RNA–Protein interactions for RNA: ENST00000479544.6

USP42-206, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 1 (best)

Gene USP42, Length 4,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-206ENST00000479544 GNG14A0A1W2PPG7 69 aa13.46□□□□□ -0.25
USP42-206ENST00000479544 C5orf58C9J3I9 102 aa13.46□□□□□ -0.25
USP42-206ENST00000479544 LOC110117498-PIK3R3F6TDL0 507 aa13.46□□□□□ -0.25
USP42-206ENST00000479544 H3BN98 237 aa13.46□□□□□ -0.25
USP42-206ENST00000479544 AURKAO14965 403 aa13.46□□□□□ -0.25
USP42-206ENST00000479544 LGALS2P05162 132 aa13.46□□□□□ -0.25
USP42-206ENST00000479544 CNPP09543 421 aaKnown RBP13.46□□□□□ -0.25
USP42-206ENST00000479544 BMXP51813 675 aa13.46□□□□□ -0.25
USP42-206ENST00000479544 PIGGQ5H8A4 983 aa13.46□□□□□ -0.25
USP42-206ENST00000479544 GPRIN3Q6ZVF9 776 aa13.46□□□□□ -0.25
USP42-206ENST00000479544 ERMP1Q7Z2K6 904 aa13.46□□□□□ -0.25
USP42-206ENST00000479544 R3HCC1LQ7Z5L2 792 aaKnown RBP13.46□□□□□ -0.25
USP42-206ENST00000479544 CATSPERZQ9NTU4 200 aa13.46□□□□□ -0.25
USP42-206ENST00000479544 C7orf72A4D263 438 aa13.46□□□□□ -0.26
USP42-206ENST00000479544 hCG_2039718K7EN88 272 aa13.46□□□□□ -0.26
USP42-206ENST00000479544 NFKBIEO00221 500 aa13.46□□□□□ -0.26
USP42-206ENST00000479544 GABBR2O75899 941 aa13.46□□□□□ -0.26
USP42-206ENST00000479544 CLPXO76031 633 aa13.46□□□□□ -0.26
USP42-206ENST00000479544 FBXO21O94952 628 aa13.46□□□□□ -0.26
USP42-206ENST00000479544 PRKCGP05129 697 aa13.46□□□□□ -0.26
USP42-206ENST00000479544 DGKEP52429 567 aa13.46□□□□□ -0.26
USP42-206ENST00000479544 THOC7Q6I9Y2 204 aaKnown RBP13.46□□□□□ -0.26
USP42-206ENST00000479544 DENND5AQ6IQ26 1287 aa13.46□□□□□ -0.26
USP42-206ENST00000479544 CATSPERGQ6ZRH7 1159 aa13.46□□□□□ -0.26
USP42-206ENST00000479544 GLT6D1Q7Z4J2 308 aa13.46□□□□□ -0.26
USP42-206ENST00000479544 C2orf69Q8N8R5 385 aa13.46□□□□□ -0.26
USP42-206ENST00000479544 OR52J3Q8NH60 311 aa13.46□□□□□ -0.26
USP42-206ENST00000479544 TMBIM1Q969X1 311 aa13.46□□□□□ -0.26
USP42-206ENST00000479544 LRRC58Q96CX6 371 aa13.46□□□□□ -0.26
USP42-206ENST00000479544 SLC47A1Q96FL8 570 aa13.46□□□□□ -0.26
USP42-206ENST00000479544 OR52E6Q96RD3 313 aa13.46□□□□□ -0.26
USP42-206ENST00000479544 WDR83Q9BRX9 315 aaKnown RBP13.46□□□□□ -0.26
USP42-206ENST00000479544 RHOBTB2Q9BYZ6 727 aa13.46□□□□□ -0.26
USP42-206ENST00000479544 ABCB9Q9NP78 766 aa13.46□□□□□ -0.26
USP42-206ENST00000479544 PIGVQ9NUD9 493 aa13.46□□□□□ -0.26
USP42-206ENST00000479544 FAIMQ9NVQ4 179 aa13.46□□□□□ -0.26
USP42-206ENST00000479544 MOCS1Q9NZB8 636 aa13.46□□□□□ -0.26
USP42-206ENST00000479544 EP400Q96L91 3159 aa13.45□□□□□ -0.26
USP42-206ENST00000479544 PIPSLA2A3N6 862 aa13.45□□□□□ -0.26
USP42-206ENST00000479544 PLOD2O00469 737 aa13.45□□□□□ -0.26
USP42-206ENST00000479544 SDHDO14521 159 aa13.45□□□□□ -0.26
USP42-206ENST00000479544 PORP16435 677 aaPredicted RBP13.45□□□□□ -0.26
USP42-206ENST00000479544 TUFMP49411 452 aaKnown RBP13.45□□□□□ -0.26
USP42-206ENST00000479544 IL2P60568 153 aa13.45□□□□□ -0.26
USP42-206ENST00000479544 TSNQ15631 228 aaKnown RBP13.45□□□□□ -0.26
USP42-206ENST00000479544 DET1Q7L5Y6 550 aa13.45□□□□□ -0.26
USP42-206ENST00000479544 CLIP4Q8N3C7 705 aa13.45□□□□□ -0.26
USP42-206ENST00000479544 SCAIQ8N9R8 606 aa13.45□□□□□ -0.26
USP42-206ENST00000479544 ACVR1CQ8NER5 493 aa13.45□□□□□ -0.26
USP42-206ENST00000479544 TRPV3Q8NET8 790 aa13.45□□□□□ -0.26
USP42-206ENST00000479544 HEPHQ9BQS7 1158 aa13.45□□□□□ -0.26
USP42-206ENST00000479544 CNTN3Q9P232 1028 aa13.45□□□□□ -0.26
USP42-206ENST00000479544 LRRC14BA6NHZ5 514 aa13.45□□□□□ -0.26
USP42-206ENST00000479544 OR4F21O95013 312 aa13.45□□□□□ -0.26
USP42-206ENST00000479544 THP07101 528 aa13.45□□□□□ -0.26
USP42-206ENST00000479544 MXD1Q05195 221 aa13.45□□□□□ -0.26
USP42-206ENST00000479544 MOGQ16653 247 aa13.45□□□□□ -0.26
USP42-206ENST00000479544 ZFP69Q49AA0 526 aa13.45□□□□□ -0.26
USP42-206ENST00000479544 CELF3Q5SZQ8 465 aaKnown RBP13.45□□□□□ -0.26
USP42-206ENST00000479544 ZNF605Q86T29 641 aa13.45□□□□□ -0.26
USP42-206ENST00000479544 CACYBPQ9HB71 228 aaKnown RBP13.45□□□□□ -0.26
USP42-206ENST00000479544 MOSPD1Q9UJG1 213 aa13.45□□□□□ -0.26
USP42-206ENST00000479544 IKZF3Q9UKT9 509 aa13.45□□□□□ -0.26
USP42-206ENST00000479544 KLHL20Q9Y2M5 609 aa13.45□□□□□ -0.26
USP42-206ENST00000479544 CEPT1Q9Y6K0 416 aa13.45□□□□□ -0.26
USP42-206ENST00000479544 NPEPPSL1A6NEC2 478 aa13.45□□□□□ -0.26
USP42-206ENST00000479544 COL6A1P12109 1028 aa13.45□□□□□ -0.26
USP42-206ENST00000479544 DSC2Q02487 901 aa13.45□□□□□ -0.26
USP42-206ENST00000479544 KRR1Q13601 381 aaKnown RBP13.45□□□□□ -0.26
USP42-206ENST00000479544 PTPRCAPQ14761 206 aa13.45□□□□□ -0.26
USP42-206ENST00000479544 UNC93AQ86WB7 457 aa13.45□□□□□ -0.26
USP42-206ENST00000479544 CPNE9Q8IYJ1 553 aa13.45□□□□□ -0.26
USP42-206ENST00000479544 C19orf18Q8NEA5 215 aa13.45□□□□□ -0.26
USP42-206ENST00000479544 GBA3Q9H227 469 aa13.45□□□□□ -0.26
USP42-206ENST00000479544 EMCNQ9ULC0 261 aa13.45□□□□□ -0.26
USP42-206ENST00000479544 NFASCO94856 1347 aa13.45□□□□□ -0.26
USP42-206ENST00000479544 A0A1W2PQ67 120 aa13.44□□□□□ -0.26
USP42-206ENST00000479544 TMCC2O75069 709 aa13.44□□□□□ -0.26
USP42-206ENST00000479544 ATE1O95260 518 aa13.44□□□□□ -0.26
USP42-206ENST00000479544 GPIP06744 558 aa13.44□□□□□ -0.26
USP42-206ENST00000479544 GSTM1P09488 218 aa13.44□□□□□ -0.26
USP42-206ENST00000479544 IFI30P13284 250 aa13.44□□□□□ -0.26
USP42-206ENST00000479544 MZF1P28698 734 aaPredicted RBP13.44□□□□□ -0.26
USP42-206ENST00000479544 NOVP48745 357 aa13.44□□□□□ -0.26
USP42-206ENST00000479544 SLC26A2P50443 739 aa13.44□□□□□ -0.26
USP42-206ENST00000479544 CLCQ05315 142 aa13.44□□□□□ -0.26
USP42-206ENST00000479544 C11orf96Q7Z7L8 435 aa13.44□□□□□ -0.26
USP42-206ENST00000479544 LPPQ93052 612 aa13.44□□□□□ -0.26
USP42-206ENST00000479544 XYLT2Q9H1B5 865 aa13.44□□□□□ -0.26
USP42-206ENST00000479544 TUBA8Q9NY65 449 aaPredicted RBP13.44□□□□□ -0.26
USP42-206ENST00000479544 SUCOQ9UBS9 1254 aaKnown RBP13.44□□□□□ -0.26
USP42-206ENST00000479544 MAP1BP46821 2468 aaKnown RBP13.44□□□□□ -0.26
USP42-206ENST00000479544 CCDC85CA6NKD9 419 aa13.44□□□□□ -0.26
USP42-206ENST00000479544 IGFBP5P24593 272 aa13.44□□□□□ -0.26
USP42-206ENST00000479544 SLC16A1P53985 500 aa13.44□□□□□ -0.26
USP42-206ENST00000479544 SPDYE7PQ495Y7 208 aa13.44□□□□□ -0.26
USP42-206ENST00000479544 RAP1GAP2Q684P5 730 aa13.44□□□□□ -0.26
USP42-206ENST00000479544 ZNF57Q68EA5 555 aaPredicted RBP13.44□□□□□ -0.26
USP42-206ENST00000479544 TIFABQ6ZNK6 161 aa13.44□□□□□ -0.26
USP42-206ENST00000479544 C15orf39Q6ZRI6 1047 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms