RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 SH3GL3Q99963 347 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 CORO1CQ9ULV4 474 aaPredicted RBP14.15□□□□□ -0.14
NPHP4-208ENST00000478423 DHRS12A0PJE2 317 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 ESR1P03372 595 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 COL6A1P12109 1028 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 IMPDH2P12268 514 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 NRG1Q02297 640 aaPredicted RBP14.15□□□□□ -0.14
NPHP4-208ENST00000478423 SLC20A2Q08357 652 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 TCEAL1Q15170 157 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 ZDHHC20Q5W0Z9 365 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 MSANTD2Q6P1R3 559 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 ZNF280BQ86YH2 543 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 ZBTB2Q8N680 514 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 BTN2A2Q8WVV5 523 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 FEM1CQ96JP0 617 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 PPM1MQ96MI6 270 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 RAD21L1Q9H4I0 556 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 NOL11Q9H8H0 719 aaKnown RBP14.15□□□□□ -0.14
NPHP4-208ENST00000478423 PDLIM7Q9NR12 457 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 IMP3Q9NV31 184 aaKnown RBP14.15□□□□□ -0.14
NPHP4-208ENST00000478423 DUSP12Q9UNI6 340 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 MFHAS1Q9Y4C4 1052 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 TEX264Q9Y6I9 313 aa14.15□□□□□ -0.14
NPHP4-208ENST00000478423 A0A088AWK7 358 aa14.14□□□□□ -0.15
NPHP4-208ENST00000478423 DNTTP04053 509 aa14.14□□□□□ -0.15
NPHP4-208ENST00000478423 ZNF10P21506 573 aaPredicted RBP14.14□□□□□ -0.15
NPHP4-208ENST00000478423 ACVRL1P37023 503 aa14.14□□□□□ -0.15
NPHP4-208ENST00000478423 GPX6P59796 221 aa14.14□□□□□ -0.15
NPHP4-208ENST00000478423 PITX1P78337 314 aaPredicted RBP14.14□□□□□ -0.15
NPHP4-208ENST00000478423 NAE1Q13564 534 aa14.14□□□□□ -0.15
NPHP4-208ENST00000478423 ATAT1Q5SQI0 421 aa14.14□□□□□ -0.15
NPHP4-208ENST00000478423 LPCAT2Q7L5N7 544 aa14.14□□□□□ -0.15
NPHP4-208ENST00000478423 C8orf48Q96LL4 319 aa14.14□□□□□ -0.15
NPHP4-208ENST00000478423 CYP2S1Q96SQ9 504 aa14.14□□□□□ -0.15
NPHP4-208ENST00000478423 SMAD5Q99717 465 aaKnown RBP14.14□□□□□ -0.15
NPHP4-208ENST00000478423 ARL5AQ9Y689 179 aa14.14□□□□□ -0.15
NPHP4-208ENST00000478423 ERAL1O75616 437 aaKnown RBP14.14□□□□□ -0.15
NPHP4-208ENST00000478423 PRNPP04156 253 aa14.14□□□□□ -0.15
NPHP4-208ENST00000478423 OLIG2Q13516 323 aa14.14□□□□□ -0.15
NPHP4-208ENST00000478423 SPIDRQ14159 915 aa14.14□□□□□ -0.15
NPHP4-208ENST00000478423 LACTB2Q53H82 288 aaPredicted RBP14.14□□□□□ -0.15
NPHP4-208ENST00000478423 KRT73Q86Y46 540 aa14.14□□□□□ -0.15
NPHP4-208ENST00000478423 ACDQ96AP0 544 aa14.14□□□□□ -0.15
NPHP4-208ENST00000478423 WRAP53Q9BUR4 548 aaKnown RBP14.14□□□□□ -0.15
NPHP4-208ENST00000478423 ZMYND8Q9ULU4 1186 aaPredicted RBP14.14□□□□□ -0.15
NPHP4-208ENST00000478423 MYH8P13535 1937 aa14.14□□□□□ -0.15
NPHP4-208ENST00000478423 CHD4Q14839 1912 aa14.14□□□□□ -0.15
NPHP4-208ENST00000478423 A0A1W2PQ45 241 aaPredicted RBP14.14□□□□□ -0.15
NPHP4-208ENST00000478423 A0A1W2PQY0 241 aa14.14□□□□□ -0.15
NPHP4-208ENST00000478423 C9JVG2 144 aa14.14□□□□□ -0.15
NPHP4-208ENST00000478423 NTSP30990 170 aa14.14□□□□□ -0.15
NPHP4-208ENST00000478423 PTGER3P43115 390 aa14.14□□□□□ -0.15
NPHP4-208ENST00000478423 BNIP2Q12982 314 aa14.14□□□□□ -0.15
NPHP4-208ENST00000478423 PAFAH1B3Q15102 231 aaKnown RBP14.14□□□□□ -0.15
NPHP4-208ENST00000478423 ZIK1Q3SY52 487 aaPredicted RBP14.14□□□□□ -0.15
NPHP4-208ENST00000478423 PAGE2Q7Z2X7 111 aa14.14□□□□□ -0.15
NPHP4-208ENST00000478423 PIGWQ7Z7B1 504 aa14.14□□□□□ -0.15
NPHP4-208ENST00000478423 SAPCD2Q86UD0 394 aa14.14□□□□□ -0.15
NPHP4-208ENST00000478423 SETD9Q8NE22 299 aa14.14□□□□□ -0.15
NPHP4-208ENST00000478423 SH3RF2Q8TEC5 729 aa14.14□□□□□ -0.15
NPHP4-208ENST00000478423 DCAKDQ8WVC6 231 aa14.14□□□□□ -0.15
NPHP4-208ENST00000478423 KLHL32Q96NJ5 620 aa14.14□□□□□ -0.15
NPHP4-208ENST00000478423 APOL4Q9BPW4 351 aa14.14□□□□□ -0.15
NPHP4-208ENST00000478423 HEPHQ9BQS7 1158 aa14.14□□□□□ -0.15
NPHP4-208ENST00000478423 CCDC28BQ9BUN5 200 aa14.14□□□□□ -0.15
NPHP4-208ENST00000478423 PRRG3Q9BZD7 231 aa14.14□□□□□ -0.15
NPHP4-208ENST00000478423 HAPLN2Q9GZV7 340 aa14.14□□□□□ -0.15
NPHP4-208ENST00000478423 ADAMTS10Q9H324 1103 aa14.14□□□□□ -0.15
NPHP4-208ENST00000478423 KRCC1Q9NPI7 259 aaPredicted RBP14.14□□□□□ -0.15
NPHP4-208ENST00000478423 RPS6KB2Q9UBS0 482 aa14.14□□□□□ -0.15
NPHP4-208ENST00000478423 ZNF490Q9ULM2 529 aaPredicted RBP14.14□□□□□ -0.15
NPHP4-208ENST00000478423 SCML2Q9UQR0 700 aa14.14□□□□□ -0.15
NPHP4-208ENST00000478423 ATG13O75143 517 aa14.13□□□□□ -0.15
NPHP4-208ENST00000478423 SERPINI2O75830 405 aa14.13□□□□□ -0.15
NPHP4-208ENST00000478423 F7P08709 466 aaPredicted RBP14.13□□□□□ -0.15
NPHP4-208ENST00000478423 ZCCHC8Q6NZY4 707 aaKnown RBP14.13□□□□□ -0.15
NPHP4-208ENST00000478423 TMC5Q6UXY8 1006 aa14.13□□□□□ -0.15
NPHP4-208ENST00000478423 ASB3Q9Y575 518 aa14.13□□□□□ -0.15
NPHP4-208ENST00000478423 GRIN2DO15399 1336 aa14.13□□□□□ -0.15
NPHP4-208ENST00000478423 A8MUI8 341 aa14.13□□□□□ -0.15
NPHP4-208ENST00000478423 TM7SF2O76062 418 aa14.13□□□□□ -0.15
NPHP4-208ENST00000478423 AMD1P17707 334 aa14.13□□□□□ -0.15
NPHP4-208ENST00000478423 HOXA11P31270 313 aaPredicted RBP14.13□□□□□ -0.15
NPHP4-208ENST00000478423 IDH2P48735 452 aaKnown RBP14.13□□□□□ -0.15
NPHP4-208ENST00000478423 ELP6Q0PNE2 266 aa14.13□□□□□ -0.15
NPHP4-208ENST00000478423 LSM12Q3MHD2 195 aaKnown RBP14.13□□□□□ -0.15
NPHP4-208ENST00000478423 LRRC73Q5JTD7 316 aa14.13□□□□□ -0.15
NPHP4-208ENST00000478423 C7orf61Q8IZ16 206 aa14.13□□□□□ -0.15
NPHP4-208ENST00000478423 CPSF7Q8N684 471 aaKnown RBP14.13□□□□□ -0.15
NPHP4-208ENST00000478423 AARSD1Q9BTE6 412 aaKnown RBP14.13□□□□□ -0.15
NPHP4-208ENST00000478423 DDX28Q9NUL7 540 aaKnown RBP14.13□□□□□ -0.15
NPHP4-208ENST00000478423 DNAJC11Q9NVH1 559 aa14.13□□□□□ -0.15
NPHP4-208ENST00000478423 DUS2Q9NX74 493 aaKnown RBP14.13□□□□□ -0.15
NPHP4-208ENST00000478423 CIDEBQ9UHD4 219 aa14.13□□□□□ -0.15
NPHP4-208ENST00000478423 OGNP20774 298 aaKnown RBP14.13□□□□□ -0.15
NPHP4-208ENST00000478423 CSKP41240 450 aa14.13□□□□□ -0.15
NPHP4-208ENST00000478423 SKP1P63208 163 aa14.13□□□□□ -0.15
NPHP4-208ENST00000478423 PRKCQQ04759 706 aa14.13□□□□□ -0.15
NPHP4-208ENST00000478423 CAPN13Q6MZZ7 669 aaPredicted RBP14.13□□□□□ -0.15
NPHP4-208ENST00000478423 ZC3H7AQ8IWR0 971 aaKnown RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 168.1 ms