RNA–Protein interactions for RNA: ENST00000477403.1

RPL39-203, Transcript of ribosomal protein L39, humanhuman

TSL 3

Gene RPL39, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-203ENST00000477403 HIST1H2AAQ96QV6 131 aa3.93□□□□□ -1.78
RPL39-203ENST00000477403 TSPAN18Q96SJ8 248 aa3.93□□□□□ -1.78
RPL39-203ENST00000477403 MAP7D2Q96T17 732 aa3.93□□□□□ -1.78
RPL39-203ENST00000477403 BAG1Q99933 345 aaPredicted RBP3.93□□□□□ -1.78
RPL39-203ENST00000477403 TMEM175Q9BSA9 504 aa3.93□□□□□ -1.78
RPL39-203ENST00000477403 SPZ1Q9BXG8 430 aa3.93□□□□□ -1.78
RPL39-203ENST00000477403 NT5C3AQ9H0P0 336 aa3.93□□□□□ -1.78
RPL39-203ENST00000477403 LTB4R2Q9NPC1 389 aa3.93□□□□□ -1.78
RPL39-203ENST00000477403 PRMT8Q9NR22 394 aaPredicted RBP3.93□□□□□ -1.78
RPL39-203ENST00000477403 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.93□□□□□ -1.78
RPL39-203ENST00000477403 NRBP2Q9NSY0 501 aa3.93□□□□□ -1.78
RPL39-203ENST00000477403 TBC1D23Q9NUY8 699 aa3.93□□□□□ -1.78
RPL39-203ENST00000477403 TMEM160Q9NX00 188 aa3.93□□□□□ -1.78
RPL39-203ENST00000477403 NKX1-2Q9UD57 310 aaPredicted RBP3.93□□□□□ -1.78
RPL39-203ENST00000477403 RIMKLBQ9ULI2 386 aa3.93□□□□□ -1.78
RPL39-203ENST00000477403 SETXQ7Z333 2677 aaKnown RBP3.93□□□□□ -1.78
RPL39-203ENST00000477403 ERICH2A1L162 156 aa3.92□□□□□ -1.78
RPL39-203ENST00000477403 HIP1O00291 1037 aa3.92□□□□□ -1.78
RPL39-203ENST00000477403 PODXLO00592 558 aa3.92□□□□□ -1.78
RPL39-203ENST00000477403 ADAM10O14672 748 aa3.92□□□□□ -1.78
RPL39-203ENST00000477403 VTNP04004 478 aa3.92□□□□□ -1.78
RPL39-203ENST00000477403 HNRNPA1P09651 372 aaKnown RBP eCLIP3.92□□□□□ -1.78
RPL39-203ENST00000477403 ALOX12P18054 663 aa3.92□□□□□ -1.78
RPL39-203ENST00000477403 BTF3P20290 206 aaKnown RBP3.92□□□□□ -1.78
RPL39-203ENST00000477403 HOXA6P31267 233 aa3.92□□□□□ -1.78
RPL39-203ENST00000477403 KIF5BP33176 963 aa3.92□□□□□ -1.78
RPL39-203ENST00000477403 MCM5P33992 734 aa3.92□□□□□ -1.78
RPL39-203ENST00000477403 ACTN2P35609 894 aa3.92□□□□□ -1.78
RPL39-203ENST00000477403 PAPOLAP51003 745 aaKnown RBP3.92□□□□□ -1.78
RPL39-203ENST00000477403 CCR3P51677 355 aa3.92□□□□□ -1.78
RPL39-203ENST00000477403 VAMP2P63027 116 aa3.92□□□□□ -1.78
RPL39-203ENST00000477403 PLIN5Q00G26 463 aa3.92□□□□□ -1.78
RPL39-203ENST00000477403 DEUP1Q05D60 604 aa3.92□□□□□ -1.78
RPL39-203ENST00000477403 KCNB1Q14721 858 aa3.92□□□□□ -1.78
RPL39-203ENST00000477403 TSTQ16762 297 aaKnown RBP3.92□□□□□ -1.78
RPL39-203ENST00000477403 N4BP2L1Q5TBK1 243 aaPredicted RBP3.92□□□□□ -1.78
RPL39-203ENST00000477403 NUGGCQ68CJ6 796 aa3.92□□□□□ -1.78
RPL39-203ENST00000477403 PLAG1Q6DJT9 500 aa3.92□□□□□ -1.78
RPL39-203ENST00000477403 CLEC9AQ6UXN8 241 aa3.92□□□□□ -1.78
RPL39-203ENST00000477403 BEND5Q7L4P6 421 aa3.92□□□□□ -1.78
RPL39-203ENST00000477403 TMEM173Q86WV6 379 aaPredicted RBP3.92□□□□□ -1.78
RPL39-203ENST00000477403 METTL25Q8N6Q8 603 aa3.92□□□□□ -1.78
RPL39-203ENST00000477403 NANOGP1Q8N7R0 232 aa3.92□□□□□ -1.78
RPL39-203ENST00000477403 URGCPQ8TCY9 931 aa3.92□□□□□ -1.78
RPL39-203ENST00000477403 ZNF707Q96C28 371 aaPredicted RBP3.92□□□□□ -1.78
RPL39-203ENST00000477403 IQCDQ96DY2 449 aa3.92□□□□□ -1.78
RPL39-203ENST00000477403 TIGD1Q96MW7 591 aa3.92□□□□□ -1.78
RPL39-203ENST00000477403 GCOM2Q9BZD3 368 aaPredicted RBP3.92□□□□□ -1.78
RPL39-203ENST00000477403 PAIP1Q9H074 479 aaKnown RBP3.92□□□□□ -1.78
RPL39-203ENST00000477403 GLT8D2Q9H1C3 349 aa3.92□□□□□ -1.78
RPL39-203ENST00000477403 LY9Q9HBG7 655 aa3.92□□□□□ -1.78
RPL39-203ENST00000477403 USP29Q9HBJ7 922 aa3.92□□□□□ -1.78
RPL39-203ENST00000477403 RRAGDQ9NQL2 400 aaPredicted RBP3.92□□□□□ -1.78
RPL39-203ENST00000477403 ZNF302Q9NR11 478 aa3.92□□□□□ -1.78
RPL39-203ENST00000477403 TBC1D13Q9NVG8 400 aa3.92□□□□□ -1.78
RPL39-203ENST00000477403 DKK4Q9UBT3 224 aa3.92□□□□□ -1.78
RPL39-203ENST00000477403 ZNF212Q9UDV6 495 aa3.92□□□□□ -1.78
RPL39-203ENST00000477403 SEC63Q9UGP8 760 aaKnown RBP3.92□□□□□ -1.78
RPL39-203ENST00000477403 VPS28Q9UK41 221 aa3.92□□□□□ -1.78
RPL39-203ENST00000477403 CDH7Q9ULB5 785 aa3.92□□□□□ -1.78
RPL39-203ENST00000477403 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.92□□□□□ -1.78
RPL39-203ENST00000477403 ZZEF1O43149 2961 aa3.92□□□□□ -1.78
RPL39-203ENST00000477403 NLRC5Q86WI3 1866 aa3.92□□□□□ -1.78
RPL39-203ENST00000477403 KIAA1217Q5T5P2 1943 aa3.91□□□□□ -1.78
RPL39-203ENST00000477403 GTPBP10A4D1E9 387 aaKnown RBP3.91□□□□□ -1.78
RPL39-203ENST00000477403 H7C0S8 307 aa3.91□□□□□ -1.78
RPL39-203ENST00000477403 IFIT3O14879 490 aaKnown RBP3.91□□□□□ -1.78
RPL39-203ENST00000477403 PIP5K1BO14986 540 aa3.91□□□□□ -1.78
RPL39-203ENST00000477403 TEX28O15482 410 aa3.91□□□□□ -1.78
RPL39-203ENST00000477403 PTP4A3O75365 173 aa3.91□□□□□ -1.78
RPL39-203ENST00000477403 ECI2O75521 394 aa3.91□□□□□ -1.78
RPL39-203ENST00000477403 RFPL2O75678 378 aa3.91□□□□□ -1.78
RPL39-203ENST00000477403 PAPSS2O95340 614 aaPredicted RBP3.91□□□□□ -1.78
RPL39-203ENST00000477403 BAG4O95429 457 aaKnown RBP3.91□□□□□ -1.78
RPL39-203ENST00000477403 NDST3O95803 873 aa3.91□□□□□ -1.78
RPL39-203ENST00000477403 CCNE2O96020 404 aa3.91□□□□□ -1.78
RPL39-203ENST00000477403 ANXA2P07355 339 aaKnown RBP3.91□□□□□ -1.78
RPL39-203ENST00000477403 ADRB2P07550 413 aa3.91□□□□□ -1.78
RPL39-203ENST00000477403 ZNF806P0C7X5 589 aa3.91□□□□□ -1.78
RPL39-203ENST00000477403 MYL4P12829 197 aa3.91□□□□□ -1.78
RPL39-203ENST00000477403 TDGF1P13385 188 aa3.91□□□□□ -1.78
RPL39-203ENST00000477403 MUTP22033 750 aa3.91□□□□□ -1.78
RPL39-203ENST00000477403 PSMA3P25788 255 aa3.91□□□□□ -1.78
RPL39-203ENST00000477403 HOXA9P31269 272 aa3.91□□□□□ -1.78
RPL39-203ENST00000477403 HOXD13P35453 343 aa3.91□□□□□ -1.78
RPL39-203ENST00000477403 PIK3CAP42336 1068 aa3.91□□□□□ -1.78
RPL39-203ENST00000477403 CXCL12P48061 93 aa3.91□□□□□ -1.78
RPL39-203ENST00000477403 POLD2P49005 469 aa3.91□□□□□ -1.78
RPL39-203ENST00000477403 SLC11A1P49279 550 aa3.91□□□□□ -1.78
RPL39-203ENST00000477403 GLUD2P49448 558 aa3.91□□□□□ -1.78
RPL39-203ENST00000477403 GPC3P51654 580 aa3.91□□□□□ -1.78
RPL39-203ENST00000477403 SNX16P57768 344 aa3.91□□□□□ -1.78
RPL39-203ENST00000477403 CDC16Q13042 620 aa3.91□□□□□ -1.78
RPL39-203ENST00000477403 MTAPQ13126 283 aa3.91□□□□□ -1.78
RPL39-203ENST00000477403 ITGB3BPQ13352 177 aaPredicted RBP3.91□□□□□ -1.78
RPL39-203ENST00000477403 MFSD13AQ14CX5 517 aa3.91□□□□□ -1.78
RPL39-203ENST00000477403 SMAD1Q15797 465 aaKnown RBP3.91□□□□□ -1.78
RPL39-203ENST00000477403 RILPL1Q5EBL4 403 aa3.91□□□□□ -1.78
RPL39-203ENST00000477403 TWF2Q6IBS0 349 aaKnown RBP3.91□□□□□ -1.78
RPL39-203ENST00000477403 ACAD10Q6JQN1 1059 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms