RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 TYRP1P17643 537 aa6.62□□□□□ -1.35
RTFDC1-206ENST00000477485 AMD1P17707 334 aa6.62□□□□□ -1.35
RTFDC1-206ENST00000477485 HSPA9P38646 679 aaKnown RBP6.62□□□□□ -1.35
RTFDC1-206ENST00000477485 ARL4AP40617 200 aa6.62□□□□□ -1.35
RTFDC1-206ENST00000477485 MMP13P45452 471 aa6.62□□□□□ -1.35
RTFDC1-206ENST00000477485 GFERP55789 205 aa6.62□□□□□ -1.35
RTFDC1-206ENST00000477485 LRP8Q14114 963 aa6.62□□□□□ -1.35
RTFDC1-206ENST00000477485 KRT31Q15323 416 aa6.62□□□□□ -1.35
RTFDC1-206ENST00000477485 SEPT7Q16181 437 aaKnown RBP6.62□□□□□ -1.35
RTFDC1-206ENST00000477485 SMTNL2Q2TAL5 461 aa6.62□□□□□ -1.35
RTFDC1-206ENST00000477485 MARC1Q5VT66 337 aa6.62□□□□□ -1.35
RTFDC1-206ENST00000477485 ACAD10Q6JQN1 1059 aa6.62□□□□□ -1.35
RTFDC1-206ENST00000477485 TMCO3Q6UWJ1 677 aa6.62□□□□□ -1.35
RTFDC1-206ENST00000477485 ADAMTSL4Q6UY14 1074 aa6.62□□□□□ -1.35
RTFDC1-206ENST00000477485 ARHGAP22Q7Z5H3 698 aa6.62□□□□□ -1.35
RTFDC1-206ENST00000477485 PLXDC1Q8IUK5 500 aa6.62□□□□□ -1.35
RTFDC1-206ENST00000477485 PHYKPLQ8IUZ5 450 aa6.62□□□□□ -1.35
RTFDC1-206ENST00000477485 MCOLN2Q8IZK6 566 aa6.62□□□□□ -1.35
RTFDC1-206ENST00000477485 PGBD5Q8N414 524 aa6.62□□□□□ -1.35
RTFDC1-206ENST00000477485 SFRP1Q8N474 314 aa6.62□□□□□ -1.35
RTFDC1-206ENST00000477485 TTC30BQ8N4P2 665 aa6.62□□□□□ -1.35
RTFDC1-206ENST00000477485 ANKRD20A12PQ8NF67 263 aa6.62□□□□□ -1.35
RTFDC1-206ENST00000477485 EXD1Q8NHP7 514 aa6.62□□□□□ -1.35
RTFDC1-206ENST00000477485 CPT1CQ8TCG5 803 aa6.62□□□□□ -1.35
RTFDC1-206ENST00000477485 ZNF653Q96CK0 615 aa6.62□□□□□ -1.35
RTFDC1-206ENST00000477485 SCRN2Q96FV2 425 aa6.62□□□□□ -1.35
RTFDC1-206ENST00000477485 ZNF599Q96NL3 588 aa6.62□□□□□ -1.35
RTFDC1-206ENST00000477485 TGM7Q96PF1 710 aa6.62□□□□□ -1.35
RTFDC1-206ENST00000477485 PEBP4Q96S96 227 aa6.62□□□□□ -1.35
RTFDC1-206ENST00000477485 AGAP2Q99490 1192 aa6.62□□□□□ -1.35
RTFDC1-206ENST00000477485 RIOK2Q9BVS4 552 aaKnown RBP6.62□□□□□ -1.35
RTFDC1-206ENST00000477485 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.62□□□□□ -1.35
RTFDC1-206ENST00000477485 CLSTN2Q9H4D0 955 aa6.62□□□□□ -1.35
RTFDC1-206ENST00000477485 SARS2Q9NP81 518 aaKnown RBP6.62□□□□□ -1.35
RTFDC1-206ENST00000477485 CASS4Q9NQ75 786 aa6.62□□□□□ -1.35
RTFDC1-206ENST00000477485 PARVAQ9NVD7 372 aa6.62□□□□□ -1.35
RTFDC1-206ENST00000477485 RCOR3Q9P2K3 495 aaPredicted RBP6.62□□□□□ -1.35
RTFDC1-206ENST00000477485 TBC1D29Q9UFV1 150 aa6.62□□□□□ -1.35
RTFDC1-206ENST00000477485 TLK1Q9UKI8 766 aa6.62□□□□□ -1.35
RTFDC1-206ENST00000477485 TMEM184BQ9Y519 407 aaPredicted RBP6.62□□□□□ -1.35
RTFDC1-206ENST00000477485 MYO9AB2RTY4 2548 aa6.62□□□□□ -1.35
RTFDC1-206ENST00000477485 SHANK1Q9Y566 2161 aa6.61□□□□□ -1.35
RTFDC1-206ENST00000477485 ESPL1Q14674 2120 aa6.61□□□□□ -1.35
RTFDC1-206ENST00000477485 CLEC18AA5D8T8 446 aa6.61□□□□□ -1.35
RTFDC1-206ENST00000477485 ENO4A6NNW6 628 aa6.61□□□□□ -1.35
RTFDC1-206ENST00000477485 EIF3CLB5ME19 914 aaKnown RBP6.61□□□□□ -1.35
RTFDC1-206ENST00000477485 HTRA2O43464 458 aaPredicted RBP6.61□□□□□ -1.35
RTFDC1-206ENST00000477485 MTA2O94776 668 aa6.61□□□□□ -1.35
RTFDC1-206ENST00000477485 DLGAP3O95886 979 aa6.61□□□□□ -1.35
RTFDC1-206ENST00000477485 VIPP01282 170 aa6.61□□□□□ -1.35
RTFDC1-206ENST00000477485 PDHA1P08559 390 aa6.61□□□□□ -1.35
RTFDC1-206ENST00000477485 FURINP09958 794 aa6.61□□□□□ -1.35
RTFDC1-206ENST00000477485 CCDC172P0C7W6 258 aa6.61□□□□□ -1.35
RTFDC1-206ENST00000477485 AMPD1P23109 780 aa6.61□□□□□ -1.35
RTFDC1-206ENST00000477485 F8A1P23610 371 aa6.61□□□□□ -1.35
RTFDC1-206ENST00000477485 TEAD1P28347 426 aa6.61□□□□□ -1.35
RTFDC1-206ENST00000477485 MIPP30301 263 aa6.61□□□□□ -1.35
RTFDC1-206ENST00000477485 SSR1P43307 286 aaKnown RBP6.61□□□□□ -1.35
RTFDC1-206ENST00000477485 EPHA4P54764 986 aa6.61□□□□□ -1.35
RTFDC1-206ENST00000477485 SH3BP2P78314 561 aa6.61□□□□□ -1.35
RTFDC1-206ENST00000477485 UBXN1Q04323 297 aa6.61□□□□□ -1.35
RTFDC1-206ENST00000477485 DPTQ07507 201 aa6.61□□□□□ -1.35
RTFDC1-206ENST00000477485 CHAF1BQ13112 559 aa6.61□□□□□ -1.35
RTFDC1-206ENST00000477485 SQSTM1Q13501 440 aa6.61□□□□□ -1.35
RTFDC1-206ENST00000477485 INSCQ1MX18 579 aa6.61□□□□□ -1.35
RTFDC1-206ENST00000477485 TDRD12Q587J7 1177 aaKnown RBP6.61□□□□□ -1.35
RTFDC1-206ENST00000477485 PPP1R15BQ5SWA1 713 aa6.61□□□□□ -1.35
RTFDC1-206ENST00000477485 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.61□□□□□ -1.35
RTFDC1-206ENST00000477485 TCTN3Q6NUS6 607 aa6.61□□□□□ -1.35
RTFDC1-206ENST00000477485 IRGCQ6NXR0 463 aa6.61□□□□□ -1.35
RTFDC1-206ENST00000477485 CRTC3Q6UUV7 619 aa6.61□□□□□ -1.35
RTFDC1-206ENST00000477485 CLEC18BQ6UXF7 455 aa6.61□□□□□ -1.35
RTFDC1-206ENST00000477485 FAM92BQ6ZTR7 304 aa6.61□□□□□ -1.35
RTFDC1-206ENST00000477485 CLEC18CQ8NCF0 446 aa6.61□□□□□ -1.35
RTFDC1-206ENST00000477485 LPCAT1Q8NF37 534 aa6.61□□□□□ -1.35
RTFDC1-206ENST00000477485 SSC4DQ8WTU2 575 aa6.61□□□□□ -1.35
RTFDC1-206ENST00000477485 EIF3CQ99613 913 aaKnown RBP6.61□□□□□ -1.35
RTFDC1-206ENST00000477485 MGME1Q9BQP7 344 aa6.61□□□□□ -1.35
RTFDC1-206ENST00000477485 HERPUD2Q9BSE4 406 aa6.61□□□□□ -1.35
RTFDC1-206ENST00000477485 NUP62CLQ9H1M0 184 aa6.61□□□□□ -1.35
RTFDC1-206ENST00000477485 ARFGAP3Q9NP61 516 aa6.61□□□□□ -1.35
RTFDC1-206ENST00000477485 ACSS2Q9NR19 701 aa6.61□□□□□ -1.35
RTFDC1-206ENST00000477485 KLC4Q9NSK0 619 aa6.61□□□□□ -1.35
RTFDC1-206ENST00000477485 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.61□□□□□ -1.35
RTFDC1-206ENST00000477485 TAS2R14Q9NYV8 317 aa6.61□□□□□ -1.35
RTFDC1-206ENST00000477485 CWC15Q9P013 229 aaKnown RBP6.61□□□□□ -1.35
RTFDC1-206ENST00000477485 LUZP4Q9P127 313 aa6.61□□□□□ -1.35
RTFDC1-206ENST00000477485 MYO1AQ9UBC5 1043 aa6.61□□□□□ -1.35
RTFDC1-206ENST00000477485 CPNE7Q9UBL6 633 aa6.61□□□□□ -1.35
RTFDC1-206ENST00000477485 KCND3Q9UK17 655 aa6.61□□□□□ -1.35
RTFDC1-206ENST00000477485 CHKBQ9Y259 395 aa6.61□□□□□ -1.35
RTFDC1-206ENST00000477485 DNAJC16Q9Y2G8 782 aa6.61□□□□□ -1.35
RTFDC1-206ENST00000477485 PCYT1BQ9Y5K3 369 aaPredicted RBP6.61□□□□□ -1.35
RTFDC1-206ENST00000477485 RP1L1Q8IWN7 2480 aaPredicted RBP6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 NBPF19A0A087WUL8 3843 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 KIR2DS5A0A0G2JLQ3 304 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 A0A0G2JNG1 304 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 A0A0J9YYE9 177 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 C1orf232A0A0U1RR37 186 aa6.6□□□□□ -1.35
RTFDC1-206ENST00000477485 TCRBV5S1A1TA0A578 114 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms