RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 FFAR2O15552 330 aa10.52□□□□□ -0.73
SSBP1-210ENST00000481508 MAGEC1O60732 1142 aa10.52□□□□□ -0.73
SSBP1-210ENST00000481508 AP2A1O95782 977 aa10.52□□□□□ -0.73
SSBP1-210ENST00000481508 MYF5P13349 255 aa10.52□□□□□ -0.73
SSBP1-210ENST00000481508 TSHRP16473 764 aa10.52□□□□□ -0.73
SSBP1-210ENST00000481508 JUNDP17535 347 aa10.52□□□□□ -0.73
SSBP1-210ENST00000481508 DGKAP23743 735 aa10.52□□□□□ -0.73
SSBP1-210ENST00000481508 NFKBIAP25963 317 aa10.52□□□□□ -0.73
SSBP1-210ENST00000481508 STIP1P31948 543 aaKnown RBP10.52□□□□□ -0.73
SSBP1-210ENST00000481508 GPR1P46091 355 aa10.52□□□□□ -0.73
SSBP1-210ENST00000481508 POLD2P49005 469 aa10.52□□□□□ -0.73
SSBP1-210ENST00000481508 TERF1P54274 439 aa10.52□□□□□ -0.73
SSBP1-210ENST00000481508 DPTQ07507 201 aa10.52□□□□□ -0.73
SSBP1-210ENST00000481508 SLC14A1Q13336 389 aa10.52□□□□□ -0.73
SSBP1-210ENST00000481508 C1orf61Q13536 156 aa10.52□□□□□ -0.73
SSBP1-210ENST00000481508 C6orf132Q5T0Z8 1188 aa10.52□□□□□ -0.73
SSBP1-210ENST00000481508 DOK6Q6PKX4 331 aa10.52□□□□□ -0.73
SSBP1-210ENST00000481508 ADAMTSL4Q6UY14 1074 aa10.52□□□□□ -0.73
SSBP1-210ENST00000481508 ZNF765Q7L2R6 523 aa10.52□□□□□ -0.73
SSBP1-210ENST00000481508 GLT6D1Q7Z4J2 308 aa10.52□□□□□ -0.73
SSBP1-210ENST00000481508 DCP2Q8IU60 420 aaKnown RBP10.52□□□□□ -0.73
SSBP1-210ENST00000481508 NRSN1Q8IZ57 195 aa10.52□□□□□ -0.73
SSBP1-210ENST00000481508 EID2Q8N6I1 236 aa10.52□□□□□ -0.73
SSBP1-210ENST00000481508 ZNF548Q8NEK5 533 aaPredicted RBP10.52□□□□□ -0.73
SSBP1-210ENST00000481508 OR52K1Q8NGK4 314 aa10.52□□□□□ -0.73
SSBP1-210ENST00000481508 FAM174AQ8TBP5 190 aa10.52□□□□□ -0.73
SSBP1-210ENST00000481508 SETD7Q8WTS6 366 aaKnown RBP10.52□□□□□ -0.73
SSBP1-210ENST00000481508 MAIP1Q8WWC4 291 aa10.52□□□□□ -0.73
SSBP1-210ENST00000481508 MAGOHBQ96A72 148 aaKnown RBP10.52□□□□□ -0.73
SSBP1-210ENST00000481508 WDR92Q96MX6 357 aa10.52□□□□□ -0.73
SSBP1-210ENST00000481508 FERMT1Q9BQL6 677 aa10.52□□□□□ -0.73
SSBP1-210ENST00000481508 LRRC61Q9BV99 259 aa10.52□□□□□ -0.73
SSBP1-210ENST00000481508 FRMD8Q9BZ67 464 aaPredicted RBP10.52□□□□□ -0.73
SSBP1-210ENST00000481508 CLPBQ9H078 707 aa10.52□□□□□ -0.73
SSBP1-210ENST00000481508 FAM83DQ9H4H8 585 aa10.52□□□□□ -0.73
SSBP1-210ENST00000481508 WDR26Q9H7D7 661 aa10.52□□□□□ -0.73
SSBP1-210ENST00000481508 SUDS3Q9H7L9 328 aaPredicted RBP10.52□□□□□ -0.73
SSBP1-210ENST00000481508 ARNT2Q9HBZ2 717 aa10.52□□□□□ -0.73
SSBP1-210ENST00000481508 ARFGAP3Q9NP61 516 aa10.52□□□□□ -0.73
SSBP1-210ENST00000481508 RAB6BQ9NRW1 208 aa10.52□□□□□ -0.73
SSBP1-210ENST00000481508 IL17CQ9P0M4 197 aa10.52□□□□□ -0.73
SSBP1-210ENST00000481508 TMEM98Q9Y2Y6 226 aa10.52□□□□□ -0.73
SSBP1-210ENST00000481508 AAR2Q9Y312 384 aaKnown RBP10.52□□□□□ -0.73
SSBP1-210ENST00000481508 NEU2Q9Y3R4 380 aa10.52□□□□□ -0.73
SSBP1-210ENST00000481508 COL27A1Q8IZC6 1860 aaPredicted RBP10.52□□□□□ -0.73
SSBP1-210ENST00000481508 URB1O60287 2271 aaKnown RBP10.52□□□□□ -0.73
SSBP1-210ENST00000481508 GOLGA4Q13439 2230 aaKnown RBP10.52□□□□□ -0.73
SSBP1-210ENST00000481508 TCRBV7S3A2A0A539 114 aa10.51□□□□□ -0.73
SSBP1-210ENST00000481508 CCDC78A2IDD5 438 aa10.51□□□□□ -0.73
SSBP1-210ENST00000481508 CACNB4O00305 520 aaPredicted RBP10.51□□□□□ -0.73
SSBP1-210ENST00000481508 TOR1BO14657 336 aa10.51□□□□□ -0.73
SSBP1-210ENST00000481508 DFNA5O60443 496 aa10.51□□□□□ -0.73
SSBP1-210ENST00000481508 PHF2O75151 1096 aa10.51□□□□□ -0.73
SSBP1-210ENST00000481508 CEACAM5P06731 702 aa10.51□□□□□ -0.73
SSBP1-210ENST00000481508 MYCLP1P12525 358 aaPredicted RBP10.51□□□□□ -0.73
SSBP1-210ENST00000481508 TCP1P17987 556 aaKnown RBP10.51□□□□□ -0.73
SSBP1-210ENST00000481508 CSRP1P21291 193 aaKnown RBP10.51□□□□□ -0.73
SSBP1-210ENST00000481508 MSNP26038 577 aaKnown RBP10.51□□□□□ -0.73
SSBP1-210ENST00000481508 TEAD1P28347 426 aa10.51□□□□□ -0.73
SSBP1-210ENST00000481508 FDFT1P37268 417 aa10.51□□□□□ -0.73
SSBP1-210ENST00000481508 COILP38432 576 aaPredicted RBP10.51□□□□□ -0.73
SSBP1-210ENST00000481508 ARRB1P49407 418 aaPredicted RBP10.51□□□□□ -0.73
SSBP1-210ENST00000481508 VPS41P49754 854 aa10.51□□□□□ -0.73
SSBP1-210ENST00000481508 ZNF140P52738 457 aaPredicted RBP10.51□□□□□ -0.73
SSBP1-210ENST00000481508 DCDC1P59894 354 aa10.51□□□□□ -0.73
SSBP1-210ENST00000481508 SRP54P61011 504 aaKnown RBP10.51□□□□□ -0.73
SSBP1-210ENST00000481508 PPARDQ03181 441 aa10.51□□□□□ -0.73
SSBP1-210ENST00000481508 SEMA5AQ13591 1074 aa10.51□□□□□ -0.73
SSBP1-210ENST00000481508 PROX2Q3B8N5 592 aa10.51□□□□□ -0.73
SSBP1-210ENST00000481508 KHDC1Q4VXA5 237 aaKnown RBP10.51□□□□□ -0.73
SSBP1-210ENST00000481508 CCDC70Q6NSX1 233 aa10.51□□□□□ -0.73
SSBP1-210ENST00000481508 SYT10Q6XYQ8 523 aa10.51□□□□□ -0.73
SSBP1-210ENST00000481508 ZNF534Q76KX8 674 aa10.51□□□□□ -0.73
SSBP1-210ENST00000481508 RD3Q7Z3Z2 195 aa10.51□□□□□ -0.73
SSBP1-210ENST00000481508 LURAP1LQ8IV03 231 aa10.51□□□□□ -0.73
SSBP1-210ENST00000481508 HID1Q8IV36 788 aa10.51□□□□□ -0.73
SSBP1-210ENST00000481508 SFTPA2Q8IWL1 248 aa10.51□□□□□ -0.73
SSBP1-210ENST00000481508 OXR1Q8N573 874 aa10.51□□□□□ -0.73
SSBP1-210ENST00000481508 CCDC89Q8N998 374 aa10.51□□□□□ -0.73
SSBP1-210ENST00000481508 OR56A4Q8NGH8 313 aa10.51□□□□□ -0.73
SSBP1-210ENST00000481508 OR13C4Q8NGS5 318 aa10.51□□□□□ -0.73
SSBP1-210ENST00000481508 CCL4L1Q8NHW4 92 aa10.51□□□□□ -0.73
SSBP1-210ENST00000481508 CCHCR1Q8TD31 782 aa10.51□□□□□ -0.73
SSBP1-210ENST00000481508 LMX1AQ8TE12 382 aa10.51□□□□□ -0.73
SSBP1-210ENST00000481508 CCDC97Q96F63 343 aaPredicted RBP10.51□□□□□ -0.73
SSBP1-210ENST00000481508 COX14Q96I36 57 aa10.51□□□□□ -0.73
SSBP1-210ENST00000481508 SPATA16Q9BXB7 569 aa10.51□□□□□ -0.73
SSBP1-210ENST00000481508 DDX47Q9H0S4 455 aaKnown RBP10.51□□□□□ -0.73
SSBP1-210ENST00000481508 LRRC40Q9H9A6 602 aa10.51□□□□□ -0.73
SSBP1-210ENST00000481508 PKD2L2Q9NZM6 624 aa10.51□□□□□ -0.73
SSBP1-210ENST00000481508 PAK5Q9P286 719 aa10.51□□□□□ -0.73
SSBP1-210ENST00000481508 NFKBIL1Q9UBC1 381 aaPredicted RBP10.51□□□□□ -0.73
SSBP1-210ENST00000481508 KLQ9UEF7 1012 aa10.51□□□□□ -0.73
SSBP1-210ENST00000481508 APOBEC3BQ9UH17 382 aaKnown RBP10.51□□□□□ -0.73
SSBP1-210ENST00000481508 PLEKHM1Q9Y4G2 1056 aa10.51□□□□□ -0.73
SSBP1-210ENST00000481508 ST14Q9Y5Y6 855 aa10.51□□□□□ -0.73
SSBP1-210ENST00000481508 LY6G6EA0A0G2JKS1 128 aa10.5□□□□□ -0.73
SSBP1-210ENST00000481508 PRSS38A1L453 326 aa10.5□□□□□ -0.73
SSBP1-210ENST00000481508 CTAGE9A4FU28 777 aa10.5□□□□□ -0.73
SSBP1-210ENST00000481508 YKT6O15498 198 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms