RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 HOXD12P35452 270 aa19.8■□□□□ 0.76
TRAPPC12-220ENST00000482645 PDE1CQ14123 709 aaPredicted RBP19.8■□□□□ 0.76
TRAPPC12-220ENST00000482645 SMAD1Q15797 465 aaKnown RBP19.8■□□□□ 0.76
TRAPPC12-220ENST00000482645 CHRNA6Q15825 494 aa19.8■□□□□ 0.76
TRAPPC12-220ENST00000482645 KYNUQ16719 465 aa19.8■□□□□ 0.76
TRAPPC12-220ENST00000482645 DUOXA1Q1HG43 343 aa19.8■□□□□ 0.76
TRAPPC12-220ENST00000482645 BEND6Q5SZJ8 279 aaPredicted RBP19.8■□□□□ 0.76
TRAPPC12-220ENST00000482645 PEAR1Q5VY43 1037 aaPredicted RBP19.8■□□□□ 0.76
TRAPPC12-220ENST00000482645 NLRP9Q7RTR0 991 aa19.8■□□□□ 0.76
TRAPPC12-220ENST00000482645 ABI3BPQ7Z7G0 1075 aa19.8■□□□□ 0.76
TRAPPC12-220ENST00000482645 MFSD2AQ8NA29 543 aa19.8■□□□□ 0.76
TRAPPC12-220ENST00000482645 ZNF669Q96BR6 464 aaPredicted RBP19.8■□□□□ 0.76
TRAPPC12-220ENST00000482645 TBATAQ96M53 351 aa19.8■□□□□ 0.76
TRAPPC12-220ENST00000482645 ZSCAN5AQ9BUG6 496 aa19.8■□□□□ 0.76
TRAPPC12-220ENST00000482645 APOOQ9BUR5 198 aa19.8■□□□□ 0.76
TRAPPC12-220ENST00000482645 CDH19Q9H159 772 aa19.8■□□□□ 0.76
TRAPPC12-220ENST00000482645 VPS37BQ9H9H4 285 aa19.8■□□□□ 0.76
TRAPPC12-220ENST00000482645 SOX13Q9UN79 622 aa19.8■□□□□ 0.76
TRAPPC12-220ENST00000482645 A0A1W2PR77 199 aa19.79■□□□□ 0.76
TRAPPC12-220ENST00000482645 DYNC1I1O14576 645 aa19.79■□□□□ 0.76
TRAPPC12-220ENST00000482645 MC4RP32245 332 aa19.79■□□□□ 0.76
TRAPPC12-220ENST00000482645 RABIFP47224 123 aa19.79■□□□□ 0.76
TRAPPC12-220ENST00000482645 ARSDP51689 593 aa19.79■□□□□ 0.76
TRAPPC12-220ENST00000482645 THOP1P52888 689 aa19.79■□□□□ 0.76
TRAPPC12-220ENST00000482645 PFN3P60673 137 aa19.79■□□□□ 0.76
TRAPPC12-220ENST00000482645 PRAMEP78395 509 aa19.79■□□□□ 0.76
TRAPPC12-220ENST00000482645 TCEAL6Q6IPX3 200 aa19.79■□□□□ 0.76
TRAPPC12-220ENST00000482645 TRMT10CQ7L0Y3 403 aaKnown RBP19.79■□□□□ 0.76
TRAPPC12-220ENST00000482645 RABEPKQ7Z6M1 372 aa19.79■□□□□ 0.76
TRAPPC12-220ENST00000482645 TRIM74Q86UV6 250 aa19.79■□□□□ 0.76
TRAPPC12-220ENST00000482645 PALM2Q8IXS6 379 aa19.79■□□□□ 0.76
TRAPPC12-220ENST00000482645 TRAM1L1Q8N609 369 aa19.79■□□□□ 0.76
TRAPPC12-220ENST00000482645 OR13J1Q8NGT2 312 aa19.79■□□□□ 0.76
TRAPPC12-220ENST00000482645 CEP76Q8TAP6 659 aa19.79■□□□□ 0.76
TRAPPC12-220ENST00000482645 ANKRD7Q92527 254 aa19.79■□□□□ 0.76
TRAPPC12-220ENST00000482645 TCEAL3Q969E4 200 aa19.79■□□□□ 0.76
TRAPPC12-220ENST00000482645 SKA1Q96BD8 255 aa19.79■□□□□ 0.76
TRAPPC12-220ENST00000482645 MFSD3Q96ES6 412 aa19.79■□□□□ 0.76
TRAPPC12-220ENST00000482645 TTC25Q96NG3 672 aa19.79■□□□□ 0.76
TRAPPC12-220ENST00000482645 KIFC1Q9BW19 673 aa19.79■□□□□ 0.76
TRAPPC12-220ENST00000482645 RPS6KL1Q9Y6S9 549 aa19.79■□□□□ 0.76
TRAPPC12-220ENST00000482645 OR51F1A6NGY5 319 aa19.78■□□□□ 0.76
TRAPPC12-220ENST00000482645 TLR4O00206 839 aa19.78■□□□□ 0.76
TRAPPC12-220ENST00000482645 CACNB4O00305 520 aaPredicted RBP19.78■□□□□ 0.76
TRAPPC12-220ENST00000482645 UGT1A9O60656 530 aa19.78■□□□□ 0.76
TRAPPC12-220ENST00000482645 UGT1A6P19224 532 aa19.78■□□□□ 0.76
TRAPPC12-220ENST00000482645 UGT1A1P22309 533 aa19.78■□□□□ 0.76
TRAPPC12-220ENST00000482645 UGT1A4P22310 534 aa19.78■□□□□ 0.76
TRAPPC12-220ENST00000482645 UGT1A3P35503 534 aa19.78■□□□□ 0.76
TRAPPC12-220ENST00000482645 UGT1A5P35504 534 aa19.78■□□□□ 0.76
TRAPPC12-220ENST00000482645 SPEM2Q0P670 501 aa19.78■□□□□ 0.76
TRAPPC12-220ENST00000482645 CBLBQ13191 982 aa19.78■□□□□ 0.76
TRAPPC12-220ENST00000482645 ATP13A5Q4VNC0 1218 aa19.78■□□□□ 0.76
TRAPPC12-220ENST00000482645 UNC5AQ6ZN44 842 aa19.78■□□□□ 0.76
TRAPPC12-220ENST00000482645 SLC22A18ASQ8N1D0 253 aa19.78■□□□□ 0.76
TRAPPC12-220ENST00000482645 MREGQ8N565 214 aa19.78■□□□□ 0.76
TRAPPC12-220ENST00000482645 OR6P1Q8NGX9 317 aa19.78■□□□□ 0.76
TRAPPC12-220ENST00000482645 PTCD2Q8WV60 388 aaKnown RBP19.78■□□□□ 0.76
TRAPPC12-220ENST00000482645 HDAC10Q969S8 669 aa19.78■□□□□ 0.76
TRAPPC12-220ENST00000482645 FUBP1Q96AE4 644 aaKnown RBP19.78■□□□□ 0.76
TRAPPC12-220ENST00000482645 CDKN2AIPNLQ96HQ2 116 aa19.78■□□□□ 0.76
TRAPPC12-220ENST00000482645 NAT9Q9BTE0 207 aa19.78■□□□□ 0.76
TRAPPC12-220ENST00000482645 LGR4Q9BXB1 951 aa19.78■□□□□ 0.76
TRAPPC12-220ENST00000482645 FAM96AQ9H5X1 160 aa19.78■□□□□ 0.76
TRAPPC12-220ENST00000482645 UGT1A7Q9HAW7 530 aa19.78■□□□□ 0.76
TRAPPC12-220ENST00000482645 UGT1A10Q9HAW8 530 aa19.78■□□□□ 0.76
TRAPPC12-220ENST00000482645 UGT1A8Q9HAW9 530 aa19.78■□□□□ 0.76
TRAPPC12-220ENST00000482645 LRRC4CQ9HCJ2 640 aa19.78■□□□□ 0.76
TRAPPC12-220ENST00000482645 NFKBIL1Q9UBC1 381 aaPredicted RBP19.78■□□□□ 0.76
TRAPPC12-220ENST00000482645 APPL1Q9UKG1 709 aa19.78■□□□□ 0.76
TRAPPC12-220ENST00000482645 SLC30A1Q9Y6M5 507 aa19.78■□□□□ 0.76
TRAPPC12-220ENST00000482645 KNL1Q8NG31 2342 aa19.78■□□□□ 0.76
TRAPPC12-220ENST00000482645 GAPDHSO14556 408 aaPredicted RBP19.77■□□□□ 0.76
TRAPPC12-220ENST00000482645 VILLO15195 856 aa19.77■□□□□ 0.76
TRAPPC12-220ENST00000482645 RIPK2O43353 540 aa19.77■□□□□ 0.76
TRAPPC12-220ENST00000482645 SRP72O76094 671 aaKnown RBP19.77■□□□□ 0.76
TRAPPC12-220ENST00000482645 PYGLP06737 847 aa19.77■□□□□ 0.76
TRAPPC12-220ENST00000482645 SSTR1P30872 391 aa19.77■□□□□ 0.76
TRAPPC12-220ENST00000482645 HSD17B3P37058 310 aa19.77■□□□□ 0.76
TRAPPC12-220ENST00000482645 GPX6P59796 221 aa19.77■□□□□ 0.76
TRAPPC12-220ENST00000482645 CDK3Q00526 305 aa19.77■□□□□ 0.76
TRAPPC12-220ENST00000482645 PEX6Q13608 980 aa19.77■□□□□ 0.76
TRAPPC12-220ENST00000482645 CRYMQ14894 314 aa19.77■□□□□ 0.76
TRAPPC12-220ENST00000482645 UAP1Q16222 522 aaPredicted RBP19.77■□□□□ 0.76
TRAPPC12-220ENST00000482645 ZRANB3Q5FWF4 1079 aa19.77■□□□□ 0.76
TRAPPC12-220ENST00000482645 TPRG1LQ5T0D9 272 aa19.77■□□□□ 0.76
TRAPPC12-220ENST00000482645 DOK6Q6PKX4 331 aa19.77■□□□□ 0.76
TRAPPC12-220ENST00000482645 IQCHQ86VS3 1027 aa19.77■□□□□ 0.76
TRAPPC12-220ENST00000482645 NLRP8Q86W28 1048 aa19.77■□□□□ 0.76
TRAPPC12-220ENST00000482645 CCNJLQ8IV13 435 aa19.77■□□□□ 0.76
TRAPPC12-220ENST00000482645 UHMK1Q8TAS1 419 aaKnown RBP19.77■□□□□ 0.76
TRAPPC12-220ENST00000482645 GDAP1Q8TB36 358 aa19.77■□□□□ 0.76
TRAPPC12-220ENST00000482645 ASB8Q9H765 288 aa19.77■□□□□ 0.76
TRAPPC12-220ENST00000482645 MRM3Q9HC36 420 aaKnown RBP19.77■□□□□ 0.76
TRAPPC12-220ENST00000482645 PHPT1Q9NRX4 125 aaPredicted RBP19.77■□□□□ 0.76
TRAPPC12-220ENST00000482645 ANKRD6Q9Y2G4 727 aa19.77■□□□□ 0.76
TRAPPC12-220ENST00000482645 FAM237BA0A1B0GVD1 139 aa19.76■□□□□ 0.75
TRAPPC12-220ENST00000482645 MAGEB16A2A368 324 aa19.76■□□□□ 0.75
TRAPPC12-220ENST00000482645 CCDC162PA2VCL2 907 aa19.76■□□□□ 0.75
TRAPPC12-220ENST00000482645 MAGEC1O60732 1142 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms