RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 CDC25AP30304 524 aa5.67□□□□□ -1.5
SF3B1-210ENST00000482158 EIF2DP41214 584 aaKnown RBP5.67□□□□□ -1.5
SF3B1-210ENST00000482158 GPR143P51810 404 aa5.67□□□□□ -1.5
SF3B1-210ENST00000482158 MRPL12P52815 198 aaKnown RBP5.67□□□□□ -1.5
SF3B1-210ENST00000482158 SEC61BP60468 96 aaKnown RBP5.67□□□□□ -1.5
SF3B1-210ENST00000482158 SREBF2Q12772 1141 aa5.67□□□□□ -1.5
SF3B1-210ENST00000482158 CDC16Q13042 620 aa5.67□□□□□ -1.5
SF3B1-210ENST00000482158 GAGE1Q13065 139 aa5.67□□□□□ -1.5
SF3B1-210ENST00000482158 GAGE4Q13068 117 aa5.67□□□□□ -1.5
SF3B1-210ENST00000482158 PLCB4Q15147 1175 aa5.67□□□□□ -1.5
SF3B1-210ENST00000482158 OASLQ15646 514 aaKnown RBP5.67□□□□□ -1.5
SF3B1-210ENST00000482158 XKR9Q5GH70 373 aa5.67□□□□□ -1.5
SF3B1-210ENST00000482158 HIST3H2AQ7L7L0 130 aa5.67□□□□□ -1.5
SF3B1-210ENST00000482158 ATG9AQ7Z3C6 839 aa5.67□□□□□ -1.5
SF3B1-210ENST00000482158 AACSQ86V21 672 aa5.67□□□□□ -1.5
SF3B1-210ENST00000482158 FBXL14Q8N1E6 418 aa5.67□□□□□ -1.5
SF3B1-210ENST00000482158 HMGCLL1Q8TB92 370 aa5.67□□□□□ -1.5
SF3B1-210ENST00000482158 HM13Q8TCT9 377 aa5.67□□□□□ -1.5
SF3B1-210ENST00000482158 SLC22A18Q96BI1 424 aa5.67□□□□□ -1.5
SF3B1-210ENST00000482158 SERINC2Q96SA4 455 aa5.67□□□□□ -1.5
SF3B1-210ENST00000482158 EPB41L5Q9HCM4 733 aa5.67□□□□□ -1.5
SF3B1-210ENST00000482158 UBA2Q9UBT2 640 aaPredicted RBP5.67□□□□□ -1.5
SF3B1-210ENST00000482158 NRBP1Q9UHY1 535 aa5.67□□□□□ -1.5
SF3B1-210ENST00000482158 SNX9Q9Y5X1 595 aa5.67□□□□□ -1.5
SF3B1-210ENST00000482158 PASKQ96RG2 1323 aa5.67□□□□□ -1.5
SF3B1-210ENST00000482158 SMAD9O15198 467 aaKnown RBP5.66□□□□□ -1.5
SF3B1-210ENST00000482158 STARD3NLO95772 234 aa5.66□□□□□ -1.5
SF3B1-210ENST00000482158 ACAA1P09110 424 aaPredicted RBP5.66□□□□□ -1.5
SF3B1-210ENST00000482158 NR2F1P10589 423 aa5.66□□□□□ -1.5
SF3B1-210ENST00000482158 ACTN1P12814 892 aa5.66□□□□□ -1.5
SF3B1-210ENST00000482158 SRCP12931 536 aa5.66□□□□□ -1.5
SF3B1-210ENST00000482158 FASLGP48023 281 aa5.66□□□□□ -1.5
SF3B1-210ENST00000482158 NRIP1P48552 1158 aa5.66□□□□□ -1.5
SF3B1-210ENST00000482158 MMP14P50281 582 aa5.66□□□□□ -1.5
SF3B1-210ENST00000482158 HTR6P50406 440 aa5.66□□□□□ -1.5
SF3B1-210ENST00000482158 PDLIM4P50479 330 aa5.66□□□□□ -1.5
SF3B1-210ENST00000482158 CTF1Q16619 201 aa5.66□□□□□ -1.5
SF3B1-210ENST00000482158 ATP13A5Q4VNC0 1218 aa5.66□□□□□ -1.5
SF3B1-210ENST00000482158 KBTBD6Q86V97 674 aa5.66□□□□□ -1.5
SF3B1-210ENST00000482158 ZNF34Q8IZ26 560 aa5.66□□□□□ -1.5
SF3B1-210ENST00000482158 OR1J2Q8NGS2 313 aa5.66□□□□□ -1.5
SF3B1-210ENST00000482158 TMED6Q8WW62 240 aa5.66□□□□□ -1.5
SF3B1-210ENST00000482158 HRH4Q9H3N8 390 aa5.66□□□□□ -1.5
SF3B1-210ENST00000482158 OCIAD1Q9NX40 245 aa5.66□□□□□ -1.5
SF3B1-210ENST00000482158 EXO1Q9UQ84 846 aaKnown RBP5.66□□□□□ -1.5
SF3B1-210ENST00000482158 PTRH2Q9Y3E5 179 aaKnown RBP5.66□□□□□ -1.5
SF3B1-210ENST00000482158 KANSL1LA0AUZ9 987 aa5.65□□□□□ -1.5
SF3B1-210ENST00000482158 ADAMDEC1O15204 470 aa5.65□□□□□ -1.5
SF3B1-210ENST00000482158 SPINT2O43291 252 aa5.65□□□□□ -1.5
SF3B1-210ENST00000482158 PLPP2O43688 288 aa5.65□□□□□ -1.5
SF3B1-210ENST00000482158 CLDN14O95500 239 aa5.65□□□□□ -1.5
SF3B1-210ENST00000482158 MMP9P14780 707 aa5.65□□□□□ -1.5
SF3B1-210ENST00000482158 NANOS2P60321 138 aaKnown RBP5.65□□□□□ -1.5
SF3B1-210ENST00000482158 GRSF1Q12849 480 aaKnown RBP eCLIP5.65□□□□□ -1.5
SF3B1-210ENST00000482158 LRMPQ12912 555 aa5.65□□□□□ -1.5
SF3B1-210ENST00000482158 MYBPHQ13203 477 aa5.65□□□□□ -1.5
SF3B1-210ENST00000482158 DLG2Q15700 870 aa5.65□□□□□ -1.5
SF3B1-210ENST00000482158 DCST1Q5T197 706 aa5.65□□□□□ -1.5
SF3B1-210ENST00000482158 BRAT1Q6PJG6 821 aa5.65□□□□□ -1.5
SF3B1-210ENST00000482158 SCYL3Q8IZE3 742 aa5.65□□□□□ -1.5
SF3B1-210ENST00000482158 IQCF1Q8N6M8 205 aa5.65□□□□□ -1.5
SF3B1-210ENST00000482158 LSMEM1Q8N8F7 131 aa5.65□□□□□ -1.5
SF3B1-210ENST00000482158 ACVR1CQ8NER5 493 aa5.65□□□□□ -1.5
SF3B1-210ENST00000482158 ELP5Q8TE02 316 aa5.65□□□□□ -1.5
SF3B1-210ENST00000482158 TAAR8Q969N4 342 aa5.65□□□□□ -1.5
SF3B1-210ENST00000482158 ZNF479Q96JC4 524 aa5.65□□□□□ -1.5
SF3B1-210ENST00000482158 CMKLR1Q99788 373 aa5.65□□□□□ -1.5
SF3B1-210ENST00000482158 NTPCRQ9BSD7 190 aaKnown RBP5.65□□□□□ -1.5
SF3B1-210ENST00000482158 C1QTNF1Q9BXJ1 281 aa5.65□□□□□ -1.5
SF3B1-210ENST00000482158 PCDH9Q9HC56 1237 aa5.65□□□□□ -1.5
SF3B1-210ENST00000482158 STK39Q9UEW8 545 aa5.65□□□□□ -1.5
SF3B1-210ENST00000482158 TNFRSF18Q9Y5U5 241 aa5.65□□□□□ -1.5
SF3B1-210ENST00000482158 FAM90A26D6RGX4 464 aa5.64□□□□□ -1.51
SF3B1-210ENST00000482158 SH2B2O14492 632 aaPredicted RBP5.64□□□□□ -1.51
SF3B1-210ENST00000482158 MAP2K7O14733 419 aa5.64□□□□□ -1.51
SF3B1-210ENST00000482158 MID1O15344 667 aa5.64□□□□□ -1.51
SF3B1-210ENST00000482158 ADAM20O43506 726 aa5.64□□□□□ -1.51
SF3B1-210ENST00000482158 SMAD6O43541 496 aaKnown RBP5.64□□□□□ -1.51
SF3B1-210ENST00000482158 GPC4O75487 556 aa5.64□□□□□ -1.51
SF3B1-210ENST00000482158 RFPL2O75678 378 aa5.64□□□□□ -1.51
SF3B1-210ENST00000482158 KDM4BO94953 1096 aa5.64□□□□□ -1.51
SF3B1-210ENST00000482158 PRSS2P07478 247 aa5.64□□□□□ -1.51
SF3B1-210ENST00000482158 TRIM21P19474 475 aaKnown RBP5.64□□□□□ -1.51
SF3B1-210ENST00000482158 UGT1A1P22309 533 aa5.64□□□□□ -1.51
SF3B1-210ENST00000482158 MSH2P43246 934 aa5.64□□□□□ -1.51
SF3B1-210ENST00000482158 HSD17B4P51659 736 aa5.64□□□□□ -1.51
SF3B1-210ENST00000482158 CLCNKAP51800 687 aa5.64□□□□□ -1.51
SF3B1-210ENST00000482158 POLGP54098 1239 aaPredicted RBP5.64□□□□□ -1.51
SF3B1-210ENST00000482158 TAS2R38P59533 333 aa5.64□□□□□ -1.51
SF3B1-210ENST00000482158 ECT2LQ008S8 904 aa5.64□□□□□ -1.51
SF3B1-210ENST00000482158 EGR4Q05215 589 aa5.64□□□□□ -1.51
SF3B1-210ENST00000482158 LTBQ06643 244 aa5.64□□□□□ -1.51
SF3B1-210ENST00000482158 FOXM1Q08050 763 aa5.64□□□□□ -1.51
SF3B1-210ENST00000482158 ZNF155Q12901 538 aaPredicted RBP5.64□□□□□ -1.51
SF3B1-210ENST00000482158 TRAF2Q12933 501 aa5.64□□□□□ -1.51
SF3B1-210ENST00000482158 CFAP58Q5T655 872 aa5.64□□□□□ -1.51
SF3B1-210ENST00000482158 C18orf63Q68DL7 685 aa5.64□□□□□ -1.51
SF3B1-210ENST00000482158 RHBDF2Q6PJF5 856 aa5.64□□□□□ -1.51
SF3B1-210ENST00000482158 GLCCI1Q86VQ1 547 aa5.64□□□□□ -1.51
SF3B1-210ENST00000482158 OR8H2Q8N162 312 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms