RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 SLC38A3Q99624 504 aa12.89□□□□□ -0.35
ABCF3-212ENST00000478288 ZPBPQ9BS86 351 aa12.89□□□□□ -0.35
ABCF3-212ENST00000478288 HERPUD2Q9BSE4 406 aa12.89□□□□□ -0.35
ABCF3-212ENST00000478288 STN1Q9H668 368 aaKnown RBP12.89□□□□□ -0.35
ABCF3-212ENST00000478288 SLC39A1Q9NY26 324 aa12.89□□□□□ -0.35
ABCF3-212ENST00000478288 TMEM63CQ9P1W3 806 aa12.89□□□□□ -0.35
ABCF3-212ENST00000478288 IL17BQ9UHF5 180 aa12.89□□□□□ -0.35
ABCF3-212ENST00000478288 CD84Q9UIB8 345 aa12.89□□□□□ -0.35
ABCF3-212ENST00000478288 LCMT1Q9UIC8 334 aa12.89□□□□□ -0.35
ABCF3-212ENST00000478288 TMEM98Q9Y2Y6 226 aa12.89□□□□□ -0.35
ABCF3-212ENST00000478288 PRRC2CQ9Y520 2896 aaKnown RBP12.89□□□□□ -0.35
ABCF3-212ENST00000478288 KIR2DS5A0A0G2JLQ3 304 aa12.88□□□□□ -0.35
ABCF3-212ENST00000478288 A0A0G2JNG1 304 aa12.88□□□□□ -0.35
ABCF3-212ENST00000478288 A6NCN8 305 aa12.88□□□□□ -0.35
ABCF3-212ENST00000478288 GPR89AB7ZAQ6 455 aa12.88□□□□□ -0.35
ABCF3-212ENST00000478288 KIR2DS3K7RE56 304 aa12.88□□□□□ -0.35
ABCF3-212ENST00000478288 AGRPO00253 132 aa12.88□□□□□ -0.35
ABCF3-212ENST00000478288 PRLP01236 227 aa12.88□□□□□ -0.35
ABCF3-212ENST00000478288 CD48P09326 243 aa12.88□□□□□ -0.35
ABCF3-212ENST00000478288 GPR89BP0CG08 455 aa12.88□□□□□ -0.35
ABCF3-212ENST00000478288 LIFP15018 202 aa12.88□□□□□ -0.35
ABCF3-212ENST00000478288 PBX1P40424 430 aa12.88□□□□□ -0.35
ABCF3-212ENST00000478288 DSC2Q02487 901 aa12.88□□□□□ -0.35
ABCF3-212ENST00000478288 HHEXQ03014 270 aa12.88□□□□□ -0.35
ABCF3-212ENST00000478288 ITKQ08881 620 aa12.88□□□□□ -0.35
ABCF3-212ENST00000478288 MMRN1Q13201 1228 aa12.88□□□□□ -0.35
ABCF3-212ENST00000478288 IHHQ14623 411 aa12.88□□□□□ -0.35
ABCF3-212ENST00000478288 KIR2DS5Q14953 304 aa12.88□□□□□ -0.35
ABCF3-212ENST00000478288 PDK2Q15119 407 aa12.88□□□□□ -0.35
ABCF3-212ENST00000478288 ARHGAP22Q7Z5H3 698 aa12.88□□□□□ -0.35
ABCF3-212ENST00000478288 TRIM74Q86UV6 250 aa12.88□□□□□ -0.35
ABCF3-212ENST00000478288 ARRDC2Q8TBH0 407 aa12.88□□□□□ -0.35
ABCF3-212ENST00000478288 HDAC11Q96DB2 347 aa12.88□□□□□ -0.35
ABCF3-212ENST00000478288 AHCYL2Q96HN2 611 aaKnown RBP12.88□□□□□ -0.35
ABCF3-212ENST00000478288 AGAP2Q99490 1192 aa12.88□□□□□ -0.35
ABCF3-212ENST00000478288 RIOK2Q9BVS4 552 aaKnown RBP12.88□□□□□ -0.35
ABCF3-212ENST00000478288 PCDH9Q9HC56 1237 aa12.88□□□□□ -0.35
ABCF3-212ENST00000478288 RBM22Q9NW64 420 aaKnown RBP eCLIP12.88□□□□□ -0.35
ABCF3-212ENST00000478288 TMEM9Q9P0T7 183 aa12.88□□□□□ -0.35
ABCF3-212ENST00000478288 PILRAQ9UKJ1 303 aa12.88□□□□□ -0.35
ABCF3-212ENST00000478288 CNOT6Q9ULM6 557 aaKnown RBP12.88□□□□□ -0.35
ABCF3-212ENST00000478288 PLEKHM1Q9Y4G2 1056 aa12.88□□□□□ -0.35
ABCF3-212ENST00000478288 ZNF106Q9H2Y7 1883 aaKnown RBP12.88□□□□□ -0.35
ABCF3-212ENST00000478288 A0A0U1RQS6 177 aa12.87□□□□□ -0.35
ABCF3-212ENST00000478288 OR5K4A6NMS3 321 aa12.87□□□□□ -0.35
ABCF3-212ENST00000478288 EFCAB7A8K855 629 aa12.87□□□□□ -0.35
ABCF3-212ENST00000478288 ZNF891A8MT65 544 aaPredicted RBP12.87□□□□□ -0.35
ABCF3-212ENST00000478288 RAD1O60671 282 aa12.87□□□□□ -0.35
ABCF3-212ENST00000478288 MAP3K6O95382 1288 aa12.87□□□□□ -0.35
ABCF3-212ENST00000478288 SERPINC1P01008 464 aa12.87□□□□□ -0.35
ABCF3-212ENST00000478288 SPINT3P49223 89 aa12.87□□□□□ -0.35
ABCF3-212ENST00000478288 CLCNKAP51800 687 aa12.87□□□□□ -0.35
ABCF3-212ENST00000478288 CYP4F2P78329 520 aa12.87□□□□□ -0.35
ABCF3-212ENST00000478288 ZBED6P86452 979 aa12.87□□□□□ -0.35
ABCF3-212ENST00000478288 MC2RQ01718 297 aa12.87□□□□□ -0.35
ABCF3-212ENST00000478288 CLCA4Q14CN2 919 aa12.87□□□□□ -0.35
ABCF3-212ENST00000478288 IQCB1Q15051 598 aa12.87□□□□□ -0.35
ABCF3-212ENST00000478288 ANKRD20A8PQ5CZ79 823 aa12.87□□□□□ -0.35
ABCF3-212ENST00000478288 IYDQ6PHW0 289 aa12.87□□□□□ -0.35
ABCF3-212ENST00000478288 MARK2Q7KZI7 788 aaKnown RBP12.87□□□□□ -0.35
ABCF3-212ENST00000478288 LYSMD3Q7Z3D4 306 aa12.87□□□□□ -0.35
ABCF3-212ENST00000478288 SLC9B2Q86UD5 537 aa12.87□□□□□ -0.35
ABCF3-212ENST00000478288 FAM129CQ86XR2 697 aa12.87□□□□□ -0.35
ABCF3-212ENST00000478288 MAP7D3Q8IWC1 876 aa12.87□□□□□ -0.35
ABCF3-212ENST00000478288 CACNA2D3Q8IZS8 1091 aa12.87□□□□□ -0.35
ABCF3-212ENST00000478288 SLC45A3Q96JT2 553 aa12.87□□□□□ -0.35
ABCF3-212ENST00000478288 BTBD6Q96KE9 485 aa12.87□□□□□ -0.35
ABCF3-212ENST00000478288 EFHD1Q9BUP0 239 aa12.87□□□□□ -0.35
ABCF3-212ENST00000478288 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.87□□□□□ -0.35
ABCF3-212ENST00000478288 SPRY4Q9C004 299 aa12.87□□□□□ -0.35
ABCF3-212ENST00000478288 UCK1Q9HA47 277 aa12.87□□□□□ -0.35
ABCF3-212ENST00000478288 FBXO8Q9NRD0 319 aa12.87□□□□□ -0.35
ABCF3-212ENST00000478288 OCIAD1Q9NX40 245 aa12.87□□□□□ -0.35
ABCF3-212ENST00000478288 NFKBIL1Q9UBC1 381 aaPredicted RBP12.87□□□□□ -0.35
ABCF3-212ENST00000478288 TBC1D29Q9UFV1 150 aa12.87□□□□□ -0.35
ABCF3-212ENST00000478288 CHKBQ9Y259 395 aa12.87□□□□□ -0.35
ABCF3-212ENST00000478288 A0A087X0T9 212 aa12.86□□□□□ -0.35
ABCF3-212ENST00000478288 C1orf232A0A0U1RR37 186 aa12.86□□□□□ -0.35
ABCF3-212ENST00000478288 LILRA5A6NI73 299 aa12.86□□□□□ -0.35
ABCF3-212ENST00000478288 INPP4BO15327 924 aa12.86□□□□□ -0.35
ABCF3-212ENST00000478288 ARHGAP6O43182 974 aa12.86□□□□□ -0.35
ABCF3-212ENST00000478288 CLDN7O95471 211 aa12.86□□□□□ -0.35
ABCF3-212ENST00000478288 ASMTLO95671 621 aa12.86□□□□□ -0.35
ABCF3-212ENST00000478288 EML2O95834 649 aa12.86□□□□□ -0.35
ABCF3-212ENST00000478288 HLA-DQB2P05538 268 aa12.86□□□□□ -0.35
ABCF3-212ENST00000478288 KRT7P08729 469 aa12.86□□□□□ -0.35
ABCF3-212ENST00000478288 ANKRD34CP0C6C1 535 aa12.86□□□□□ -0.35
ABCF3-212ENST00000478288 FAM228BP0C875 321 aa12.86□□□□□ -0.35
ABCF3-212ENST00000478288 F3P13726 295 aa12.86□□□□□ -0.35
ABCF3-212ENST00000478288 MAP4P27816 1152 aaKnown RBP12.86□□□□□ -0.35
ABCF3-212ENST00000478288 DCDC1P59894 354 aa12.86□□□□□ -0.35
ABCF3-212ENST00000478288 CRTC2Q53ET0 693 aaPredicted RBP12.86□□□□□ -0.35
ABCF3-212ENST00000478288 ANKS6Q68DC2 871 aa12.86□□□□□ -0.35
ABCF3-212ENST00000478288 PDPK2PQ6A1A2 396 aa12.86□□□□□ -0.35
ABCF3-212ENST00000478288 ALKBH5Q6P6C2 394 aaKnown RBP12.86□□□□□ -0.35
ABCF3-212ENST00000478288 CEACAM20Q6UY09 585 aa12.86□□□□□ -0.35
ABCF3-212ENST00000478288 VSIG1Q86XK7 387 aa12.86□□□□□ -0.35
ABCF3-212ENST00000478288 NLGN4XQ8N0W4 816 aa12.86□□□□□ -0.35
ABCF3-212ENST00000478288 NLGN4YQ8NFZ3 816 aaPredicted RBP12.86□□□□□ -0.35
ABCF3-212ENST00000478288 ZNF564Q8TBZ8 553 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms