RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 E7ENQ6 273 aa4.71□□□□□ -1.66
LMBR1-216ENST00000477983 PCDH17O14917 1159 aa4.71□□□□□ -1.66
LMBR1-216ENST00000477983 MGRN1O60291 552 aa4.71□□□□□ -1.66
LMBR1-216ENST00000477983 ATP5HO75947 161 aa4.71□□□□□ -1.66
LMBR1-216ENST00000477983 FLOT1O75955 427 aa4.71□□□□□ -1.66
LMBR1-216ENST00000477983 LUC7L3O95232 432 aaKnown RBP4.71□□□□□ -1.66
LMBR1-216ENST00000477983 KRT18P05783 430 aaKnown RBP4.71□□□□□ -1.66
LMBR1-216ENST00000477983 ATP5DP30049 168 aa4.71□□□□□ -1.66
LMBR1-216ENST00000477983 ELF1P32519 619 aa4.71□□□□□ -1.66
LMBR1-216ENST00000477983 CIITAP33076 1130 aa4.71□□□□□ -1.66
LMBR1-216ENST00000477983 RFX2P48378 723 aa4.71□□□□□ -1.66
LMBR1-216ENST00000477983 NEK3P51956 506 aa4.71□□□□□ -1.66
LMBR1-216ENST00000477983 IRX1P78414 480 aaPredicted RBP4.71□□□□□ -1.66
LMBR1-216ENST00000477983 GAD2Q05329 585 aa4.71□□□□□ -1.66
LMBR1-216ENST00000477983 LTBQ06643 244 aa4.71□□□□□ -1.66
LMBR1-216ENST00000477983 GRM4Q14833 912 aa4.71□□□□□ -1.66
LMBR1-216ENST00000477983 LONRF1Q17RB8 773 aa4.71□□□□□ -1.66
LMBR1-216ENST00000477983 SFMBT2Q5VUG0 894 aa4.71□□□□□ -1.66
LMBR1-216ENST00000477983 SPATA2LQ8IUW3 424 aaPredicted RBP4.71□□□□□ -1.66
LMBR1-216ENST00000477983 CCDC13Q8IYE1 715 aa4.71□□□□□ -1.66
LMBR1-216ENST00000477983 MAB21L3Q8N8X9 362 aa4.71□□□□□ -1.66
LMBR1-216ENST00000477983 USP38Q8NB14 1042 aa4.71□□□□□ -1.66
LMBR1-216ENST00000477983 SVIPQ8NHG7 77 aa4.71□□□□□ -1.66
LMBR1-216ENST00000477983 MORC4Q8TE76 937 aa4.71□□□□□ -1.66
LMBR1-216ENST00000477983 PARD3BQ8TEW8 1205 aa4.71□□□□□ -1.66
LMBR1-216ENST00000477983 SCFD2Q8WU76 684 aa4.71□□□□□ -1.66
LMBR1-216ENST00000477983 OIT3Q8WWZ8 545 aa4.71□□□□□ -1.66
LMBR1-216ENST00000477983 INPP5DQ92835 1189 aa4.71□□□□□ -1.66
LMBR1-216ENST00000477983 PGM2Q96G03 612 aa4.71□□□□□ -1.66
LMBR1-216ENST00000477983 CAPZA3Q96KX2 299 aa4.71□□□□□ -1.66
LMBR1-216ENST00000477983 IFT74Q96LB3 600 aa4.71□□□□□ -1.66
LMBR1-216ENST00000477983 CCDC114Q96M63 670 aa4.71□□□□□ -1.66
LMBR1-216ENST00000477983 RIPOR3Q96MK2 946 aa4.71□□□□□ -1.66
LMBR1-216ENST00000477983 ZIM3Q96PE6 472 aa4.71□□□□□ -1.66
LMBR1-216ENST00000477983 TMEM47Q9BQJ4 181 aa4.71□□□□□ -1.66
LMBR1-216ENST00000477983 TMEM109Q9BVC6 243 aa4.71□□□□□ -1.66
LMBR1-216ENST00000477983 SF3B5Q9BWJ5 86 aaKnown RBP4.71□□□□□ -1.66
LMBR1-216ENST00000477983 ROPN1BQ9BZX4 212 aaPredicted RBP4.71□□□□□ -1.66
LMBR1-216ENST00000477983 ZMYND12Q9H0C1 365 aa4.71□□□□□ -1.66
LMBR1-216ENST00000477983 TAOK3Q9H2K8 898 aa4.71□□□□□ -1.66
LMBR1-216ENST00000477983 TDRD3Q9H7E2 651 aaKnown RBP4.71□□□□□ -1.66
LMBR1-216ENST00000477983 ROPN1Q9HAT0 212 aaPredicted RBP4.71□□□□□ -1.66
LMBR1-216ENST00000477983 C6orf50Q9HD87 102 aa4.71□□□□□ -1.66
LMBR1-216ENST00000477983 SPAG4Q9NPE6 437 aa4.71□□□□□ -1.66
LMBR1-216ENST00000477983 HOMER3Q9NSC5 361 aa4.71□□□□□ -1.66
LMBR1-216ENST00000477983 AGPAT5Q9NUQ2 364 aa4.71□□□□□ -1.66
LMBR1-216ENST00000477983 BARHL2Q9NY43 387 aa4.71□□□□□ -1.66
LMBR1-216ENST00000477983 HDAC6Q9UBN7 1215 aa4.71□□□□□ -1.66
LMBR1-216ENST00000477983 WNT16Q9UBV4 365 aa4.71□□□□□ -1.66
LMBR1-216ENST00000477983 LRWD1Q9UFC0 647 aa4.71□□□□□ -1.66
LMBR1-216ENST00000477983 ODF2LQ9ULJ1 636 aa4.71□□□□□ -1.66
LMBR1-216ENST00000477983 UTP11Q9Y3A2 253 aaKnown RBP4.71□□□□□ -1.66
LMBR1-216ENST00000477983 SNED1Q8TER0 1413 aa4.71□□□□□ -1.66
LMBR1-216ENST00000477983 SCN9AQ15858 1988 aa4.71□□□□□ -1.66
LMBR1-216ENST00000477983 TCF20Q9UGU0 1960 aaKnown RBP4.71□□□□□ -1.66
LMBR1-216ENST00000477983 KDM3AQ9Y4C1 1321 aa4.71□□□□□ -1.66
LMBR1-216ENST00000477983 FOCADQ5VW36 1801 aa4.7□□□□□ -1.66
LMBR1-216ENST00000477983 DDX60LQ5H9U9 1706 aaKnown RBP4.7□□□□□ -1.66
LMBR1-216ENST00000477983 LOC102724159A0A0B4J2E5 919 aa4.7□□□□□ -1.66
LMBR1-216ENST00000477983 RPS10-NUDT3A0A1W2PQS6 291 aa4.7□□□□□ -1.66
LMBR1-216ENST00000477983 CLRN2A0PK11 232 aa4.7□□□□□ -1.66
LMBR1-216ENST00000477983 GTPBP10A4D1E9 387 aaKnown RBP4.7□□□□□ -1.66
LMBR1-216ENST00000477983 DDTLA6NHG4 134 aaPredicted RBP4.7□□□□□ -1.66
LMBR1-216ENST00000477983 CYSRT1A8MQ03 144 aa4.7□□□□□ -1.66
LMBR1-216ENST00000477983 TCP10L2B9ZVM9 353 aa4.7□□□□□ -1.66
LMBR1-216ENST00000477983 E7EVH7 732 aa4.7□□□□□ -1.66
LMBR1-216ENST00000477983 H0YGN5 161 aa4.7□□□□□ -1.66
LMBR1-216ENST00000477983 PGRMC1O00264 195 aaKnown RBP4.7□□□□□ -1.66
LMBR1-216ENST00000477983 O00370 1275 aa4.7□□□□□ -1.66
LMBR1-216ENST00000477983 MPHOSPH10O00566 681 aaKnown RBP4.7□□□□□ -1.66
LMBR1-216ENST00000477983 ACOT8O14734 319 aa4.7□□□□□ -1.66
LMBR1-216ENST00000477983 HNRNPDLO14979 420 aaKnown RBP4.7□□□□□ -1.66
LMBR1-216ENST00000477983 MDM4O15151 490 aa4.7□□□□□ -1.66
LMBR1-216ENST00000477983 NKX2-8O15522 239 aa4.7□□□□□ -1.66
LMBR1-216ENST00000477983 HEXIM1O94992 359 aaKnown RBP4.7□□□□□ -1.66
LMBR1-216ENST00000477983 GGPS1O95749 300 aa4.7□□□□□ -1.66
LMBR1-216ENST00000477983 GLP2RO95838 553 aa4.7□□□□□ -1.66
LMBR1-216ENST00000477983 NUDT17P0C025 328 aa4.7□□□□□ -1.66
LMBR1-216ENST00000477983 OR52Z1P0C646 297 aa4.7□□□□□ -1.66
LMBR1-216ENST00000477983 GOLGA8HP0CJ92 632 aa4.7□□□□□ -1.66
LMBR1-216ENST00000477983 AKR1B1P15121 316 aa4.7□□□□□ -1.66
LMBR1-216ENST00000477983 CTNNA1P35221 906 aaKnown RBP4.7□□□□□ -1.66
LMBR1-216ENST00000477983 PRKCIP41743 596 aa4.7□□□□□ -1.66
LMBR1-216ENST00000477983 SKIV2L2P42285 1042 aaKnown RBP4.7□□□□□ -1.66
LMBR1-216ENST00000477983 CCNG1P51959 295 aa4.7□□□□□ -1.66
LMBR1-216ENST00000477983 ZNF131P52739 623 aa4.7□□□□□ -1.66
LMBR1-216ENST00000477983 GUCY2DQ02846 1103 aa4.7□□□□□ -1.66
LMBR1-216ENST00000477983 ICA1Q05084 483 aa4.7□□□□□ -1.66
LMBR1-216ENST00000477983 GABPAQ06546 454 aa4.7□□□□□ -1.66
LMBR1-216ENST00000477983 CXCL9Q07325 125 aa4.7□□□□□ -1.66
LMBR1-216ENST00000477983 C2orf54Q08AI8 447 aa4.7□□□□□ -1.66
LMBR1-216ENST00000477983 KEAP1Q14145 624 aa4.7□□□□□ -1.66
LMBR1-216ENST00000477983 DHX34Q14147 1143 aaKnown RBP4.7□□□□□ -1.66
LMBR1-216ENST00000477983 NONOQ15233 471 aaKnown RBP eCLIP4.7□□□□□ -1.66
LMBR1-216ENST00000477983 PWP2Q15269 919 aaKnown RBP4.7□□□□□ -1.66
LMBR1-216ENST00000477983 RPS6KA1Q15418 735 aa4.7□□□□□ -1.66
LMBR1-216ENST00000477983 AAK1Q2M2I8 961 aa4.7□□□□□ -1.66
LMBR1-216ENST00000477983 EDRF1Q3B7T1 1238 aa4.7□□□□□ -1.66
LMBR1-216ENST00000477983 ODF2Q5BJF6 829 aa4.7□□□□□ -1.66
LMBR1-216ENST00000477983 TTMPQ5BVD1 217 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms