RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 VPS26AO75436 327 aa26.08■■□□□ 1.77
SHOX2-204ENST00000483851 FMO4P31512 558 aa26.08■■□□□ 1.77
SHOX2-204ENST00000483851 ABCE1P61221 599 aaKnown RBP26.08■■□□□ 1.77
SHOX2-204ENST00000483851 ARSIQ5FYB1 569 aa26.08■■□□□ 1.77
SHOX2-204ENST00000483851 TMEM207Q6UWW9 146 aa26.08■■□□□ 1.77
SHOX2-204ENST00000483851 DTX3LQ8TDB6 740 aa26.08■■□□□ 1.77
SHOX2-204ENST00000483851 MYLIPQ8WY64 445 aa26.08■■□□□ 1.77
SHOX2-204ENST00000483851 P2RY12Q9H244 342 aa26.08■■□□□ 1.77
SHOX2-204ENST00000483851 LRMDAQ9H2I8 198 aa26.08■■□□□ 1.77
SHOX2-204ENST00000483851 FAM96AQ9H5X1 160 aa26.08■■□□□ 1.77
SHOX2-204ENST00000483851 ASB8Q9H765 288 aa26.08■■□□□ 1.77
SHOX2-204ENST00000483851 KCNK4Q9NYG8 393 aa26.08■■□□□ 1.77
SHOX2-204ENST00000483851 OAS3Q9Y6K5 1087 aaKnown RBP26.08■■□□□ 1.77
SHOX2-204ENST00000483851 DENND4AQ7Z401 1863 aa26.08■■□□□ 1.77
SHOX2-204ENST00000483851 A0A0U1RQS6 177 aa26.08■■□□□ 1.77
SHOX2-204ENST00000483851 EDDM13A0A1B0GTR0 161 aa26.08■■□□□ 1.77
SHOX2-204ENST00000483851 PRMT5O14744 637 aaPredicted RBP26.08■■□□□ 1.77
SHOX2-204ENST00000483851 ATP6V1G2O95670 118 aa26.08■■□□□ 1.77
SHOX2-204ENST00000483851 KRT16P08779 473 aa26.08■■□□□ 1.77
SHOX2-204ENST00000483851 ZNF7P17097 686 aaPredicted RBP26.08■■□□□ 1.77
SHOX2-204ENST00000483851 ATP5F1P24539 256 aaPredicted RBP26.08■■□□□ 1.77
SHOX2-204ENST00000483851 DNAJB13P59910 316 aa26.08■■□□□ 1.77
SHOX2-204ENST00000483851 UGT3A1Q6NUS8 523 aa26.08■■□□□ 1.77
SHOX2-204ENST00000483851 FAM151BQ6UXP7 276 aa26.08■■□□□ 1.77
SHOX2-204ENST00000483851 TSPAN33Q86UF1 283 aa26.08■■□□□ 1.77
SHOX2-204ENST00000483851 KIF2BQ8N4N8 673 aa26.08■■□□□ 1.77
SHOX2-204ENST00000483851 ANKRD49Q8WVL7 239 aa26.08■■□□□ 1.77
SHOX2-204ENST00000483851 NXPE3Q969Y0 559 aa26.08■■□□□ 1.77
SHOX2-204ENST00000483851 RAD18Q9NS91 495 aa26.08■■□□□ 1.77
SHOX2-204ENST00000483851 MUC22E2RYF6 1773 aaPredicted RBP26.07■■□□□ 1.76
SHOX2-204ENST00000483851 UPK3BL1B0FP48 263 aa26.07■■□□□ 1.76
SHOX2-204ENST00000483851 UPK3BL2E5RIL1 263 aa26.07■■□□□ 1.76
SHOX2-204ENST00000483851 PRNPP04156 253 aa26.07■■□□□ 1.76
SHOX2-204ENST00000483851 GJA4P35212 333 aa26.07■■□□□ 1.76
SHOX2-204ENST00000483851 PFKPQ01813 784 aa26.07■■□□□ 1.76
SHOX2-204ENST00000483851 PTSQ03393 145 aa26.07■■□□□ 1.76
SHOX2-204ENST00000483851 HNRNPA1L2Q32P51 320 aaKnown RBP26.07■■□□□ 1.76
SHOX2-204ENST00000483851 WDR75Q8IWA0 830 aaKnown RBP26.07■■□□□ 1.76
SHOX2-204ENST00000483851 RBFAQ8N0V3 343 aa26.07■■□□□ 1.76
SHOX2-204ENST00000483851 PIWIL2Q8TC59 973 aaKnown RBP26.07■■□□□ 1.76
SHOX2-204ENST00000483851 PBXIP1Q96AQ6 731 aa26.07■■□□□ 1.76
SHOX2-204ENST00000483851 C20orf27Q9GZN8 174 aa26.07■■□□□ 1.76
SHOX2-204ENST00000483851 B4GALT6Q9UBX8 382 aa26.07■■□□□ 1.76
SHOX2-204ENST00000483851 MED16Q9Y2X0 877 aa26.07■■□□□ 1.76
SHOX2-204ENST00000483851 COL4A3Q01955 1670 aa26.07■■□□□ 1.76
SHOX2-204ENST00000483851 RANBP2P49792 3224 aaKnown RBP26.07■■□□□ 1.76
SHOX2-204ENST00000483851 CHUKO15111 745 aa26.06■■□□□ 1.76
SHOX2-204ENST00000483851 TBX10O75333 385 aa26.06■■□□□ 1.76
SHOX2-204ENST00000483851 CHRM1P11229 460 aaPredicted RBP26.06■■□□□ 1.76
SHOX2-204ENST00000483851 LHCGRP22888 699 aa26.06■■□□□ 1.76
SHOX2-204ENST00000483851 VIPR1P32241 457 aa26.06■■□□□ 1.76
SHOX2-204ENST00000483851 SERPINB5P36952 375 aa26.06■■□□□ 1.76
SHOX2-204ENST00000483851 OPRD1P41143 372 aa26.06■■□□□ 1.76
SHOX2-204ENST00000483851 ARFIP2P53365 341 aa26.06■■□□□ 1.76
SHOX2-204ENST00000483851 ARHGEF7Q14155 803 aa26.06■■□□□ 1.76
SHOX2-204ENST00000483851 E2F5Q15329 346 aa26.06■■□□□ 1.76
SHOX2-204ENST00000483851 NUDT18Q6ZVK8 323 aa26.06■■□□□ 1.76
SHOX2-204ENST00000483851 MTSS1LQ765P7 747 aa26.06■■□□□ 1.76
SHOX2-204ENST00000483851 PIM3Q86V86 326 aa26.06■■□□□ 1.76
SHOX2-204ENST00000483851 RAVER1Q8IY67 606 aaKnown RBP26.06■■□□□ 1.76
SHOX2-204ENST00000483851 NKAPQ8N5F7 415 aaKnown RBP26.06■■□□□ 1.76
SHOX2-204ENST00000483851 RHEBL1Q8TAI7 183 aa26.06■■□□□ 1.76
SHOX2-204ENST00000483851 NECTIN4Q96NY8 510 aa26.06■■□□□ 1.76
SHOX2-204ENST00000483851 PLA2G2FQ9BZM2 168 aa26.06■■□□□ 1.76
SHOX2-204ENST00000483851 CDH19Q9H159 772 aa26.06■■□□□ 1.76
SHOX2-204ENST00000483851 SAR1AQ9NR31 198 aa26.06■■□□□ 1.76
SHOX2-204ENST00000483851 DCTN4Q9UJW0 460 aa26.06■■□□□ 1.76
SHOX2-204ENST00000483851 BPTFQ12830 3046 aa26.06■■□□□ 1.76
SHOX2-204ENST00000483851 F8W8V4 182 aa26.06■■□□□ 1.76
SHOX2-204ENST00000483851 H3BMM5 538 aa26.06■■□□□ 1.76
SHOX2-204ENST00000483851 DLX3O60479 287 aa26.06■■□□□ 1.76
SHOX2-204ENST00000483851 ATP6V0D1P61421 351 aa26.06■■□□□ 1.76
SHOX2-204ENST00000483851 COL19A1Q14993 1142 aa26.06■■□□□ 1.76
SHOX2-204ENST00000483851 FNDC3BQ53EP0 1204 aaKnown RBP26.06■■□□□ 1.76
SHOX2-204ENST00000483851 CLNKQ7Z7G1 428 aa26.06■■□□□ 1.76
SHOX2-204ENST00000483851 SERPINA9Q86WD7 417 aa26.06■■□□□ 1.76
SHOX2-204ENST00000483851 SLC22A9Q8IVM8 553 aa26.06■■□□□ 1.76
SHOX2-204ENST00000483851 TMIEQ8NEW7 156 aa26.06■■□□□ 1.76
SHOX2-204ENST00000483851 INPP5DQ92835 1189 aa26.06■■□□□ 1.76
SHOX2-204ENST00000483851 SLC7A6OSQ96CW6 309 aaPredicted RBP26.06■■□□□ 1.76
SHOX2-204ENST00000483851 GATA5Q9BWX5 397 aaPredicted RBP26.06■■□□□ 1.76
SHOX2-204ENST00000483851 DERL2Q9GZP9 239 aa26.06■■□□□ 1.76
SHOX2-204ENST00000483851 TFB2MQ9H5Q4 396 aaKnown RBP26.06■■□□□ 1.76
SHOX2-204ENST00000483851 STN1Q9H668 368 aaKnown RBP26.06■■□□□ 1.76
SHOX2-204ENST00000483851 PKD2L2Q9NZM6 624 aa26.06■■□□□ 1.76
SHOX2-204ENST00000483851 NFKBIL1Q9UBC1 381 aaPredicted RBP26.06■■□□□ 1.76
SHOX2-204ENST00000483851 FNDC3AQ9Y2H6 1198 aaKnown RBP26.06■■□□□ 1.76
SHOX2-204ENST00000483851 RGSL1A5PLK6 1076 aa26.05■■□□□ 1.76
SHOX2-204ENST00000483851 CTSLP07711 333 aa26.05■■□□□ 1.76
SHOX2-204ENST00000483851 BMP1P13497 986 aa26.05■■□□□ 1.76
SHOX2-204ENST00000483851 CD1DP15813 335 aa26.05■■□□□ 1.76
SHOX2-204ENST00000483851 ISCA2Q86U28 154 aa26.05■■□□□ 1.76
SHOX2-204ENST00000483851 MTDHQ86UE4 582 aaKnown RBP26.05■■□□□ 1.76
SHOX2-204ENST00000483851 SPATA6LQ8N4H0 392 aa26.05■■□□□ 1.76
SHOX2-204ENST00000483851 UTP4Q969X6 686 aaKnown RBP26.05■■□□□ 1.76
SHOX2-204ENST00000483851 TMEM237Q96Q45 408 aa26.05■■□□□ 1.76
SHOX2-204ENST00000483851 DRC3Q9H069 523 aa26.05■■□□□ 1.76
SHOX2-204ENST00000483851 TMEM245Q9H330 911 aa26.05■■□□□ 1.76
SHOX2-204ENST00000483851 ITM2AO43736 263 aa26.04■■□□□ 1.76
SHOX2-204ENST00000483851 TIMP2P16035 220 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms