RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 KANSL1LA0AUZ9 987 aa15.28■□□□□ 0.04
C9orf3-218ENST00000482056 LRRC14BA6NHZ5 514 aa15.28■□□□□ 0.04
C9orf3-218ENST00000482056 C2orf81A6NN90 581 aa15.28■□□□□ 0.04
C9orf3-218ENST00000482056 MUSKO15146 869 aa15.28■□□□□ 0.04
C9orf3-218ENST00000482056 B4GALT3O60512 393 aa15.28■□□□□ 0.04
C9orf3-218ENST00000482056 ADAMTS4O75173 837 aa15.28■□□□□ 0.04
C9orf3-218ENST00000482056 GPIP06744 558 aa15.28■□□□□ 0.04
C9orf3-218ENST00000482056 PIRTP0C851 137 aa15.28■□□□□ 0.04
C9orf3-218ENST00000482056 FMO4P31512 558 aa15.28■□□□□ 0.04
C9orf3-218ENST00000482056 MRPL19P49406 292 aaKnown RBP15.28■□□□□ 0.04
C9orf3-218ENST00000482056 RPS6KA3P51812 740 aa15.28■□□□□ 0.04
C9orf3-218ENST00000482056 ZNF140P52738 457 aaPredicted RBP15.28■□□□□ 0.04
C9orf3-218ENST00000482056 FOXA1P55317 472 aa15.28■□□□□ 0.04
C9orf3-218ENST00000482056 PAQR3Q6TCH7 311 aa15.28■□□□□ 0.04
C9orf3-218ENST00000482056 GLT6D1Q7Z4J2 308 aa15.28■□□□□ 0.04
C9orf3-218ENST00000482056 IFNL1Q8IU54 200 aa15.28■□□□□ 0.04
C9orf3-218ENST00000482056 SPPL2CQ8IUH8 684 aa15.28■□□□□ 0.04
C9orf3-218ENST00000482056 LGI2Q8N0V4 545 aa15.28■□□□□ 0.04
C9orf3-218ENST00000482056 MFSD2AQ8NA29 543 aa15.28■□□□□ 0.04
C9orf3-218ENST00000482056 ATAD1Q8NBU5 361 aa15.28■□□□□ 0.04
C9orf3-218ENST00000482056 TNIP2Q8NFZ5 429 aa15.28■□□□□ 0.04
C9orf3-218ENST00000482056 GPR152Q8TDT2 470 aa15.28■□□□□ 0.04
C9orf3-218ENST00000482056 RMDN1Q96DB5 314 aa15.28■□□□□ 0.04
C9orf3-218ENST00000482056 KCNA7Q96RP8 456 aa15.28■□□□□ 0.04
C9orf3-218ENST00000482056 MGME1Q9BQP7 344 aa15.28■□□□□ 0.04
C9orf3-218ENST00000482056 PDFQ9HBH1 243 aa15.28■□□□□ 0.04
C9orf3-218ENST00000482056 BTRCQ9Y297 605 aa15.28■□□□□ 0.04
C9orf3-218ENST00000482056 ARIH1Q9Y4X5 557 aaPredicted RBP15.28■□□□□ 0.04
C9orf3-218ENST00000482056 PTGDR2Q9Y5Y4 395 aa15.28■□□□□ 0.04
C9orf3-218ENST00000482056 GBF1Q92538 1859 aa15.28■□□□□ 0.04
C9orf3-218ENST00000482056 PPP6CO00743 305 aa15.27■□□□□ 0.04
C9orf3-218ENST00000482056 VPS26AO75436 327 aa15.27■□□□□ 0.04
C9orf3-218ENST00000482056 ECI2O75521 394 aa15.27■□□□□ 0.04
C9orf3-218ENST00000482056 RPS17P08708 135 aaKnown RBP15.27■□□□□ 0.04
C9orf3-218ENST00000482056 C7P10643 843 aa15.27■□□□□ 0.04
C9orf3-218ENST00000482056 PLOD1Q02809 727 aaPredicted RBP15.27■□□□□ 0.04
C9orf3-218ENST00000482056 BIRC2Q13490 618 aa15.27■□□□□ 0.04
C9orf3-218ENST00000482056 NFYCQ13952 458 aa15.27■□□□□ 0.04
C9orf3-218ENST00000482056 TAF1AQ15573 450 aaPredicted RBP15.27■□□□□ 0.04
C9orf3-218ENST00000482056 AASDHQ4L235 1098 aaPredicted RBP15.27■□□□□ 0.04
C9orf3-218ENST00000482056 NHSL2Q5HYW2 709 aa15.27■□□□□ 0.04
C9orf3-218ENST00000482056 CLLU1OSQ5K130 101 aa15.27■□□□□ 0.04
C9orf3-218ENST00000482056 IL31Q6EBC2 164 aa15.27■□□□□ 0.04
C9orf3-218ENST00000482056 TRIB2Q92519 343 aa15.27■□□□□ 0.04
C9orf3-218ENST00000482056 SPATA17Q96L03 361 aa15.27■□□□□ 0.04
C9orf3-218ENST00000482056 TRIB3Q96RU7 358 aa15.27■□□□□ 0.04
C9orf3-218ENST00000482056 CDK5RAP1Q96SZ6 601 aaKnown RBP15.27■□□□□ 0.04
C9orf3-218ENST00000482056 TUBB1Q9H4B7 451 aa15.27■□□□□ 0.04
C9orf3-218ENST00000482056 SEMA4BQ9NPR2 832 aaPredicted RBP15.27■□□□□ 0.04
C9orf3-218ENST00000482056 UBA2Q9UBT2 640 aaPredicted RBP15.27■□□□□ 0.04
C9orf3-218ENST00000482056 GIMAP2Q9UG22 337 aa15.27■□□□□ 0.04
C9orf3-218ENST00000482056 RSL24D1Q9UHA3 163 aaKnown RBP15.27■□□□□ 0.04
C9orf3-218ENST00000482056 FRMPD3Q5JV73 1810 aa15.27■□□□□ 0.04
C9orf3-218ENST00000482056 A0A1W2PP18 115 aa15.27■□□□□ 0.03
C9orf3-218ENST00000482056 SAC3D1A6NKF1 404 aa15.27■□□□□ 0.03
C9orf3-218ENST00000482056 SOCS2O14508 198 aa15.27■□□□□ 0.03
C9orf3-218ENST00000482056 SNX2O60749 519 aa15.27■□□□□ 0.03
C9orf3-218ENST00000482056 GJB3O75712 270 aa15.27■□□□□ 0.03
C9orf3-218ENST00000482056 CYBBP04839 570 aa15.27■□□□□ 0.03
C9orf3-218ENST00000482056 UROSP10746 265 aa15.27■□□□□ 0.03
C9orf3-218ENST00000482056 CKMT2P17540 419 aa15.27■□□□□ 0.03
C9orf3-218ENST00000482056 CES1P23141 567 aa15.27■□□□□ 0.03
C9orf3-218ENST00000482056 SLC6A2P23975 617 aa15.27■□□□□ 0.03
C9orf3-218ENST00000482056 GNA12Q03113 381 aa15.27■□□□□ 0.03
C9orf3-218ENST00000482056 CAPRIN1Q14444 709 aaKnown RBP15.27■□□□□ 0.03
C9orf3-218ENST00000482056 LRRC23Q53EV4 343 aaPredicted RBP15.27■□□□□ 0.03
C9orf3-218ENST00000482056 NADSYN1Q6IA69 706 aa15.27■□□□□ 0.03
C9orf3-218ENST00000482056 PCSK9Q8NBP7 692 aaKnown RBP15.27■□□□□ 0.03
C9orf3-218ENST00000482056 TFAP2CQ92754 450 aa15.27■□□□□ 0.03
C9orf3-218ENST00000482056 CENPNQ96H22 339 aaPredicted RBP15.27■□□□□ 0.03
C9orf3-218ENST00000482056 LRCH3Q96II8 777 aa15.27■□□□□ 0.03
C9orf3-218ENST00000482056 C1QTNF3Q9BXJ4 246 aa15.27■□□□□ 0.03
C9orf3-218ENST00000482056 AGPAT4Q9NRZ5 378 aa15.27■□□□□ 0.03
C9orf3-218ENST00000482056 RIC8BQ9NVN3 520 aa15.27■□□□□ 0.03
C9orf3-218ENST00000482056 TMEM45AQ9NWC5 275 aa15.27■□□□□ 0.03
C9orf3-218ENST00000482056 CMTM6Q9NX76 183 aa15.27■□□□□ 0.03
C9orf3-218ENST00000482056 TUBA8Q9NY65 449 aaPredicted RBP15.27■□□□□ 0.03
C9orf3-218ENST00000482056 SUN2Q9UH99 717 aa15.27■□□□□ 0.03
C9orf3-218ENST00000482056 FAM50BQ9Y247 325 aa15.27■□□□□ 0.03
C9orf3-218ENST00000482056 GPR45Q9Y5Y3 372 aa15.27■□□□□ 0.03
C9orf3-218ENST00000482056 CEPT1Q9Y6K0 416 aa15.27■□□□□ 0.03
C9orf3-218ENST00000482056 RNF103-CHMP3A0A140T963 221 aa15.26■□□□□ 0.03
C9orf3-218ENST00000482056 FXYD1O00168 92 aa15.26■□□□□ 0.03
C9orf3-218ENST00000482056 ARPC2O15144 300 aa15.26■□□□□ 0.03
C9orf3-218ENST00000482056 BMP10O95393 424 aa15.26■□□□□ 0.03
C9orf3-218ENST00000482056 ESRRBO95718 433 aa15.26■□□□□ 0.03
C9orf3-218ENST00000482056 ALDH3B2P48448 385 aa15.26■□□□□ 0.03
C9orf3-218ENST00000482056 OXCT1P55809 520 aa15.26■□□□□ 0.03
C9orf3-218ENST00000482056 FCGRTP55899 365 aa15.26■□□□□ 0.03
C9orf3-218ENST00000482056 ARPP19P56211 112 aa15.26■□□□□ 0.03
C9orf3-218ENST00000482056 INHBEP58166 350 aa15.26■□□□□ 0.03
C9orf3-218ENST00000482056 ESRRGP62508 458 aa15.26■□□□□ 0.03
C9orf3-218ENST00000482056 TSNQ15631 228 aaKnown RBP15.26■□□□□ 0.03
C9orf3-218ENST00000482056 RBBP7Q16576 425 aa15.26■□□□□ 0.03
C9orf3-218ENST00000482056 TRIM71Q2Q1W2 868 aaKnown RBP15.26■□□□□ 0.03
C9orf3-218ENST00000482056 KCTD21Q4G0X4 260 aa15.26■□□□□ 0.03
C9orf3-218ENST00000482056 CBR4Q8N4T8 237 aa15.26■□□□□ 0.03
C9orf3-218ENST00000482056 OR4K2Q8NGD2 314 aa15.26■□□□□ 0.03
C9orf3-218ENST00000482056 OR56A4Q8NGH8 313 aa15.26■□□□□ 0.03
C9orf3-218ENST00000482056 MYRFLQ96LU7 910 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms