RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 WDR55Q9H6Y2 383 aaPredicted RBP8.79□□□□□ -1
CDC42SE1-204ENST00000483763 ATP13A3Q9H7F0 1226 aa8.79□□□□□ -1
CDC42SE1-204ENST00000483763 SAR1AQ9NR31 198 aa8.79□□□□□ -1
CDC42SE1-204ENST00000483763 HACD3Q9P035 362 aa8.79□□□□□ -1
CDC42SE1-204ENST00000483763 STK38LQ9Y2H1 464 aa8.79□□□□□ -1
CDC42SE1-204ENST00000483763 PKP3Q9Y446 797 aa8.79□□□□□ -1
CDC42SE1-204ENST00000483763 GOLGA8QA0A0J9YX86 632 aa8.79□□□□□ -1
CDC42SE1-204ENST00000483763 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.79□□□□□ -1
CDC42SE1-204ENST00000483763 GOLGA8OA6NCC3 632 aa8.79□□□□□ -1
CDC42SE1-204ENST00000483763 ANTXRLA6NF34 631 aa8.79□□□□□ -1
CDC42SE1-204ENST00000483763 LRRC14BA6NHZ5 514 aa8.79□□□□□ -1
CDC42SE1-204ENST00000483763 GOLGA8NF8WBI6 632 aa8.79□□□□□ -1
CDC42SE1-204ENST00000483763 PPP6CO00743 305 aa8.79□□□□□ -1
CDC42SE1-204ENST00000483763 UBFD1O14562 309 aaKnown RBP8.79□□□□□ -1
CDC42SE1-204ENST00000483763 SOCS5O75159 536 aa8.79□□□□□ -1
CDC42SE1-204ENST00000483763 RHOBTB1O94844 696 aa8.79□□□□□ -1
CDC42SE1-204ENST00000483763 PRAMEF1O95521 474 aa8.79□□□□□ -1
CDC42SE1-204ENST00000483763 TSPAN12O95859 305 aa8.79□□□□□ -1
CDC42SE1-204ENST00000483763 UGT2B4P06133 528 aa8.79□□□□□ -1
CDC42SE1-204ENST00000483763 SERPINA6P08185 405 aa8.79□□□□□ -1
CDC42SE1-204ENST00000483763 ARSAP15289 507 aa8.79□□□□□ -1
CDC42SE1-204ENST00000483763 BPIP17213 487 aa8.79□□□□□ -1
CDC42SE1-204ENST00000483763 CALRP27797 417 aaKnown RBP8.79□□□□□ -1
CDC42SE1-204ENST00000483763 SLC26A3P40879 764 aa8.79□□□□□ -1
CDC42SE1-204ENST00000483763 RPL14P50914 215 aaKnown RBP8.79□□□□□ -1
CDC42SE1-204ENST00000483763 SNRPD1P62314 119 aaKnown RBP8.79□□□□□ -1
CDC42SE1-204ENST00000483763 PDAP1Q13442 181 aaKnown RBP8.79□□□□□ -1
CDC42SE1-204ENST00000483763 KCNC3Q14003 757 aa8.79□□□□□ -1
CDC42SE1-204ENST00000483763 DHCR24Q15392 516 aa8.79□□□□□ -1
CDC42SE1-204ENST00000483763 RAB30Q15771 203 aa8.79□□□□□ -1
CDC42SE1-204ENST00000483763 CRTC1Q6UUV9 634 aa8.79□□□□□ -1
CDC42SE1-204ENST00000483763 TAS2R42Q7RTR8 314 aa8.79□□□□□ -1
CDC42SE1-204ENST00000483763 CLDN19Q8N6F1 224 aa8.79□□□□□ -1
CDC42SE1-204ENST00000483763 ZNF366Q8N895 744 aa8.79□□□□□ -1
CDC42SE1-204ENST00000483763 SIDT2Q8NBJ9 832 aaKnown RBP8.79□□□□□ -1
CDC42SE1-204ENST00000483763 LEMD2Q8NC56 503 aa8.79□□□□□ -1
CDC42SE1-204ENST00000483763 GRIN3AQ8TCU5 1115 aa8.79□□□□□ -1
CDC42SE1-204ENST00000483763 SCG3Q8WXD2 468 aaKnown RBP8.79□□□□□ -1
CDC42SE1-204ENST00000483763 TCF12Q99081 682 aa8.79□□□□□ -1
CDC42SE1-204ENST00000483763 NUF2Q9BZD4 464 aa8.79□□□□□ -1
CDC42SE1-204ENST00000483763 SUV39H2Q9H5I1 410 aa8.79□□□□□ -1
CDC42SE1-204ENST00000483763 ZDHHC6Q9H6R6 413 aa8.79□□□□□ -1
CDC42SE1-204ENST00000483763 DNAJC28Q9NX36 388 aa8.79□□□□□ -1
CDC42SE1-204ENST00000483763 TAS2R1Q9NYW7 299 aa8.79□□□□□ -1
CDC42SE1-204ENST00000483763 DPP7Q9UHL4 492 aa8.79□□□□□ -1
CDC42SE1-204ENST00000483763 MID2Q9UJV3 735 aa8.79□□□□□ -1
CDC42SE1-204ENST00000483763 RAP2CQ9Y3L5 183 aa8.79□□□□□ -1
CDC42SE1-204ENST00000483763 WDFY4Q6ZS81 3184 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 CFAP73A6NFT4 308 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 CAPN8A6NHC0 703 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 TTC34A8MYJ7 566 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 CDC7O00311 574 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 MGRN1O60291 552 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 SIX3O95343 332 aaPredicted RBP8.78□□□□□ -1
CDC42SE1-204ENST00000483763 SLC34A2O95436 690 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 CYP17A1P05093 508 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 ENO1P06733 434 aaKnown RBP8.78□□□□□ -1
CDC42SE1-204ENST00000483763 RBP1P09455 135 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 FOSL2P15408 326 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 EPHA3P29320 983 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 SERPINA4P29622 427 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 TTPAP49638 278 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 DNAJB13P59910 316 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 PTSQ03393 145 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 NFATC2Q13469 925 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 KRT72Q14CN4 511 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 CARD16Q5EG05 197 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 FAM78AQ5JUQ0 283 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 KLC3Q6P597 504 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 KIAA0907Q7Z7F0 614 aaPredicted RBP8.78□□□□□ -1
CDC42SE1-204ENST00000483763 SFTPA1Q8IWL2 248 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 PHTF2Q8N3S3 785 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 PAF1Q8N7H5 531 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 FRS2Q8WU20 508 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 EXT2Q93063 718 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 ISG20Q96AZ6 181 aaKnown RBP8.78□□□□□ -1
CDC42SE1-204ENST00000483763 NSL1Q96IY1 281 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 MRGPRX3Q96LB0 322 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 ATOH8Q96SQ7 321 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 SIKE1Q9BRV8 207 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 P2RY12Q9H244 342 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 KLC4Q9NSK0 619 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 TAS2R13Q9NYV9 303 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 NCKIPSDQ9NZQ3 722 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 TBC1D14Q9P2M4 693 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 LNPEPQ9UIQ6 1025 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 APOBEC2Q9Y235 224 aaKnown RBP8.78□□□□□ -1
CDC42SE1-204ENST00000483763 OAS3Q9Y6K5 1087 aaKnown RBP8.78□□□□□ -1
CDC42SE1-204ENST00000483763 TCF20Q9UGU0 1960 aaKnown RBP8.78□□□□□ -1
CDC42SE1-204ENST00000483763 A0A1B0GTL3 188 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 E9PBE3 544 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 UBXN8O00124 270 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 NEMP1O14524 444 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 KLHL41O60662 606 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 H2AFYO75367 372 aaKnown RBP8.78□□□□□ -1
CDC42SE1-204ENST00000483763 CISD3P0C7P0 127 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 PKMP14618 531 aaKnown RBP8.78□□□□□ -1
CDC42SE1-204ENST00000483763 HNRNPH1P31943 449 aaKnown RBP8.78□□□□□ -1
CDC42SE1-204ENST00000483763 CDH13P55290 713 aa8.78□□□□□ -1
CDC42SE1-204ENST00000483763 RPL26P61254 145 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms