RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.35■□□□□ 0.05
C9orf3-217ENST00000479161 MED19A0JLT2 244 aaPredicted RBP15.35■□□□□ 0.05
C9orf3-217ENST00000479161 USP27XA6NNY8 438 aa15.35■□□□□ 0.05
C9orf3-217ENST00000479161 AGAP14A8MT82 685 aa15.35■□□□□ 0.05
C9orf3-217ENST00000479161 H7C0S8 307 aa15.35■□□□□ 0.05
C9orf3-217ENST00000479161 VEGFDO43915 354 aa15.35■□□□□ 0.05
C9orf3-217ENST00000479161 IFNB1P01574 187 aa15.35■□□□□ 0.05
C9orf3-217ENST00000479161 FUCA1P04066 466 aa15.35■□□□□ 0.05
C9orf3-217ENST00000479161 SPAM1P38567 509 aa15.35■□□□□ 0.05
C9orf3-217ENST00000479161 HADHAP40939 763 aa15.35■□□□□ 0.05
C9orf3-217ENST00000479161 E2F1Q01094 437 aa15.35■□□□□ 0.05
C9orf3-217ENST00000479161 SNX1Q13596 522 aa15.35■□□□□ 0.05
C9orf3-217ENST00000479161 ITGA9Q13797 1035 aa15.35■□□□□ 0.05
C9orf3-217ENST00000479161 SLCO6A1Q86UG4 719 aa15.35■□□□□ 0.05
C9orf3-217ENST00000479161 PDCD7Q8N8D1 485 aaKnown RBP15.35■□□□□ 0.05
C9orf3-217ENST00000479161 PEX13Q92968 403 aa15.35■□□□□ 0.05
C9orf3-217ENST00000479161 APOLD1Q96LR9 279 aa15.35■□□□□ 0.05
C9orf3-217ENST00000479161 SPATA16Q9BXB7 569 aa15.35■□□□□ 0.05
C9orf3-217ENST00000479161 GSDMCQ9BYG8 508 aa15.35■□□□□ 0.05
C9orf3-217ENST00000479161 ETNK1Q9HBU6 452 aa15.35■□□□□ 0.05
C9orf3-217ENST00000479161 CYP4F12Q9HCS2 524 aa15.35■□□□□ 0.05
C9orf3-217ENST00000479161 RNF14Q9UBS8 474 aa15.35■□□□□ 0.05
C9orf3-217ENST00000479161 CACNA1BQ00975 2339 aa15.35■□□□□ 0.05
C9orf3-217ENST00000479161 EPG5Q9HCE0 2579 aa15.34■□□□□ 0.05
C9orf3-217ENST00000479161 CEP295Q9C0D2 2601 aa15.34■□□□□ 0.05
C9orf3-217ENST00000479161 SPEGQ15772 3267 aa15.34■□□□□ 0.05
C9orf3-217ENST00000479161 LY6G6EA0A0G2JKS1 128 aa15.34■□□□□ 0.05
C9orf3-217ENST00000479161 EME2A4GXA9 379 aaPredicted RBP15.34■□□□□ 0.05
C9orf3-217ENST00000479161 GOLGA8CPA6NN73 597 aa15.34■□□□□ 0.05
C9orf3-217ENST00000479161 CHUKO15111 745 aa15.34■□□□□ 0.05
C9orf3-217ENST00000479161 STX7O15400 261 aaKnown RBP15.34■□□□□ 0.05
C9orf3-217ENST00000479161 LDB2O43679 373 aa15.34■□□□□ 0.05
C9orf3-217ENST00000479161 DNAJC6O75061 913 aa15.34■□□□□ 0.05
C9orf3-217ENST00000479161 SLC25A14O95258 325 aaPredicted RBP15.34■□□□□ 0.05
C9orf3-217ENST00000479161 RPL22P35268 128 aaKnown RBP15.34■□□□□ 0.05
C9orf3-217ENST00000479161 FNTAP49354 379 aa15.34■□□□□ 0.05
C9orf3-217ENST00000479161 CLCNKAP51800 687 aa15.34■□□□□ 0.05
C9orf3-217ENST00000479161 GNG11P61952 73 aa15.34■□□□□ 0.05
C9orf3-217ENST00000479161 CDH17Q12864 832 aa15.34■□□□□ 0.05
C9orf3-217ENST00000479161 SMAD1Q15797 465 aaKnown RBP15.34■□□□□ 0.05
C9orf3-217ENST00000479161 PYCR3Q53H96 274 aa15.34■□□□□ 0.05
C9orf3-217ENST00000479161 PHYKPLQ8IUZ5 450 aa15.34■□□□□ 0.05
C9orf3-217ENST00000479161 NAT6Q93015 286 aa15.34■□□□□ 0.05
C9orf3-217ENST00000479161 TMEM168Q9H0V1 697 aa15.34■□□□□ 0.05
C9orf3-217ENST00000479161 CARS2Q9HA77 564 aaKnown RBP15.34■□□□□ 0.05
C9orf3-217ENST00000479161 MRPL40Q9NQ50 206 aaKnown RBP15.34■□□□□ 0.05
C9orf3-217ENST00000479161 RAB6BQ9NRW1 208 aa15.34■□□□□ 0.05
C9orf3-217ENST00000479161 SUFUQ9UMX1 484 aa15.34■□□□□ 0.05
C9orf3-217ENST00000479161 U3KQA8 63 aa15.34■□□□□ 0.05
C9orf3-217ENST00000479161 KMT2BQ9UMN6 2715 aaPredicted RBP15.34■□□□□ 0.05
C9orf3-217ENST00000479161 PLXNB3Q9ULL4 1909 aa15.33■□□□□ 0.05
C9orf3-217ENST00000479161 GOLGA6L10A0A0M3HER8 536 aa15.33■□□□□ 0.04
C9orf3-217ENST00000479161 F5H423 210 aaPredicted RBP15.33■□□□□ 0.04
C9orf3-217ENST00000479161 NUAK1O60285 661 aa15.33■□□□□ 0.04
C9orf3-217ENST00000479161 RFPL3O75679 317 aa15.33■□□□□ 0.04
C9orf3-217ENST00000479161 GAS8O95995 478 aa15.33■□□□□ 0.04
C9orf3-217ENST00000479161 PNLIPP16233 465 aa15.33■□□□□ 0.04
C9orf3-217ENST00000479161 MAGEA6P43360 314 aa15.33■□□□□ 0.04
C9orf3-217ENST00000479161 ZNF140P52738 457 aaPredicted RBP15.33■□□□□ 0.04
C9orf3-217ENST00000479161 ILF3Q12906 894 aaKnown RBP eCLIP15.33■□□□□ 0.04
C9orf3-217ENST00000479161 LDLRAP1Q5SW96 308 aa15.33■□□□□ 0.04
C9orf3-217ENST00000479161 KCTD16Q68DU8 428 aa15.33■□□□□ 0.04
C9orf3-217ENST00000479161 RD3Q7Z3Z2 195 aa15.33■□□□□ 0.04
C9orf3-217ENST00000479161 C17orf82Q86X59 251 aaPredicted RBP15.33■□□□□ 0.04
C9orf3-217ENST00000479161 GALNT15Q8N3T1 639 aa15.33■□□□□ 0.04
C9orf3-217ENST00000479161 ARL10Q8N8L6 244 aa15.33■□□□□ 0.04
C9orf3-217ENST00000479161 GPR156Q8NFN8 814 aa15.33■□□□□ 0.04
C9orf3-217ENST00000479161 WDR48Q8TAF3 677 aa15.33■□□□□ 0.04
C9orf3-217ENST00000479161 COG1Q8WTW3 980 aa15.33■□□□□ 0.04
C9orf3-217ENST00000479161 STYXQ8WUJ0 223 aa15.33■□□□□ 0.04
C9orf3-217ENST00000479161 MAGOHBQ96A72 148 aaKnown RBP15.33■□□□□ 0.04
C9orf3-217ENST00000479161 RANBP9Q96S59 729 aa15.33■□□□□ 0.04
C9orf3-217ENST00000479161 NAPGQ99747 312 aaPredicted RBP15.33■□□□□ 0.04
C9orf3-217ENST00000479161 CASS4Q9NQ75 786 aa15.33■□□□□ 0.04
C9orf3-217ENST00000479161 DOLKQ9UPQ8 538 aa15.33■□□□□ 0.04
C9orf3-217ENST00000479161 NEUROG3Q9Y4Z2 214 aa15.33■□□□□ 0.04
C9orf3-217ENST00000479161 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.33■□□□□ 0.04
C9orf3-217ENST00000479161 GLYATL1P3A0A0U1RQE8 302 aa15.32■□□□□ 0.04
C9orf3-217ENST00000479161 CTAGE9A4FU28 777 aa15.32■□□□□ 0.04
C9orf3-217ENST00000479161 KLHL33A6NCF5 533 aa15.32■□□□□ 0.04
C9orf3-217ENST00000479161 MROH6A6NGR9 719 aa15.32■□□□□ 0.04
C9orf3-217ENST00000479161 E7EVH7 732 aa15.32■□□□□ 0.04
C9orf3-217ENST00000479161 GAPDHSO14556 408 aaPredicted RBP15.32■□□□□ 0.04
C9orf3-217ENST00000479161 FFAR2O15552 330 aa15.32■□□□□ 0.04
C9orf3-217ENST00000479161 KCNJ13O60928 360 aa15.32■□□□□ 0.04
C9orf3-217ENST00000479161 USP12O75317 370 aa15.32■□□□□ 0.04
C9orf3-217ENST00000479161 COILP38432 576 aaPredicted RBP15.32■□□□□ 0.04
C9orf3-217ENST00000479161 ADCY8P40145 1251 aa15.32■□□□□ 0.04
C9orf3-217ENST00000479161 C1orf61Q13536 156 aa15.32■□□□□ 0.04
C9orf3-217ENST00000479161 NR0B2Q15466 257 aa15.32■□□□□ 0.04
C9orf3-217ENST00000479161 DEFB133Q30KQ1 61 aa15.32■□□□□ 0.04
C9orf3-217ENST00000479161 GPR33Q49SQ1 333 aa15.32■□□□□ 0.04
C9orf3-217ENST00000479161 ATP13A5Q4VNC0 1218 aa15.32■□□□□ 0.04
C9orf3-217ENST00000479161 NLRP9Q7RTR0 991 aa15.32■□□□□ 0.04
C9orf3-217ENST00000479161 GSTA5Q7RTV2 222 aa15.32■□□□□ 0.04
C9orf3-217ENST00000479161 TMPRSS7Q7RTY8 843 aa15.32■□□□□ 0.04
C9orf3-217ENST00000479161 TMPRSS12Q86WS5 348 aa15.32■□□□□ 0.04
C9orf3-217ENST00000479161 GALNT13Q8IUC8 556 aa15.32■□□□□ 0.04
C9orf3-217ENST00000479161 GLIS1Q8NBF1 620 aa15.32■□□□□ 0.04
C9orf3-217ENST00000479161 DDHD1Q8NEL9 900 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms