RNA–Protein interactions for RNA: ENST00000483768.1

ZNF561-216, Transcript of zinc finger protein 561, humanhuman

TSL 1 (best)

Gene ZNF561, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561-216ENST00000483768 VPS50Q96JG6 964 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 CFAP57Q96MR6 1250 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 ZNF558Q96NG5 402 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 FAM111AQ96PZ2 611 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 SH3GL2Q99962 352 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 DPCDQ9BVM2 203 aaPredicted RBP3.31□□□□□ -1.88
ZNF561-216ENST00000483768 NPLQ9BXD5 320 aaPredicted RBP3.31□□□□□ -1.88
ZNF561-216ENST00000483768 TRIM31Q9BZY9 425 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 OSGEPL1Q9H4B0 414 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 TASP1Q9H6P5 420 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 KIF9Q9HAQ2 790 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 KCNK9Q9NPC2 374 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 SLC2A4RGQ9NR83 387 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 IARS2Q9NSE4 1012 aaKnown RBP3.31□□□□□ -1.88
ZNF561-216ENST00000483768 STEAP1Q9UHE8 339 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 CTNNA3Q9UI47 895 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 APPL1Q9UKG1 709 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 PLAGL1Q9UM63 463 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 VPS4AQ9UN37 437 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 SMC3Q9UQE7 1217 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 RPH3AQ9Y2J0 694 aaPredicted RBP3.31□□□□□ -1.88
ZNF561-216ENST00000483768 LIPGQ9Y5X9 500 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 NFS1Q9Y697 457 aa3.31□□□□□ -1.88
ZNF561-216ENST00000483768 ZSWIM8A7E2V4 1837 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 MUC3AQ02505 3323 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 PRUNE2Q8WUY3 3088 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 CCDC195A0A1B0GUA6 201 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 YDJCA8MPS7 323 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 B5MCH6 92 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 UBE2Q2LH0YL09 131 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 PES1O00541 588 aaKnown RBP3.3□□□□□ -1.88
ZNF561-216ENST00000483768 MCF2LO15068 1137 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 PLRG1O43660 514 aaKnown RBP3.3□□□□□ -1.88
ZNF561-216ENST00000483768 MITFO75030 526 aaPredicted RBP3.3□□□□□ -1.88
ZNF561-216ENST00000483768 USP12O75317 370 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 NKX2-2O95096 273 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 ONECUT2O95948 504 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 KLKB1P03952 638 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 GBAP04062 536 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 ERBB2P04626 1255 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 ALPPP05187 535 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 ZFYP08048 801 aaPredicted RBP3.3□□□□□ -1.88
ZNF561-216ENST00000483768 CHRM4P08173 479 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 SRPRAP08240 638 aaKnown RBP3.3□□□□□ -1.88
ZNF561-216ENST00000483768 CYP3A4P08684 503 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 ALPPL2P10696 532 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 UROSP10746 265 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 SRCP12931 536 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 MMP9P14780 707 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 MAKP20794 623 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 CASTP20810 708 aaKnown RBP3.3□□□□□ -1.88
ZNF561-216ENST00000483768 IL10P22301 178 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 PON1P27169 355 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 RPA1P27694 616 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 POU1F1P28069 291 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 CLK3P49761 638 aaKnown RBP3.3□□□□□ -1.88
ZNF561-216ENST00000483768 SULT1E1P49888 294 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 SUOXP51687 545 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 CLCN3P51790 818 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 PNLIPRP2P54317 469 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 PDE1AP54750 535 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 ADAM8P78325 824 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 KCNJ10P78508 379 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 ARF5P84085 180 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 TLE3Q04726 772 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 PPATQ06203 517 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 GFPT1Q06210 699 aaPredicted RBP3.3□□□□□ -1.88
ZNF561-216ENST00000483768 ZNF844Q08AG5 666 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 MZT1Q08AG7 82 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 TEFQ10587 303 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 CBFBQ13951 182 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 RRP1BQ14684 758 aaKnown RBP3.3□□□□□ -1.88
ZNF561-216ENST00000483768 CSRP2Q16527 193 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 BMT2Q1RMZ1 405 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 C15orf59Q2T9L4 293 aaPredicted RBP3.3□□□□□ -1.88
ZNF561-216ENST00000483768 GXYLT1Q4G148 440 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 KCNT1Q5JUK3 1230 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 FNDC7Q5VTL7 733 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 ATG9BQ674R7 924 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 FBXO46Q6PJ61 603 aaPredicted RBP3.3□□□□□ -1.88
ZNF561-216ENST00000483768 C17orf99Q6UX52 265 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 CCBE1Q6UXH8 406 aaPredicted RBP3.3□□□□□ -1.88
ZNF561-216ENST00000483768 PLEKHM3Q6ZWE6 761 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 USP50Q70EL3 339 aaPredicted RBP3.3□□□□□ -1.88
ZNF561-216ENST00000483768 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.3□□□□□ -1.88
ZNF561-216ENST00000483768 ADCK1Q86TW2 530 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 GPAT4Q86UL3 456 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 NBPF5PQ86XG9 351 aaPredicted RBP3.3□□□□□ -1.88
ZNF561-216ENST00000483768 DZIP1Q86YF9 867 aaKnown RBP3.3□□□□□ -1.88
ZNF561-216ENST00000483768 ABRAQ8N0Z2 381 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 AMER2Q8N7J2 671 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 POC1BQ8TC44 478 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 BCAS4Q8TDM0 211 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.3□□□□□ -1.88
ZNF561-216ENST00000483768 C2CD4CQ8TF44 421 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 NSMCE1Q8WV22 266 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 CTNNBL1Q8WYA6 563 aaPredicted RBP3.3□□□□□ -1.88
ZNF561-216ENST00000483768 OVCA2Q8WZ82 227 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 ST8SIA2Q92186 375 aa3.3□□□□□ -1.88
ZNF561-216ENST00000483768 LARP4BQ92615 738 aaKnown RBP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms