.66
SMARCC1-207ENST00000485833 LAMB1P07942 1786 aa4.65□□□□□ -1.66
SMARCC1-207ENST00000485833 PSMD14O00487 310 aa4.65□□□□□ -1.67
SMARCC1-207ENST00000485833 GUCY1B2O75343 617 aa4.65□□□□□ -1.67
SMARCC1-207ENST00000485833 STARD3NLO95772 234 aa4.65□□□□□ -1.67
SMARCC1-207ENST00000485833 F7P08709 466 aaPredicted RBP4.65□□□□□ -1.67
SMARCC1-207ENST00000485833 HMOX1P09601 288 aa4.65□□□□□ -1.67
SMARCC1-207ENST00000485833 GPTP24298 496 aa4.65□□□□□ -1.67
SMARCC1-207ENST00000485833 PSMC2P35998 433 aaKnown RBP4.65□□□□□ -1.67
SMARCC1-207ENST00000485833 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.65□□□□□ -1.67
SMARCC1-207ENST00000485833 MTHFSDQ2M296 383 aaKnown RBP4.65□□□□□ -1.67
SMARCC1-207ENST00000485833 PPP6R3Q5H9R7 873 aaPredicted RBP4.65□□□□□ -1.67
SMARCC1-207ENST00000485833 LRRTM4Q86VH4 590 aa4.65□□□□□ -1.67
SMARCC1-207ENST00000485833 ZC3HC1Q86WB0 502 aaKnown RBP4.65□□□□□ -1.67
SMARCC1-207ENST00000485833 NOC3LQ8WTT2 800 aaKnown RBP4.65□□□□□ -1.67
SMARCC1-207ENST00000485833 MXRA8Q9BRK3 442 aa4.65□□□□□ -1.67
SMARCC1-207ENST00000485833 SMYD2Q9NRG4 433 aa4.65□□□□□ -1.67
SMARCC1-207ENST00000485833 CISD1Q9NZ45 108 aaKnown RBP4.65□□□□□ -1.67
SMARCC1-207ENST00000485833 SLC9A2Q9UBY0 812 aa4.65□□□□□ -1.67
SMARCC1-207ENST00000485833 HSF4Q9ULV5 492 aa4.65□□□□□ -1.67
SMARCC1-207ENST00000485833 CDC14AQ9UNH5 594 aa4.65□□□□□ -1.67
SMARCC1-207ENST00000485833 CARD8Q9Y2G2 431 aa4.65□□□□□ -1.67
SMARCC1-207ENST00000485833 UBN2Q6ZU65 1347 aa4.65□□□□□ -1.67
SMARCC1-207ENST00000485833 TEX22C9J3V5 150 aa4.64□□□□□ -1.67
SMARCC1-207ENST00000485833 EIF3FO00303 357 aaPredicted RBP4.64□□□□□ -1.67
SMARCC1-207ENST00000485833 CLGNO14967 610 aa4.64□□□□□ -1.67
SMARCC1-207ENST00000485833 KLK8O60259 260 aa4.64□□□□□ -1.67
SMARCC1-207ENST00000485833 ZIC3O60481 467 aa4.64□□□□□ -1.67
SMARCC1-207ENST00000485833 PMS2P2O95744 297 aa4.64□□□□□ -1.67
SMARCC1-207ENST00000485833 CD58P19256 250 aa4.64□□□□□ -1.67
SMARCC1-207ENST00000485833 POU1F1P28069 291 aa4.64□□□□□ -1.67
SMARCC1-207ENST00000485833 PGM1P36871 562 aa4.64□□□□□ -1.67
SMARCC1-207ENST00000485833 EFNB1P98172 346 aa4.64□□□□□ -1.67
SMARCC1-207ENST00000485833 TAF11Q15544 211 aa4.64□□□□□ -1.67
SMARCC1-207ENST00000485833 LRRC8DQ7L1W4 858 aa4.64□□□□□ -1.67
SMARCC1-207ENST00000485833 TADA2BQ86TJ2 420 aa4.64□□□□□ -1.67
SMARCC1-207ENST00000485833 GPAT4Q86UL3 456 aa4.64□□□□□ -1.67
SMARCC1-207ENST00000485833 NAGSQ8N159 534 aa4.64□□□□□ -1.67
SMARCC1-207ENST00000485833 PLD5Q8N7P1 536 aa4.64□□□□□ -1.67
SMARCC1-207ENST00000485833 CD99L2Q8TCZ2 262 aa4.64□□□□□ -1.67
SMARCC1-207ENST00000485833 NUF2Q9BZD4 464 aa4.64□□□□□ -1.67
SMARCC1-207ENST00000485833 DBNDD1Q9H9R9 158 aa4.64□□□□□ -1.67
SMARCC1-207ENST00000485833 NOX4Q9NPH5 578 aa4.64□□□□□ -1.67
SMARCC1-207ENST00000485833 SMARCAL1Q9NZC9 954 aa4.64□□□□□ -1.67
SMARCC1-207ENST00000485833 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.64□□□□□ -1.67
SMARCC1-207ENST00000485833 NFE2L3Q9Y4A8 694 aa4.64□□□□□ -1.67
SMARCC1-207ENST00000485833 ABCC4O15439 1325 aa4.64□□□□□ -1.67
SMARCC1-207ENST00000485833 OTOFQ9HC10 1997 aa4.64□□□□□ -1.67
SMARCC1-207ENST00000485833 PRAC2D3DTV9 90 aa4.63□□□□□ -1.67
SMARCC1-207ENST00000485833 KDM4BO94953 1096 aa4.63□□□□□ -1.67
SMARCC1-207ENST00000485833 HSD3B1P14060 373 aa4.63□□□□□ -1.67
SMARCC1-207ENST00000485833 EDN2P20800 178 aa4.63□□□□□ -1.67
SMARCC1-207ENST00000485833 ALDH1B1P30837 517 aa4.63□□□□□ -1.67
SMARCC1-207ENST00000485833 HNRNPH1P31943 449 aaKnown RBP4.63□□□□□ -1.67
SMARCC1-207ENST00000485833 ITGADQ13349 1161 aa4.63□□□□□ -1.67
SMARCC1-207ENST00000485833 VEPH1Q14D04 833 aa4.63□□□□□ -1.67
SMARCC1-207ENST00000485833 EFNB3Q15768 340 aa4.63□□□□□ -1.67
SMARCC1-207ENST00000485833 NFIL3Q16649 462 aa4.63□□□□□ -1.67
SMARCC1-207ENST00000485833 AMZ1Q400G9 498 aa4.63□□□□□ -1.67
SMARCC1-207ENST00000485833 ZNF766Q5HY98 468 aa4.63□□□□□ -1.67
SMARCC1-207ENST00000485833 SUSD4Q5VX71 490 aa4.63□□□□□ -1.67
SMARCC1-207ENST00000485833 LRRC8EQ6NSJ5 796 aa4.63□□□□□ -1.67
SMARCC1-207ENST00000485833 ZNF790Q6PG37 636 aa4.63□□□□□ -1.67
SMARCC1-207ENST00000485833 ZNF329Q86UD4 541 aa4.63□□□□□ -1.67
SMARCC1-207ENST00000485833 TMTC1Q8IUR5 882 aa4.63□□□□□ -1.67
SMARCC1-207ENST00000485833 SCCPDHQ8NBX0 429 aa4.63□□□□□ -1.67
SMARCC1-207ENST00000485833 C11orf65Q8NCR3 313 aa4.63□□□□□ -1.67
SMARCC1-207ENST00000485833 IL17REQ8NFR9 667 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms