RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 EVLQ9UI08 416 aaPredicted RBP14.56□□□□□ -0.08
HDAC6-220ENST00000477528 PNMA8BQ9ULN7 279 aaPredicted RBP14.56□□□□□ -0.08
HDAC6-220ENST00000477528 GNEQ9Y223 722 aaKnown RBP14.56□□□□□ -0.08
HDAC6-220ENST00000477528 POLR3HQ9Y535 204 aaPredicted RBP14.56□□□□□ -0.08
HDAC6-220ENST00000477528 MATN2O00339 956 aa14.56□□□□□ -0.08
HDAC6-220ENST00000477528 EPN2O95208 641 aa14.56□□□□□ -0.08
HDAC6-220ENST00000477528 COX7A2P14406 83 aa14.56□□□□□ -0.08
HDAC6-220ENST00000477528 LAG3P18627 525 aa14.56□□□□□ -0.08
HDAC6-220ENST00000477528 SETMARQ53H47 684 aaPredicted RBP14.56□□□□□ -0.08
HDAC6-220ENST00000477528 TBC1D21Q8IYX1 336 aa14.56□□□□□ -0.08
HDAC6-220ENST00000477528 SLAIN1Q8ND83 568 aa14.56□□□□□ -0.08
HDAC6-220ENST00000477528 SETD9Q8NE22 299 aa14.56□□□□□ -0.08
HDAC6-220ENST00000477528 B3GALT6Q96L58 329 aa14.56□□□□□ -0.08
HDAC6-220ENST00000477528 AHSPQ9NZD4 102 aa14.56□□□□□ -0.08
HDAC6-220ENST00000477528 LZTS1Q9Y250 596 aa14.56□□□□□ -0.08
HDAC6-220ENST00000477528 KAT6AQ92794 2004 aa14.56□□□□□ -0.08
HDAC6-220ENST00000477528 UBR3Q6ZT12 1888 aa14.56□□□□□ -0.08
HDAC6-220ENST00000477528 SLC9A3R1O14745 358 aaPredicted RBP14.56□□□□□ -0.08
HDAC6-220ENST00000477528 TTKP33981 857 aa14.56□□□□□ -0.08
HDAC6-220ENST00000477528 SLC26A3P40879 764 aa14.56□□□□□ -0.08
HDAC6-220ENST00000477528 ETV4P43268 484 aa14.56□□□□□ -0.08
HDAC6-220ENST00000477528 GPR15P49685 360 aa14.56□□□□□ -0.08
HDAC6-220ENST00000477528 CPSF6Q16630 551 aaKnown RBP eCLIP14.56□□□□□ -0.08
HDAC6-220ENST00000477528 RBM20Q5T481 1227 aaKnown RBP14.56□□□□□ -0.08
HDAC6-220ENST00000477528 TTC23Q5W5X9 447 aa14.56□□□□□ -0.08
HDAC6-220ENST00000477528 CCDC106Q9BWC9 280 aa14.56□□□□□ -0.08
HDAC6-220ENST00000477528 GIMAP4Q9NUV9 329 aa14.56□□□□□ -0.08
HDAC6-220ENST00000477528 MIOSQ9NXC5 875 aa14.56□□□□□ -0.08
HDAC6-220ENST00000477528 COPG1Q9Y678 874 aaKnown RBP14.56□□□□□ -0.08
HDAC6-220ENST00000477528 FTH1P02794 183 aa14.55□□□□□ -0.08
HDAC6-220ENST00000477528 ABRAXAS1Q6UWZ7 409 aa14.55□□□□□ -0.08
HDAC6-220ENST00000477528 OSBPL6Q9BZF3 934 aa14.55□□□□□ -0.08
HDAC6-220ENST00000477528 CCSER2Q9H7U1 834 aa14.55□□□□□ -0.08
HDAC6-220ENST00000477528 MIEF1Q9NQG6 463 aa14.55□□□□□ -0.08
HDAC6-220ENST00000477528 MAPRE3Q9UPY8 281 aa14.55□□□□□ -0.08
HDAC6-220ENST00000477528 PRAMEF1O95521 474 aa14.55□□□□□ -0.08
HDAC6-220ENST00000477528 RPL17P18621 184 aaKnown RBP14.55□□□□□ -0.08
HDAC6-220ENST00000477528 HPCAL1P37235 193 aa14.55□□□□□ -0.08
HDAC6-220ENST00000477528 RPS24P62847 133 aaKnown RBP14.55□□□□□ -0.08
HDAC6-220ENST00000477528 MTX3Q5HYI7 312 aa14.55□□□□□ -0.08
HDAC6-220ENST00000477528 POP5Q969H6 163 aaKnown RBP14.55□□□□□ -0.08
HDAC6-220ENST00000477528 PGAP3Q96FM1 320 aaPredicted RBP14.55□□□□□ -0.08
HDAC6-220ENST00000477528 CDKN2AIPNLQ96HQ2 116 aa14.55□□□□□ -0.08
HDAC6-220ENST00000477528 DACH2Q96NX9 599 aa14.55□□□□□ -0.08
HDAC6-220ENST00000477528 DEFB118Q96PH6 123 aa14.55□□□□□ -0.08
HDAC6-220ENST00000477528 C8orf4Q9NR00 106 aa14.55□□□□□ -0.08
HDAC6-220ENST00000477528 KCTD5Q9NXV2 234 aa14.55□□□□□ -0.08
HDAC6-220ENST00000477528 SCHIP1Q9P0W5 487 aaPredicted RBP14.55□□□□□ -0.08
HDAC6-220ENST00000477528 ZNHIT2Q9UHR6 403 aa14.55□□□□□ -0.08
HDAC6-220ENST00000477528 ANXA6P08133 673 aa14.55□□□□□ -0.08
HDAC6-220ENST00000477528 SPAM1P38567 509 aa14.55□□□□□ -0.08
HDAC6-220ENST00000477528 NEDD8Q15843 81 aa14.55□□□□□ -0.08
HDAC6-220ENST00000477528 AP5B1Q2VPB7 878 aa14.55□□□□□ -0.08
HDAC6-220ENST00000477528 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.55□□□□□ -0.08
HDAC6-220ENST00000477528 PLK2Q9NYY3 685 aa14.55□□□□□ -0.08
HDAC6-220ENST00000477528 LRRC42Q9Y546 428 aa14.55□□□□□ -0.08
HDAC6-220ENST00000477528 ILVBLA1L0T0 632 aa14.55□□□□□ -0.08
HDAC6-220ENST00000477528 ACVRL1P37023 503 aa14.55□□□□□ -0.08
HDAC6-220ENST00000477528 PKDCCQ504Y2 493 aa14.55□□□□□ -0.08
HDAC6-220ENST00000477528 ZDHHC20Q5W0Z9 365 aa14.55□□□□□ -0.08
HDAC6-220ENST00000477528 GCNT7Q6ZNI0 430 aa14.55□□□□□ -0.08
HDAC6-220ENST00000477528 C14orf80Q86SX3 495 aa14.55□□□□□ -0.08
HDAC6-220ENST00000477528 C8orf59Q8N0T1 100 aaPredicted RBP14.55□□□□□ -0.08
HDAC6-220ENST00000477528 ZBTB2Q8N680 514 aa14.55□□□□□ -0.08
HDAC6-220ENST00000477528 TMEM209Q96SK2 561 aa14.55□□□□□ -0.08
HDAC6-220ENST00000477528 ADPRHL2Q9NX46 363 aa14.55□□□□□ -0.08
HDAC6-220ENST00000477528 RNASEH1O60930 286 aaKnown RBP14.54□□□□□ -0.08
HDAC6-220ENST00000477528 RXRGP48443 463 aa14.54□□□□□ -0.08
HDAC6-220ENST00000477528 AQP4P55087 323 aa14.54□□□□□ -0.08
HDAC6-220ENST00000477528 GPR17Q13304 367 aa14.54□□□□□ -0.08
HDAC6-220ENST00000477528 SDE2Q6IQ49 451 aa14.54□□□□□ -0.08
HDAC6-220ENST00000477528 SPPL2CQ8IUH8 684 aa14.54□□□□□ -0.08
HDAC6-220ENST00000477528 CPNE9Q8IYJ1 553 aa14.54□□□□□ -0.08
HDAC6-220ENST00000477528 DDHD1Q8NEL9 900 aa14.54□□□□□ -0.08
HDAC6-220ENST00000477528 ZNF711Q9Y462 761 aa14.54□□□□□ -0.08
HDAC6-220ENST00000477528 TTC24A2A3L6 582 aaPredicted RBP14.54□□□□□ -0.08
HDAC6-220ENST00000477528 IFRD1O00458 451 aaPredicted RBP14.54□□□□□ -0.08
HDAC6-220ENST00000477528 S100A5P33763 92 aa14.54□□□□□ -0.08
HDAC6-220ENST00000477528 ADGRE1Q14246 886 aa14.54□□□□□ -0.08
HDAC6-220ENST00000477528 FBXO48Q5FWF7 155 aa14.54□□□□□ -0.08
HDAC6-220ENST00000477528 RNF220Q5VTB9 566 aa14.54□□□□□ -0.08
HDAC6-220ENST00000477528 NPWQ8N729 165 aa14.54□□□□□ -0.08
HDAC6-220ENST00000477528 SIDT2Q8NBJ9 832 aaKnown RBP14.54□□□□□ -0.08
HDAC6-220ENST00000477528 OR10T2Q8NGX3 314 aa14.54□□□□□ -0.08
HDAC6-220ENST00000477528 SPPL2AQ8TCT8 520 aa14.54□□□□□ -0.08
HDAC6-220ENST00000477528 CIB1Q99828 191 aa14.54□□□□□ -0.08
HDAC6-220ENST00000477528 BBS2Q9BXC9 721 aa14.54□□□□□ -0.08
HDAC6-220ENST00000477528 EBF3Q9H4W6 596 aa14.54□□□□□ -0.08
HDAC6-220ENST00000477528 IPPKQ9H8X2 491 aa14.54□□□□□ -0.08
HDAC6-220ENST00000477528 PPM1HQ9ULR3 514 aa14.54□□□□□ -0.08
HDAC6-220ENST00000477528 SNNO75324 88 aaPredicted RBP14.54□□□□□ -0.08
HDAC6-220ENST00000477528 CNTN5O94779 1100 aa14.54□□□□□ -0.08
HDAC6-220ENST00000477528 INHAP05111 366 aa14.54□□□□□ -0.08
HDAC6-220ENST00000477528 CCND3P30281 292 aaPredicted RBP14.54□□□□□ -0.08
HDAC6-220ENST00000477528 GNPDA1P46926 289 aa14.54□□□□□ -0.08
HDAC6-220ENST00000477528 ROR2Q01974 943 aaKnown RBP14.54□□□□□ -0.08
HDAC6-220ENST00000477528 PAGE2BQ5JRK9 111 aa14.54□□□□□ -0.08
HDAC6-220ENST00000477528 MORN1Q5T089 497 aa14.54□□□□□ -0.08
HDAC6-220ENST00000477528 CGB2Q6NT52 195 aa14.54□□□□□ -0.08
HDAC6-220ENST00000477528 TRNP1Q6NT89 227 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms