RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 GPR89BP0CG08 455 aa16.46■□□□□ 0.23
HMGN1-214ENST00000482733 COILP38432 576 aaPredicted RBP16.46■□□□□ 0.23
HMGN1-214ENST00000482733 HADHAP40939 763 aa16.46■□□□□ 0.23
HMGN1-214ENST00000482733 FNTAP49354 379 aa16.46■□□□□ 0.23
HMGN1-214ENST00000482733 DUSP3P51452 185 aaPredicted RBP16.46■□□□□ 0.23
HMGN1-214ENST00000482733 ILKQ13418 452 aa16.46■□□□□ 0.23
HMGN1-214ENST00000482733 PEX6Q13608 980 aa16.46■□□□□ 0.23
HMGN1-214ENST00000482733 LAMB3Q13751 1172 aa16.46■□□□□ 0.23
HMGN1-214ENST00000482733 ITGA9Q13797 1035 aa16.46■□□□□ 0.23
HMGN1-214ENST00000482733 DEFB133Q30KQ1 61 aa16.46■□□□□ 0.23
HMGN1-214ENST00000482733 CCDC137Q6PK04 289 aaKnown RBP16.46■□□□□ 0.23
HMGN1-214ENST00000482733 DOK6Q6PKX4 331 aa16.46■□□□□ 0.23
HMGN1-214ENST00000482733 PPP1R21Q6ZMI0 780 aa16.46■□□□□ 0.23
HMGN1-214ENST00000482733 PRUNE1Q86TP1 453 aa16.46■□□□□ 0.23
HMGN1-214ENST00000482733 PHYKPLQ8IUZ5 450 aa16.46■□□□□ 0.23
HMGN1-214ENST00000482733 DNAAF3Q8N9W5 541 aa16.46■□□□□ 0.23
HMGN1-214ENST00000482733 GRK7Q8WTQ7 553 aa16.46■□□□□ 0.23
HMGN1-214ENST00000482733 GLYATL1Q969I3 302 aa16.46■□□□□ 0.23
HMGN1-214ENST00000482733 GSDMCQ9BYG8 508 aa16.46■□□□□ 0.23
HMGN1-214ENST00000482733 CAAP1Q9H8G2 361 aa16.46■□□□□ 0.23
HMGN1-214ENST00000482733 IL26Q9NPH9 171 aa16.46■□□□□ 0.23
HMGN1-214ENST00000482733 APPL1Q9UKG1 709 aa16.46■□□□□ 0.23
HMGN1-214ENST00000482733 TMEM98Q9Y2Y6 226 aa16.46■□□□□ 0.23
HMGN1-214ENST00000482733 CACNA1AO00555 2505 aa16.45■□□□□ 0.22
HMGN1-214ENST00000482733 AP3B1O00203 1094 aa16.45■□□□□ 0.22
HMGN1-214ENST00000482733 SLC25A14O95258 325 aaPredicted RBP16.45■□□□□ 0.22
HMGN1-214ENST00000482733 APRTP07741 180 aa16.45■□□□□ 0.22
HMGN1-214ENST00000482733 CKMT1AP12532 417 aa16.45■□□□□ 0.22
HMGN1-214ENST00000482733 GNPDA1P46926 289 aa16.45■□□□□ 0.22
HMGN1-214ENST00000482733 POLD2P49005 469 aa16.45■□□□□ 0.22
HMGN1-214ENST00000482733 RPIAP49247 311 aa16.45■□□□□ 0.22
HMGN1-214ENST00000482733 DAB2P98082 770 aa16.45■□□□□ 0.22
HMGN1-214ENST00000482733 ILF3Q12906 894 aaKnown RBP eCLIP16.45■□□□□ 0.22
HMGN1-214ENST00000482733 LRP8Q14114 963 aa16.45■□□□□ 0.22
HMGN1-214ENST00000482733 C6orf132Q5T0Z8 1188 aa16.45■□□□□ 0.22
HMGN1-214ENST00000482733 KCTD16Q68DU8 428 aa16.45■□□□□ 0.22
HMGN1-214ENST00000482733 NYAP1Q6ZVC0 841 aa16.45■□□□□ 0.22
HMGN1-214ENST00000482733 TAF8Q7Z7C8 310 aa16.45■□□□□ 0.22
HMGN1-214ENST00000482733 TRIM74Q86UV6 250 aa16.45■□□□□ 0.22
HMGN1-214ENST00000482733 GALNT13Q8IUC8 556 aa16.45■□□□□ 0.22
HMGN1-214ENST00000482733 OR4K2Q8NGD2 314 aa16.45■□□□□ 0.22
HMGN1-214ENST00000482733 APOLD1Q96LR9 279 aa16.45■□□□□ 0.22
HMGN1-214ENST00000482733 BOCQ9BWV1 1114 aa16.45■□□□□ 0.22
HMGN1-214ENST00000482733 TMEM168Q9H0V1 697 aa16.45■□□□□ 0.22
HMGN1-214ENST00000482733 TRIM39Q9HCM9 518 aa16.45■□□□□ 0.22
HMGN1-214ENST00000482733 SMARCAL1Q9NZC9 954 aa16.45■□□□□ 0.22
HMGN1-214ENST00000482733 RNF14Q9UBS8 474 aa16.45■□□□□ 0.22
HMGN1-214ENST00000482733 COL5A1P20908 1838 aaPredicted RBP16.45■□□□□ 0.22
HMGN1-214ENST00000482733 TP53BP1Q12888 1972 aaPredicted RBP16.44■□□□□ 0.22
HMGN1-214ENST00000482733 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.44■□□□□ 0.22
HMGN1-214ENST00000482733 LDB2O43679 373 aa16.44■□□□□ 0.22
HMGN1-214ENST00000482733 BUD23O43709 281 aaKnown RBP16.44■□□□□ 0.22
HMGN1-214ENST00000482733 DKK1O94907 266 aa16.44■□□□□ 0.22
HMGN1-214ENST00000482733 KRT14P02533 472 aa16.44■□□□□ 0.22
HMGN1-214ENST00000482733 FUCA1P04066 466 aa16.44■□□□□ 0.22
HMGN1-214ENST00000482733 TPH1P17752 444 aa16.44■□□□□ 0.22
HMGN1-214ENST00000482733 ACP1P24666 158 aa16.44■□□□□ 0.22
HMGN1-214ENST00000482733 ZNF140P52738 457 aaPredicted RBP16.44■□□□□ 0.22
HMGN1-214ENST00000482733 BASP1P80723 227 aaKnown RBP16.44■□□□□ 0.22
HMGN1-214ENST00000482733 CDK16Q00536 496 aa16.44■□□□□ 0.22
HMGN1-214ENST00000482733 CHRNA6Q15825 494 aa16.44■□□□□ 0.22
HMGN1-214ENST00000482733 ATP13A5Q4VNC0 1218 aa16.44■□□□□ 0.22
HMGN1-214ENST00000482733 TTC27Q6P3X3 843 aa16.44■□□□□ 0.22
HMGN1-214ENST00000482733 OR52K1Q8NGK4 314 aa16.44■□□□□ 0.22
HMGN1-214ENST00000482733 GPBAR1Q8TDU6 330 aa16.44■□□□□ 0.22
HMGN1-214ENST00000482733 OR2M4Q96R27 311 aa16.44■□□□□ 0.22
HMGN1-214ENST00000482733 CASS4Q9NQ75 786 aa16.44■□□□□ 0.22
HMGN1-214ENST00000482733 SMOXQ9NWM0 555 aa16.44■□□□□ 0.22
HMGN1-214ENST00000482733 TOR4AQ9NXH8 423 aa16.44■□□□□ 0.22
HMGN1-214ENST00000482733 GPSM3Q9Y4H4 160 aa16.44■□□□□ 0.22
HMGN1-214ENST00000482733 OAS3Q9Y6K5 1087 aaKnown RBP16.44■□□□□ 0.22
HMGN1-214ENST00000482733 CNOT1A5YKK6 2376 aaKnown RBP16.44■□□□□ 0.22
HMGN1-214ENST00000482733 VEGFDO43915 354 aa16.43■□□□□ 0.22
HMGN1-214ENST00000482733 NUAK1O60285 661 aa16.43■□□□□ 0.22
HMGN1-214ENST00000482733 DNAJC6O75061 913 aa16.43■□□□□ 0.22
HMGN1-214ENST00000482733 RFPL3O75679 317 aa16.43■□□□□ 0.22
HMGN1-214ENST00000482733 CELA2BP08218 269 aaPredicted RBP16.43■□□□□ 0.22
HMGN1-214ENST00000482733 TPSB2P20231 275 aa16.43■□□□□ 0.22
HMGN1-214ENST00000482733 ADCY8P40145 1251 aa16.43■□□□□ 0.22
HMGN1-214ENST00000482733 PAFAH1B1P43034 410 aa16.43■□□□□ 0.22
HMGN1-214ENST00000482733 ACADVLP49748 655 aa16.43■□□□□ 0.22
HMGN1-214ENST00000482733 ETF1P62495 437 aaKnown RBP16.43■□□□□ 0.22
HMGN1-214ENST00000482733 DNAJC3Q13217 504 aa16.43■□□□□ 0.22
HMGN1-214ENST00000482733 POU6F1Q14863 301 aa16.43■□□□□ 0.22
HMGN1-214ENST00000482733 NR0B2Q15466 257 aa16.43■□□□□ 0.22
HMGN1-214ENST00000482733 TPSAB1Q15661 275 aa16.43■□□□□ 0.22
HMGN1-214ENST00000482733 PYCR3Q53H96 274 aa16.43■□□□□ 0.22
HMGN1-214ENST00000482733 LDLRAP1Q5SW96 308 aa16.43■□□□□ 0.22
HMGN1-214ENST00000482733 FAM151BQ6UXP7 276 aa16.43■□□□□ 0.22
HMGN1-214ENST00000482733 MARK2Q7KZI7 788 aaKnown RBP16.43■□□□□ 0.22
HMGN1-214ENST00000482733 SLCO6A1Q86UG4 719 aa16.43■□□□□ 0.22
HMGN1-214ENST00000482733 CREG2Q8IUH2 290 aa16.43■□□□□ 0.22
HMGN1-214ENST00000482733 ARL10Q8N8L6 244 aa16.43■□□□□ 0.22
HMGN1-214ENST00000482733 ZNF398Q8TD17 642 aa16.43■□□□□ 0.22
HMGN1-214ENST00000482733 STYXQ8WUJ0 223 aa16.43■□□□□ 0.22
HMGN1-214ENST00000482733 ADAMTS14Q8WXS8 1223 aa16.43■□□□□ 0.22
HMGN1-214ENST00000482733 RUNDC3BQ96NL0 473 aa16.43■□□□□ 0.22
HMGN1-214ENST00000482733 ZCCHC2Q9C0B9 1178 aaKnown RBP16.43■□□□□ 0.22
HMGN1-214ENST00000482733 SUDS3Q9H7L9 328 aaPredicted RBP16.43■□□□□ 0.22
HMGN1-214ENST00000482733 ATXN10Q9UBB4 475 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms