RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 LBRQ14739 615 aaKnown RBP6.93□□□□□ -1.3
BRCA1-216ENST00000484087 PCSK7Q16549 785 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 UGP2Q16851 508 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 PRAMEF14Q5SWL7 426 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 CERCAMQ5T4B2 595 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 MROH9Q5TGP6 573 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 LVRNQ6Q4G3 990 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 PACS1Q6VY07 963 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-216ENST00000484087 SLC36A4Q6YBV0 504 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 ZNF783Q6ZMS7 281 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 TIFABQ6ZNK6 161 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 DPY19L3Q6ZPD9 716 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 DGLUCYQ7Z3D6 616 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 KCNMB4Q86W47 210 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 LRRC34Q8IZ02 419 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 BANPQ8N9N5 519 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 CCDC197Q8NCU1 140 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 OR2A12Q8NGT7 310 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 OR14C36Q8NHC7 312 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 SPATA22Q8NHS9 363 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 PIP4K2CQ8TBX8 421 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 TCP10LQ8TDR4 215 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 MZB1Q8WU39 189 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 VOPP1Q96AW1 172 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 IFT43Q96FT9 208 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 IMP4Q96G21 291 aaKnown RBP6.93□□□□□ -1.3
BRCA1-216ENST00000484087 OXNAD1Q96HP4 312 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-216ENST00000484087 ZNF419Q96HQ0 510 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-216ENST00000484087 CAMK1GQ96NX5 476 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 ZNF317Q96PQ6 595 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-216ENST00000484087 OMDQ99983 421 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 APOL2Q9BQE5 337 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 GORASP1Q9BQQ3 440 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 ORAI3Q9BRQ5 295 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 KIFC1Q9BW19 673 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 CINPQ9BW66 212 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-216ENST00000484087 PITPNM3Q9BZ71 974 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 BTBD1Q9H0C5 482 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 VPS11Q9H270 941 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 ZDHHC6Q9H6R6 413 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 MRM3Q9HC36 420 aaKnown RBP6.93□□□□□ -1.3
BRCA1-216ENST00000484087 FZD3Q9NPG1 666 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 SMYD2Q9NRG4 433 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 C20orf96Q9NUD7 363 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-216ENST00000484087 UBA2Q9UBT2 640 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-216ENST00000484087 SEPT3Q9UH03 358 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 SUN2Q9UH99 717 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 ITM2BQ9Y287 266 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-216ENST00000484087 KNL1Q8NG31 2342 aa6.93□□□□□ -1.3
BRCA1-216ENST00000484087 TDRD6O60522 2096 aaKnown RBP6.93□□□□□ -1.3
BRCA1-216ENST00000484087 CELSR3Q9NYQ7 3312 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 A0A1B0GVT2 93 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 HEATR9A2RTY3 570 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 METTL12A8MUP2 240 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 KPNA3O00505 521 aaPredicted RBP6.92□□□□□ -1.3
BRCA1-216ENST00000484087 SLC30A4O14863 429 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 INSIG1O15503 277 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 KDELR3O43731 214 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 LRP3O75074 770 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 GLRA3O75311 464 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 LEFTY1O75610 366 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 TOP3BO95985 862 aaKnown RBP6.92□□□□□ -1.3
BRCA1-216ENST00000484087 IGLV3-19P01714 112 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 C1QAP02745 245 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 WNT1P04628 370 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 PRKCGP05129 697 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 SERPINF2P08697 491 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 ERVK-10P10266 1014 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 TPH1P17752 444 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 HLA-DPA1P20036 260 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 CD86P42081 329 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 RGRP47804 291 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 CCNHP51946 323 aaPredicted RBP6.92□□□□□ -1.3
BRCA1-216ENST00000484087 CSE1LP55060 971 aaKnown RBP6.92□□□□□ -1.3
BRCA1-216ENST00000484087 TAS2R38P59533 333 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 SLC10A7Q0GE19 358 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 ILF2Q12905 390 aaKnown RBP6.92□□□□□ -1.3
BRCA1-216ENST00000484087 SLC12A1Q13621 1099 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 THOC5Q13769 683 aaKnown RBP6.92□□□□□ -1.3
BRCA1-216ENST00000484087 BMPR2Q13873 1038 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 SEPT6Q14141 434 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 MPP2Q14168 576 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 ITIH4Q14624 930 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 PDK4Q16654 411 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 TTC31Q49AM3 519 aaPredicted RBP6.92□□□□□ -1.3
BRCA1-216ENST00000484087 PPM1JQ5JR12 505 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 AGBL4Q5VU57 503 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 PEAR1Q5VY43 1037 aaPredicted RBP6.92□□□□□ -1.3
BRCA1-216ENST00000484087 CES3Q6UWW8 571 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 NLRP9Q7RTR0 991 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 STRA8Q7Z7C7 330 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 C11orf74Q86VG3 221 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 NDUFAF2Q8N183 169 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 RYBPQ8N488 228 aaPredicted RBP6.92□□□□□ -1.3
BRCA1-216ENST00000484087 MINDY1Q8N5J2 469 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 ZNF557Q8N988 423 aaPredicted RBP6.92□□□□□ -1.3
BRCA1-216ENST00000484087 CALML6Q8TD86 181 aa6.92□□□□□ -1.3
BRCA1-216ENST00000484087 NETO1Q8TDF5 533 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms