RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 ZSCAN5DPP0CG00 497 aa15.76■□□□□ 0.11
UPF3A-208ENST00000484246 CDK4P11802 303 aa15.76■□□□□ 0.11
UPF3A-208ENST00000484246 CKMT1AP12532 417 aa15.76■□□□□ 0.11
UPF3A-208ENST00000484246 CTSEP14091 401 aa15.76■□□□□ 0.11
UPF3A-208ENST00000484246 ETS1P14921 441 aa15.76■□□□□ 0.11
UPF3A-208ENST00000484246 CKMT2P17540 419 aa15.76■□□□□ 0.11
UPF3A-208ENST00000484246 ACP1P24666 158 aa15.76■□□□□ 0.11
UPF3A-208ENST00000484246 MAGEA6P43360 314 aa15.76■□□□□ 0.11
UPF3A-208ENST00000484246 KCNJ1P48048 391 aa15.76■□□□□ 0.11
UPF3A-208ENST00000484246 CDK16Q00536 496 aa15.76■□□□□ 0.11
UPF3A-208ENST00000484246 CDH17Q12864 832 aa15.76■□□□□ 0.11
UPF3A-208ENST00000484246 SPARCL1Q14515 664 aa15.76■□□□□ 0.11
UPF3A-208ENST00000484246 GKN2Q86XP6 184 aa15.76■□□□□ 0.11
UPF3A-208ENST00000484246 PHYKPLQ8IUZ5 450 aa15.76■□□□□ 0.11
UPF3A-208ENST00000484246 GPBAR1Q8TDU6 330 aa15.76■□□□□ 0.11
UPF3A-208ENST00000484246 SPATA16Q9BXB7 569 aa15.76■□□□□ 0.11
UPF3A-208ENST00000484246 CARS2Q9HA77 564 aaKnown RBP15.76■□□□□ 0.11
UPF3A-208ENST00000484246 CYP4F12Q9HCS2 524 aa15.76■□□□□ 0.11
UPF3A-208ENST00000484246 MRPL40Q9NQ50 206 aaKnown RBP15.76■□□□□ 0.11
UPF3A-208ENST00000484246 CASS4Q9NQ75 786 aa15.76■□□□□ 0.11
UPF3A-208ENST00000484246 EVA1BQ9NVM1 165 aa15.76■□□□□ 0.11
UPF3A-208ENST00000484246 SUFUQ9UMX1 484 aa15.76■□□□□ 0.11
UPF3A-208ENST00000484246 WASF3Q9UPY6 502 aa15.76■□□□□ 0.11
UPF3A-208ENST00000484246 ARL5AQ9Y689 179 aa15.76■□□□□ 0.11
UPF3A-208ENST00000484246 OAS3Q9Y6K5 1087 aaKnown RBP15.76■□□□□ 0.11
UPF3A-208ENST00000484246 U3KQA8 63 aa15.76■□□□□ 0.11
UPF3A-208ENST00000484246 CABIN1Q9Y6J0 2220 aa15.76■□□□□ 0.11
UPF3A-208ENST00000484246 TP53BP1Q12888 1972 aaPredicted RBP15.76■□□□□ 0.11
UPF3A-208ENST00000484246 GLYATL1P3A0A0U1RQE8 302 aa15.75■□□□□ 0.11
UPF3A-208ENST00000484246 MED19A0JLT2 244 aaPredicted RBP15.75■□□□□ 0.11
UPF3A-208ENST00000484246 H7C0S8 307 aa15.75■□□□□ 0.11
UPF3A-208ENST00000484246 ZNF185O15231 689 aa15.75■□□□□ 0.11
UPF3A-208ENST00000484246 INPP4BO15327 924 aa15.75■□□□□ 0.11
UPF3A-208ENST00000484246 YY2O15391 372 aa15.75■□□□□ 0.11
UPF3A-208ENST00000484246 DNAJC6O75061 913 aa15.75■□□□□ 0.11
UPF3A-208ENST00000484246 ANXA6P08133 673 aa15.75■□□□□ 0.11
UPF3A-208ENST00000484246 CELA2BP08218 269 aaPredicted RBP15.75■□□□□ 0.11
UPF3A-208ENST00000484246 COILP38432 576 aaPredicted RBP15.75■□□□□ 0.11
UPF3A-208ENST00000484246 SHC2P98077 582 aa15.75■□□□□ 0.11
UPF3A-208ENST00000484246 ITGA9Q13797 1035 aa15.75■□□□□ 0.11
UPF3A-208ENST00000484246 LRP8Q14114 963 aa15.75■□□□□ 0.11
UPF3A-208ENST00000484246 PYCR3Q53H96 274 aa15.75■□□□□ 0.11
UPF3A-208ENST00000484246 GSTA5Q7RTV2 222 aa15.75■□□□□ 0.11
UPF3A-208ENST00000484246 RAB44Q7Z6P3 723 aaPredicted RBP15.75■□□□□ 0.11
UPF3A-208ENST00000484246 PRUNE1Q86TP1 453 aa15.75■□□□□ 0.11
UPF3A-208ENST00000484246 TRIM74Q86UV6 250 aa15.75■□□□□ 0.11
UPF3A-208ENST00000484246 CREG2Q8IUH2 290 aa15.75■□□□□ 0.11
UPF3A-208ENST00000484246 PTCD2Q8WV60 388 aaKnown RBP15.75■□□□□ 0.11
UPF3A-208ENST00000484246 SLCO2A1Q92959 643 aa15.75■□□□□ 0.11
UPF3A-208ENST00000484246 APOLD1Q96LR9 279 aa15.75■□□□□ 0.11
UPF3A-208ENST00000484246 OR2M4Q96R27 311 aa15.75■□□□□ 0.11
UPF3A-208ENST00000484246 AP1M1Q9BXS5 423 aa15.75■□□□□ 0.11
UPF3A-208ENST00000484246 GSDMCQ9BYG8 508 aa15.75■□□□□ 0.11
UPF3A-208ENST00000484246 TMEM168Q9H0V1 697 aa15.75■□□□□ 0.11
UPF3A-208ENST00000484246 TRIM39Q9HCM9 518 aa15.75■□□□□ 0.11
UPF3A-208ENST00000484246 BPIFA1Q9NP55 256 aa15.75■□□□□ 0.11
UPF3A-208ENST00000484246 SMARCAL1Q9NZC9 954 aa15.75■□□□□ 0.11
UPF3A-208ENST00000484246 RNF14Q9UBS8 474 aa15.75■□□□□ 0.11
UPF3A-208ENST00000484246 TMPRSS11EQ9UL52 423 aa15.75■□□□□ 0.11
UPF3A-208ENST00000484246 RIMKLBQ9ULI2 386 aa15.75■□□□□ 0.11
UPF3A-208ENST00000484246 SAR1BQ9Y6B6 198 aa15.75■□□□□ 0.11
UPF3A-208ENST00000484246 CNOT1A5YKK6 2376 aaKnown RBP15.74■□□□□ 0.11
UPF3A-208ENST00000484246 MROH6A6NGR9 719 aa15.74■□□□□ 0.11
UPF3A-208ENST00000484246 AGAP14A8MT82 685 aa15.74■□□□□ 0.11
UPF3A-208ENST00000484246 E7EVH7 732 aa15.74■□□□□ 0.11
UPF3A-208ENST00000484246 AP3B1O00203 1094 aa15.74■□□□□ 0.11
UPF3A-208ENST00000484246 VEGFDO43915 354 aa15.74■□□□□ 0.11
UPF3A-208ENST00000484246 APRTP07741 180 aa15.74■□□□□ 0.11
UPF3A-208ENST00000484246 TPSB2P20231 275 aa15.74■□□□□ 0.11
UPF3A-208ENST00000484246 HADHAP40939 763 aa15.74■□□□□ 0.11
UPF3A-208ENST00000484246 POLD2P49005 469 aa15.74■□□□□ 0.11
UPF3A-208ENST00000484246 ETF1P62495 437 aaKnown RBP15.74■□□□□ 0.11
UPF3A-208ENST00000484246 XIAPP98170 497 aa15.74■□□□□ 0.11
UPF3A-208ENST00000484246 ILF3Q12906 894 aaKnown RBP eCLIP15.74■□□□□ 0.11
UPF3A-208ENST00000484246 C1orf61Q13536 156 aa15.74■□□□□ 0.11
UPF3A-208ENST00000484246 TPSAB1Q15661 275 aa15.74■□□□□ 0.11
UPF3A-208ENST00000484246 CHRNA6Q15825 494 aa15.74■□□□□ 0.11
UPF3A-208ENST00000484246 DEFB133Q30KQ1 61 aa15.74■□□□□ 0.11
UPF3A-208ENST00000484246 ATP13A5Q4VNC0 1218 aa15.74■□□□□ 0.11
UPF3A-208ENST00000484246 ARMC3Q5W041 872 aa15.74■□□□□ 0.11
UPF3A-208ENST00000484246 CCDC137Q6PK04 289 aaKnown RBP15.74■□□□□ 0.11
UPF3A-208ENST00000484246 OGFOD3Q6PK18 319 aa15.74■□□□□ 0.11
UPF3A-208ENST00000484246 RD3Q7Z3Z2 195 aa15.74■□□□□ 0.11
UPF3A-208ENST00000484246 SLCO6A1Q86UG4 719 aa15.74■□□□□ 0.11
UPF3A-208ENST00000484246 ARL10Q8N8L6 244 aa15.74■□□□□ 0.11
UPF3A-208ENST00000484246 DDHD1Q8NEL9 900 aa15.74■□□□□ 0.11
UPF3A-208ENST00000484246 OR4K2Q8NGD2 314 aa15.74■□□□□ 0.11
UPF3A-208ENST00000484246 GRK7Q8WTQ7 553 aa15.74■□□□□ 0.11
UPF3A-208ENST00000484246 SCG3Q8WXD2 468 aaKnown RBP15.74■□□□□ 0.11
UPF3A-208ENST00000484246 PEX13Q92968 403 aa15.74■□□□□ 0.11
UPF3A-208ENST00000484246 RANBP9Q96S59 729 aa15.74■□□□□ 0.11
UPF3A-208ENST00000484246 APPL1Q9UKG1 709 aa15.74■□□□□ 0.11
UPF3A-208ENST00000484246 LRP4O75096 1905 aa15.73■□□□□ 0.11
UPF3A-208ENST00000484246 CHUKO15111 745 aa15.73■□□□□ 0.11
UPF3A-208ENST00000484246 NUAK1O60285 661 aa15.73■□□□□ 0.11
UPF3A-208ENST00000484246 RFPL3O75679 317 aa15.73■□□□□ 0.11
UPF3A-208ENST00000484246 SLC25A14O95258 325 aaPredicted RBP15.73■□□□□ 0.11
UPF3A-208ENST00000484246 PRAMEF1O95521 474 aa15.73■□□□□ 0.11
UPF3A-208ENST00000484246 GP1BAP07359 652 aa15.73■□□□□ 0.11
UPF3A-208ENST00000484246 ADCY8P40145 1251 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms