RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, human

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN1-215	ENST00000485550	TAAR2	Q9P1P5	351 aa		10.53	□□□□□ -0.72
HMGN1-215	ENST00000485550	ANAPC2	Q9UJX6	822 aa		10.53	□□□□□ -0.72
HMGN1-215	ENST00000485550	CHKB	Q9Y259	395 aa		10.53	□□□□□ -0.72
HMGN1-215	ENST00000485550	CENPE	Q02224	2701 aa		10.52	□□□□□ -0.72
HMGN1-215	ENST00000485550	PSMD11	O00231	422 aa		10.52	□□□□□ -0.73
HMGN1-215	ENST00000485550	MATN3	O15232	486 aa		10.52	□□□□□ -0.73
HMGN1-215	ENST00000485550	INPP4B	O15327	924 aa		10.52	□□□□□ -0.73
HMGN1-215	ENST00000485550	NUDT21	O43809	227 aa	Known RBP	10.52	□□□□□ -0.73
HMGN1-215	ENST00000485550	FZD6	O60353	706 aa		10.52	□□□□□ -0.73
HMGN1-215	ENST00000485550	PROSC	O94903	275 aa		10.52	□□□□□ -0.73
HMGN1-215	ENST00000485550	ASMTL	O95671	621 aa		10.52	□□□□□ -0.73
HMGN1-215	ENST00000485550	PNLIP	P16233	465 aa		10.52	□□□□□ -0.73
HMGN1-215	ENST00000485550	ACTR1B	P42025	376 aa		10.52	□□□□□ -0.73
HMGN1-215	ENST00000485550	ACTR1A	P61163	376 aa		10.52	□□□□□ -0.73
HMGN1-215	ENST00000485550	PTS	Q03393	145 aa		10.52	□□□□□ -0.73
HMGN1-215	ENST00000485550	GBE1	Q04446	702 aa		10.52	□□□□□ -0.73
HMGN1-215	ENST00000485550	ZFP36L1	Q07352	338 aa	Known RBP	10.52	□□□□□ -0.73
HMGN1-215	ENST00000485550	GALNT2	Q10471	571 aa		10.52	□□□□□ -0.73
HMGN1-215	ENST00000485550	PAFAH1B3	Q15102	231 aa	Known RBP	10.52	□□□□□ -0.73
HMGN1-215	ENST00000485550	MAP9	Q49MG5	647 aa		10.52	□□□□□ -0.73
HMGN1-215	ENST00000485550	ANKRD20A8P	Q5CZ79	823 aa		10.52	□□□□□ -0.73
HMGN1-215	ENST00000485550	RALGPS1	Q5JS13	557 aa		10.52	□□□□□ -0.73
HMGN1-215	ENST00000485550	NKAIN2	Q5VXU1	208 aa		10.52	□□□□□ -0.73
HMGN1-215	ENST00000485550	LRRC49	Q8IUZ0	686 aa		10.52	□□□□□ -0.73
HMGN1-215	ENST00000485550	NDUFAF2	Q8N183	169 aa		10.52	□□□□□ -0.73
HMGN1-215	ENST00000485550	TEX26	Q8N6G2	289 aa		10.52	□□□□□ -0.73
HMGN1-215	ENST00000485550	CCNY	Q8ND76	341 aa		10.52	□□□□□ -0.73
HMGN1-215	ENST00000485550	FAM71B	Q8TC56	605 aa		10.52	□□□□□ -0.73
HMGN1-215	ENST00000485550	MCCC1	Q96RQ3	725 aa	Predicted RBP	10.52	□□□□□ -0.73
HMGN1-215	ENST00000485550	CMKLR1	Q99788	373 aa		10.52	□□□□□ -0.73
HMGN1-215	ENST00000485550	POLR1E	Q9GZS1	481 aa	Known RBP	10.52	□□□□□ -0.73
HMGN1-215	ENST00000485550	TRNAU1AP	Q9NX07	287 aa	Known RBP	10.52	□□□□□ -0.73
HMGN1-215	ENST00000485550	KCTD5	Q9NXV2	234 aa		10.52	□□□□□ -0.73
HMGN1-215	ENST00000485550	RCOR3	Q9P2K3	495 aa	Predicted RBP	10.52	□□□□□ -0.73
HMGN1-215	ENST00000485550	PPIL1	Q9Y3C6	166 aa		10.52	□□□□□ -0.73
HMGN1-215	ENST00000485550	PRKAB1	Q9Y478	270 aa		10.52	□□□□□ -0.73
HMGN1-215	ENST00000485550	DOPEY1	Q5JWR5	2465 aa		10.52	□□□□□ -0.73
HMGN1-215	ENST00000485550	HIVEP3	Q5T1R4	2406 aa		10.51	□□□□□ -0.73
HMGN1-215	ENST00000485550		A0A0J9YYE9	177 aa		10.51	□□□□□ -0.73
HMGN1-215	ENST00000485550	ENO4	A6NNW6	628 aa		10.51	□□□□□ -0.73
HMGN1-215	ENST00000485550	PPM1D	O15297	605 aa		10.51	□□□□□ -0.73
HMGN1-215	ENST00000485550	CLDN7	O95471	211 aa		10.51	□□□□□ -0.73
HMGN1-215	ENST00000485550	SOD1	P00441	154 aa		10.51	□□□□□ -0.73
HMGN1-215	ENST00000485550	TRBC1	P01850	177 aa		10.51	□□□□□ -0.73
HMGN1-215	ENST00000485550	HLA-DQB2	P05538	268 aa		10.51	□□□□□ -0.73
HMGN1-215	ENST00000485550	CCL4	P13236	92 aa		10.51	□□□□□ -0.73
HMGN1-215	ENST00000485550	CCNC	P24863	283 aa		10.51	□□□□□ -0.73
HMGN1-215	ENST00000485550	MPST	P25325	297 aa		10.51	□□□□□ -0.73
HMGN1-215	ENST00000485550	CCR10	P46092	362 aa		10.51	□□□□□ -0.73
HMGN1-215	ENST00000485550	PPM1F	P49593	454 aa	Predicted RBP	10.51	□□□□□ -0.73
HMGN1-215	ENST00000485550	NIPAL4	Q0D2K0	466 aa		10.51	□□□□□ -0.73
HMGN1-215	ENST00000485550	SLC10A2	Q12908	348 aa	Predicted RBP	10.51	□□□□□ -0.73
HMGN1-215	ENST00000485550	C16orf72	Q14CZ0	275 aa		10.51	□□□□□ -0.73
HMGN1-215	ENST00000485550	IFI16	Q16666	785 aa	Known RBP	10.51	□□□□□ -0.73
HMGN1-215	ENST00000485550	TIGD7	Q6NT04	549 aa	Predicted RBP	10.51	□□□□□ -0.73
HMGN1-215	ENST00000485550	PIM3	Q86V86	326 aa		10.51	□□□□□ -0.73
HMGN1-215	ENST00000485550	SLITRK4	Q8IW52	837 aa		10.51	□□□□□ -0.73
HMGN1-215	ENST00000485550	NAGS	Q8N159	534 aa		10.51	□□□□□ -0.73
HMGN1-215	ENST00000485550	PQLC3	Q8N755	202 aa		10.51	□□□□□ -0.73
HMGN1-215	ENST00000485550	RCBTB1	Q8NDN9	531 aa		10.51	□□□□□ -0.73
HMGN1-215	ENST00000485550	LPCAT1	Q8NF37	534 aa		10.51	□□□□□ -0.73
HMGN1-215	ENST00000485550	ARRDC2	Q8TBH0	407 aa		10.51	□□□□□ -0.73
HMGN1-215	ENST00000485550	MAML1	Q92585	1016 aa		10.51	□□□□□ -0.73
HMGN1-215	ENST00000485550	NUDT22	Q9BRQ3	303 aa		10.51	□□□□□ -0.73
HMGN1-215	ENST00000485550	RIOK2	Q9BVS4	552 aa	Known RBP	10.51	□□□□□ -0.73
HMGN1-215	ENST00000485550	XPO4	Q9C0E2	1151 aa	Known RBP	10.51	□□□□□ -0.73
HMGN1-215	ENST00000485550	PLEKHB1	Q9UF11	243 aa	Predicted RBP	10.51	□□□□□ -0.73
HMGN1-215	ENST00000485550	SLC17A4	Q9Y2C5	497 aa		10.51	□□□□□ -0.73
HMGN1-215	ENST00000485550	SHANK1	Q9Y566	2161 aa		10.5	□□□□□ -0.73
HMGN1-215	ENST00000485550	STMND1	H3BQB6	276 aa		10.5	□□□□□ -0.73
HMGN1-215	ENST00000485550	MTSS1	O43312	755 aa		10.5	□□□□□ -0.73
HMGN1-215	ENST00000485550	CPNE6	O95741	557 aa		10.5	□□□□□ -0.73
HMGN1-215	ENST00000485550	PRL	P01236	227 aa		10.5	□□□□□ -0.73
HMGN1-215	ENST00000485550	JCHAIN	P01591	159 aa		10.5	□□□□□ -0.73
HMGN1-215	ENST00000485550	ATP1A1	P05023	1023 aa	Known RBP	10.5	□□□□□ -0.73
HMGN1-215	ENST00000485550	IVL	P07476	585 aa		10.5	□□□□□ -0.73
HMGN1-215	ENST00000485550	H2AFZ	P0C0S5	128 aa		10.5	□□□□□ -0.73
HMGN1-215	ENST00000485550	LIF	P15018	202 aa		10.5	□□□□□ -0.73
HMGN1-215	ENST00000485550	CD82	P27701	267 aa		10.5	□□□□□ -0.73
HMGN1-215	ENST00000485550	CD1C	P29017	333 aa		10.5	□□□□□ -0.73
HMGN1-215	ENST00000485550	ATP1A2	P50993	1020 aa		10.5	□□□□□ -0.73
HMGN1-215	ENST00000485550	DPT	Q07507	201 aa		10.5	□□□□□ -0.73
HMGN1-215	ENST00000485550	MESD	Q14696	234 aa		10.5	□□□□□ -0.73
HMGN1-215	ENST00000485550	PDK2	Q15119	407 aa		10.5	□□□□□ -0.73
HMGN1-215	ENST00000485550	ADAMTSL4	Q6UY14	1074 aa		10.5	□□□□□ -0.73
HMGN1-215	ENST00000485550	H2AFV	Q71UI9	128 aa		10.5	□□□□□ -0.73
HMGN1-215	ENST00000485550	KDELC2	Q7Z4H8	507 aa		10.5	□□□□□ -0.73
HMGN1-215	ENST00000485550	C17orf82	Q86X59	251 aa	Predicted RBP	10.5	□□□□□ -0.73
HMGN1-215	ENST00000485550	ZNF761	Q86XN6	746 aa	Predicted RBP	10.5	□□□□□ -0.73
HMGN1-215	ENST00000485550	MAP7D3	Q8IWC1	876 aa		10.5	□□□□□ -0.73
HMGN1-215	ENST00000485550	IL22RA1	Q8N6P7	574 aa		10.5	□□□□□ -0.73
HMGN1-215	ENST00000485550	C9orf43	Q8TAL5	461 aa	Predicted RBP	10.5	□□□□□ -0.73
HMGN1-215	ENST00000485550	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	10.5	□□□□□ -0.73
HMGN1-215	ENST00000485550	RAPGEF5	Q92565	580 aa		10.5	□□□□□ -0.73
HMGN1-215	ENST00000485550	NKD1	Q969G9	470 aa		10.5	□□□□□ -0.73
HMGN1-215	ENST00000485550	PMEPA1	Q969W9	287 aa		10.5	□□□□□ -0.73
HMGN1-215	ENST00000485550	MIB2	Q96AX9	1013 aa		10.5	□□□□□ -0.73
HMGN1-215	ENST00000485550	TMEM159	Q96B96	161 aa		10.5	□□□□□ -0.73
HMGN1-215	ENST00000485550	OR2M4	Q96R27	311 aa		10.5	□□□□□ -0.73
HMGN1-215	ENST00000485550	ZNF670	Q9BS34	389 aa		10.5	□□□□□ -0.73

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