RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 SPINT3P49223 89 aa13.95□□□□□ -0.18
CLK3-204ENST00000483723 DLX2Q07687 328 aaPredicted RBP13.95□□□□□ -0.18
CLK3-204ENST00000483723 ASPHQ12797 758 aa13.95□□□□□ -0.18
CLK3-204ENST00000483723 COL19A1Q14993 1142 aa13.95□□□□□ -0.18
CLK3-204ENST00000483723 SPDYAQ5MJ70 313 aa13.95□□□□□ -0.18
CLK3-204ENST00000483723 PAQR3Q6TCH7 311 aa13.95□□□□□ -0.18
CLK3-204ENST00000483723 FAM151BQ6UXP7 276 aa13.95□□□□□ -0.18
CLK3-204ENST00000483723 TERB1Q8NA31 727 aa13.95□□□□□ -0.18
CLK3-204ENST00000483723 TXNDC5Q8NBS9 432 aaKnown RBP13.95□□□□□ -0.18
CLK3-204ENST00000483723 RHEBL1Q8TAI7 183 aa13.95□□□□□ -0.18
CLK3-204ENST00000483723 KCNJ9Q92806 393 aa13.95□□□□□ -0.18
CLK3-204ENST00000483723 CCDC126Q96EE4 140 aa13.95□□□□□ -0.18
CLK3-204ENST00000483723 PLEKHG4BQ96PX9 1271 aa13.95□□□□□ -0.18
CLK3-204ENST00000483723 TTC1Q99614 292 aa13.95□□□□□ -0.18
CLK3-204ENST00000483723 TMEM120AQ9BXJ8 343 aa13.95□□□□□ -0.18
CLK3-204ENST00000483723 DERL2Q9GZP9 239 aa13.95□□□□□ -0.18
CLK3-204ENST00000483723 TMEM245Q9H330 911 aa13.95□□□□□ -0.18
CLK3-204ENST00000483723 PRO3102Q9H379 93 aa13.95□□□□□ -0.18
CLK3-204ENST00000483723 TFB2MQ9H5Q4 396 aaKnown RBP13.95□□□□□ -0.18
CLK3-204ENST00000483723 ZNF576Q9H609 170 aa13.95□□□□□ -0.18
CLK3-204ENST00000483723 DNAJC16Q9Y2G8 782 aa13.95□□□□□ -0.18
CLK3-204ENST00000483723 PLXNB3Q9ULL4 1909 aa13.95□□□□□ -0.18
CLK3-204ENST00000483723 CCDC189A1A4V9 331 aa13.95□□□□□ -0.18
CLK3-204ENST00000483723 A8MX80 341 aa13.95□□□□□ -0.18
CLK3-204ENST00000483723 UPK3BL1B0FP48 263 aa13.95□□□□□ -0.18
CLK3-204ENST00000483723 UPK3BL2E5RIL1 263 aa13.95□□□□□ -0.18
CLK3-204ENST00000483723 ZNF195O14628 629 aa13.95□□□□□ -0.18
CLK3-204ENST00000483723 NPHS1O60500 1241 aa13.95□□□□□ -0.18
CLK3-204ENST00000483723 TBX10O75333 385 aa13.95□□□□□ -0.18
CLK3-204ENST00000483723 VPS26AO75436 327 aa13.95□□□□□ -0.18
CLK3-204ENST00000483723 ECI2O75521 394 aa13.95□□□□□ -0.18
CLK3-204ENST00000483723 UBOX5O94941 541 aa13.95□□□□□ -0.18
CLK3-204ENST00000483723 ZNF7P17097 686 aaPredicted RBP13.95□□□□□ -0.18
CLK3-204ENST00000483723 TFEBP19484 476 aa13.95□□□□□ -0.18
CLK3-204ENST00000483723 SP100P23497 879 aaPredicted RBP13.95□□□□□ -0.18
CLK3-204ENST00000483723 ACRV1P26436 265 aa13.95□□□□□ -0.18
CLK3-204ENST00000483723 VIPR1P32241 457 aa13.95□□□□□ -0.18
CLK3-204ENST00000483723 LTBRP36941 435 aa13.95□□□□□ -0.18
CLK3-204ENST00000483723 MTHFRP42898 656 aa13.95□□□□□ -0.18
CLK3-204ENST00000483723 BNIP1Q12981 228 aa13.95□□□□□ -0.18
CLK3-204ENST00000483723 PDAP1Q13442 181 aaKnown RBP13.95□□□□□ -0.18
CLK3-204ENST00000483723 HNRNPA1L2Q32P51 320 aaKnown RBP13.95□□□□□ -0.18
CLK3-204ENST00000483723 PRRC2BQ5JSZ5 2229 aaKnown RBP13.95□□□□□ -0.18
CLK3-204ENST00000483723 C9orf64Q5T6V5 341 aa13.95□□□□□ -0.18
CLK3-204ENST00000483723 NKAPQ8N5F7 415 aaKnown RBP13.95□□□□□ -0.18
CLK3-204ENST00000483723 ST13P5Q8NFI4 369 aaPredicted RBP13.95□□□□□ -0.18
CLK3-204ENST00000483723 PPP4R1Q8TF05 950 aa13.95□□□□□ -0.18
CLK3-204ENST00000483723 PTERQ96BW5 349 aa13.95□□□□□ -0.18
CLK3-204ENST00000483723 CHFRQ96EP1 664 aa13.95□□□□□ -0.18
CLK3-204ENST00000483723 MSLNLQ96KJ4 702 aa13.95□□□□□ -0.18
CLK3-204ENST00000483723 RIPOR3Q96MK2 946 aa13.95□□□□□ -0.18
CLK3-204ENST00000483723 GPR21Q99679 349 aa13.95□□□□□ -0.18
CLK3-204ENST00000483723 UNKQ9C0B0 810 aaKnown RBP13.95□□□□□ -0.18
CLK3-204ENST00000483723 ACTR5Q9H9F9 607 aaPredicted RBP13.95□□□□□ -0.18
CLK3-204ENST00000483723 NFKBIL1Q9UBC1 381 aaPredicted RBP13.95□□□□□ -0.18
CLK3-204ENST00000483723 GALPQ9UBC7 116 aa13.95□□□□□ -0.18
CLK3-204ENST00000483723 MYO9BQ13459 2157 aa13.94□□□□□ -0.18
CLK3-204ENST00000483723 A0A0G2JND7 137 aa13.94□□□□□ -0.18
CLK3-204ENST00000483723 EDDM13A0A1B0GTR0 161 aa13.94□□□□□ -0.18
CLK3-204ENST00000483723 A0A1W2PPC1 479 aa13.94□□□□□ -0.18
CLK3-204ENST00000483723 GPR39O43194 453 aa13.94□□□□□ -0.18
CLK3-204ENST00000483723 ZBTB14O43829 449 aa13.94□□□□□ -0.18
CLK3-204ENST00000483723 SNUPNO95149 360 aaKnown RBP13.94□□□□□ -0.18
CLK3-204ENST00000483723 UGT1A6P19224 532 aa13.94□□□□□ -0.18
CLK3-204ENST00000483723 UGT1A1P22309 533 aa13.94□□□□□ -0.18
CLK3-204ENST00000483723 UGT1A4P22310 534 aa13.94□□□□□ -0.18
CLK3-204ENST00000483723 NFKBIAP25963 317 aa13.94□□□□□ -0.18
CLK3-204ENST00000483723 UGT1A3P35503 534 aa13.94□□□□□ -0.18
CLK3-204ENST00000483723 UGT1A5P35504 534 aa13.94□□□□□ -0.18
CLK3-204ENST00000483723 SERPINB5P36952 375 aa13.94□□□□□ -0.18
CLK3-204ENST00000483723 NAGLUP54802 743 aa13.94□□□□□ -0.18
CLK3-204ENST00000483723 ATP6V0D1P61421 351 aa13.94□□□□□ -0.18
CLK3-204ENST00000483723 SEMG2Q02383 582 aa13.94□□□□□ -0.18
CLK3-204ENST00000483723 RCN2Q14257 317 aa13.94□□□□□ -0.18
CLK3-204ENST00000483723 PARM1Q6UWI2 310 aa13.94□□□□□ -0.18
CLK3-204ENST00000483723 WDR75Q8IWA0 830 aaKnown RBP13.94□□□□□ -0.18
CLK3-204ENST00000483723 YAF2Q8IY57 180 aa13.94□□□□□ -0.18
CLK3-204ENST00000483723 RBFAQ8N0V3 343 aa13.94□□□□□ -0.18
CLK3-204ENST00000483723 LSMEM2Q8N112 164 aa13.94□□□□□ -0.18
CLK3-204ENST00000483723 TMIEQ8NEW7 156 aa13.94□□□□□ -0.18
CLK3-204ENST00000483723 KIAA1191Q96A73 305 aa13.94□□□□□ -0.18
CLK3-204ENST00000483723 SKA1Q96BD8 255 aa13.94□□□□□ -0.18
CLK3-204ENST00000483723 PDLIM5Q96HC4 596 aaKnown RBP13.94□□□□□ -0.18
CLK3-204ENST00000483723 LRRC37BQ96QE4 947 aa13.94□□□□□ -0.18
CLK3-204ENST00000483723 SLC30A3Q99726 388 aa13.94□□□□□ -0.18
CLK3-204ENST00000483723 STN1Q9H668 368 aaKnown RBP13.94□□□□□ -0.18
CLK3-204ENST00000483723 PNPOQ9NVS9 261 aa13.94□□□□□ -0.18
CLK3-204ENST00000483723 HCN2Q9UL51 889 aa13.94□□□□□ -0.18
CLK3-204ENST00000483723 SLC12A4Q9UP95 1085 aa13.94□□□□□ -0.18
CLK3-204ENST00000483723 FAM50BQ9Y247 325 aa13.94□□□□□ -0.18
CLK3-204ENST00000483723 FNDC3AQ9Y2H6 1198 aaKnown RBP13.94□□□□□ -0.18
CLK3-204ENST00000483723 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.94□□□□□ -0.18
CLK3-204ENST00000483723 DHRS7Q9Y394 339 aa13.94□□□□□ -0.18
CLK3-204ENST00000483723 CEP290O15078 2479 aa13.94□□□□□ -0.18
CLK3-204ENST00000483723 RGSL1A5PLK6 1076 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 C16orf96A6NNT2 1141 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 A8MT66 165 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 ANKRD65E5RJM6 399 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 F8W8V4 182 aa13.93□□□□□ -0.18
CLK3-204ENST00000483723 H3BMM5 538 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms