RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 CCDC59Q9P031 241 aaKnown RBP12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 FBXO5Q9UKT4 447 aa12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 CNTN6Q9UQ52 1028 aa12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 RAD54BQ9Y620 910 aa12.63□□□□□ -0.39
RTFDC1-207ENST00000477573 B4GALT5O43286 388 aa12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 APOC1P02654 83 aa12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 SFTPCP11686 197 aa12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 BMP2P12643 396 aa12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 ACO1P21399 889 aaKnown RBP12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 GNA15P30679 374 aa12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 SOX9P48436 509 aa12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 DEFA1P59665 94 aa12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 DEFA3P59666 94 aa12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 YWHAEP62258 255 aaKnown RBP12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 TEKQ02763 1124 aa12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 C1QBPQ07021 282 aaKnown RBP12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 MERTKQ12866 999 aa12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 AQP6Q13520 282 aa12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 SEMA3AQ14563 771 aa12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 MORF4L2Q15014 288 aa12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 CCNYL2Q5T2Q4 361 aa12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 PDPK2PQ6A1A2 396 aa12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 TMEM270Q6UE05 265 aa12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 KIF18BQ86Y91 864 aa12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 KYQ8NBH2 561 aa12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 BPIFB6Q8NFQ5 453 aa12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 PSMA8Q8TAA3 256 aa12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 DCAKDQ8WVC6 231 aa12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 SMG7Q92540 1137 aaKnown RBP12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 PROX1Q92786 737 aa12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 KLHL32Q96NJ5 620 aa12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 ADPGKQ9BRR6 497 aa12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 C9orf16Q9BUW7 83 aa12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 TRAF4Q9BUZ4 470 aaPredicted RBP12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 NIF3L1Q9GZT8 377 aa12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 CHST7Q9NS84 486 aa12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 TEKT2Q9UIF3 430 aa12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 PCOLCE2Q9UKZ9 415 aa12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 F8W036 122 aa12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 ACOT8O14734 319 aa12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 KATNA1O75449 491 aa12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 VTNP04004 478 aa12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 HOXD4P09016 255 aaPredicted RBP12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 ACADMP11310 421 aa12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 RAB3AP20336 220 aa12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 EEF1B2P24534 225 aaKnown RBP12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 KLRC2P26717 231 aa12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 GJC1P36383 396 aa12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 NSFP46459 744 aaKnown RBP12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 ZBTB37Q5TC79 503 aa12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 EEF1DP3Q658K8 133 aa12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 ARHGAP36Q6ZRI8 547 aa12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 PIWIL3Q7Z3Z3 882 aaKnown RBP12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 AMIGO1Q86WK6 493 aa12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 SFRP1Q8N474 314 aa12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 EFCAB3Q8N7B9 438 aa12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 UBR7Q8N806 425 aa12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 OR2T3Q8NH03 318 aa12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 ZNF564Q8TBZ8 553 aaPredicted RBP12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 URGCPQ8TCY9 931 aa12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 SOCS4Q8WXH5 440 aa12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 ELMO3Q96BJ8 720 aa12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 LRRC39Q96DD0 335 aa12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 MLPHQ9BV36 600 aaPredicted RBP12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 LRRC40Q9H9A6 602 aa12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 NECTIN3Q9NQS3 549 aa12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 POLR3BQ9NW08 1133 aaPredicted RBP12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 DTX4Q9Y2E6 619 aa12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 MRPS7Q9Y2R9 242 aaKnown RBP12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 PLLPQ9Y342 182 aa12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 DGKBQ9Y6T7 804 aa12.62□□□□□ -0.39
RTFDC1-207ENST00000477573 MICAL2O94851 1124 aa12.61□□□□□ -0.39
RTFDC1-207ENST00000477573 STAG3L1P0CL83 205 aa12.61□□□□□ -0.39
RTFDC1-207ENST00000477573 DDCP20711 480 aa12.61□□□□□ -0.39
RTFDC1-207ENST00000477573 KELP23276 732 aa12.61□□□□□ -0.39
RTFDC1-207ENST00000477573 RPL10P27635 214 aaKnown RBP12.61□□□□□ -0.39
RTFDC1-207ENST00000477573 CYP2C18P33260 490 aa12.61□□□□□ -0.39
RTFDC1-207ENST00000477573 OSTNP61366 133 aa12.61□□□□□ -0.39
RTFDC1-207ENST00000477573 SREBF2Q12772 1141 aa12.61□□□□□ -0.39
RTFDC1-207ENST00000477573 CHI3L2Q15782 390 aa12.61□□□□□ -0.39
RTFDC1-207ENST00000477573 ZNF699Q32M78 642 aa12.61□□□□□ -0.39
RTFDC1-207ENST00000477573 PPP1R26Q5T8A7 1209 aaPredicted RBP12.61□□□□□ -0.39
RTFDC1-207ENST00000477573 STEAP3Q658P3 488 aa12.61□□□□□ -0.39
RTFDC1-207ENST00000477573 RETSATQ6NUM9 610 aa12.61□□□□□ -0.39
RTFDC1-207ENST00000477573 C17orf99Q6UX52 265 aa12.61□□□□□ -0.39
RTFDC1-207ENST00000477573 SLC16A12Q6ZSM3 486 aa12.61□□□□□ -0.39
RTFDC1-207ENST00000477573 PGAM4Q8N0Y7 254 aa12.61□□□□□ -0.39
RTFDC1-207ENST00000477573 ZNF565Q8N9K5 539 aa12.61□□□□□ -0.39
RTFDC1-207ENST00000477573 ZNF680Q8NEM1 530 aa12.61□□□□□ -0.39
RTFDC1-207ENST00000477573 OR8K5Q8NH50 307 aa12.61□□□□□ -0.39
RTFDC1-207ENST00000477573 BLOC1S5Q8TDH9 187 aa12.61□□□□□ -0.39
RTFDC1-207ENST00000477573 UFD1Q92890 307 aa12.61□□□□□ -0.39
RTFDC1-207ENST00000477573 PTP4A1Q93096 173 aa12.61□□□□□ -0.39
RTFDC1-207ENST00000477573 KCTD14Q9BQ13 255 aaPredicted RBP12.61□□□□□ -0.39
RTFDC1-207ENST00000477573 TTYH2Q9BSA4 534 aa12.61□□□□□ -0.39
RTFDC1-207ENST00000477573 ASB7Q9H672 318 aa12.61□□□□□ -0.39
RTFDC1-207ENST00000477573 ABCB10Q9NRK6 738 aa12.61□□□□□ -0.39
RTFDC1-207ENST00000477573 TINAGQ9UJW2 476 aa12.61□□□□□ -0.39
RTFDC1-207ENST00000477573 GMPPBQ9Y5P6 360 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms