RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-231	ENST00000477334	GOLGA6L9	A6NEM1	432 aa		4.2	□□□□□ -1.74
RBM39-231	ENST00000477334	C4orf47	A7E2U8	309 aa		4.2	□□□□□ -1.74
RBM39-231	ENST00000477334	HS6ST1	O60243	411 aa		4.2	□□□□□ -1.74
RBM39-231	ENST00000477334	DDN	O94850	711 aa	Predicted RBP	4.2	□□□□□ -1.74
RBM39-231	ENST00000477334	PPP1R3D	O95685	299 aa		4.2	□□□□□ -1.74
RBM39-231	ENST00000477334	ICAM1	P05362	532 aa		4.2	□□□□□ -1.74
RBM39-231	ENST00000477334	DAO	P14920	347 aa		4.2	□□□□□ -1.74
RBM39-231	ENST00000477334	TMEM11	P17152	192 aa		4.2	□□□□□ -1.74
RBM39-231	ENST00000477334	GABRB1	P18505	474 aa		4.2	□□□□□ -1.74
RBM39-231	ENST00000477334	TMPO	P42166	694 aa	Known RBP	4.2	□□□□□ -1.74
RBM39-231	ENST00000477334	CAMP	P49913	170 aa		4.2	□□□□□ -1.74
RBM39-231	ENST00000477334	CLNS1A	P54105	237 aa	Known RBP	4.2	□□□□□ -1.74
RBM39-231	ENST00000477334	NLRP5	P59047	1200 aa		4.2	□□□□□ -1.74
RBM39-231	ENST00000477334	MRPS34	P82930	218 aa	Known RBP	4.2	□□□□□ -1.74
RBM39-231	ENST00000477334	CREB5	Q02930	508 aa		4.2	□□□□□ -1.74
RBM39-231	ENST00000477334	MAD2L1	Q13257	205 aa	Predicted RBP	4.2	□□□□□ -1.74
RBM39-231	ENST00000477334	ASIC2	Q16515	512 aa		4.2	□□□□□ -1.74
RBM39-231	ENST00000477334	SOWAHC	Q53LP3	525 aa	Predicted RBP	4.2	□□□□□ -1.74
RBM39-231	ENST00000477334	ZNF805	Q5CZA5	627 aa		4.2	□□□□□ -1.74
RBM39-231	ENST00000477334	C9orf57	Q5W0N0	161 aa		4.2	□□□□□ -1.74
RBM39-231	ENST00000477334	TMEM198	Q66K66	360 aa		4.2	□□□□□ -1.74
RBM39-231	ENST00000477334	PMS2CL	Q68D20	193 aa		4.2	□□□□□ -1.74
RBM39-231	ENST00000477334	KIAA1161	Q6NSJ0	714 aa		4.2	□□□□□ -1.74
RBM39-231	ENST00000477334	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	4.2	□□□□□ -1.74	6e-19	■■■■■ 56.7
RBM39-231	ENST00000477334	FASTKD5	Q7L8L6	764 aa	Known RBP	4.2	□□□□□ -1.74
RBM39-231	ENST00000477334	ODF3L1	Q8IXM7	274 aa		4.2	□□□□□ -1.74
RBM39-231	ENST00000477334	LMO3	Q8TAP4	145 aa		4.2	□□□□□ -1.74
RBM39-231	ENST00000477334	HM13	Q8TCT9	377 aa		4.2	□□□□□ -1.74
RBM39-231	ENST00000477334	FAM120B	Q96EK7	910 aa	Known RBP	4.2	□□□□□ -1.74
RBM39-231	ENST00000477334	TMEM19	Q96HH6	336 aa		4.2	□□□□□ -1.74
RBM39-231	ENST00000477334	EGLN2	Q96KS0	407 aa		4.2	□□□□□ -1.74
RBM39-231	ENST00000477334	OR2A14	Q96R47	310 aa		4.2	□□□□□ -1.74
RBM39-231	ENST00000477334	PCDH9	Q9HC56	1237 aa		4.2	□□□□□ -1.74
RBM39-231	ENST00000477334	MTMR10	Q9NXD2	777 aa		4.2	□□□□□ -1.74
RBM39-231	ENST00000477334	MCM9	Q9NXL9	1143 aa		4.2	□□□□□ -1.74
RBM39-231	ENST00000477334	ZNF224	Q9NZL3	707 aa		4.2	□□□□□ -1.74
RBM39-231	ENST00000477334	STK39	Q9UEW8	545 aa		4.2	□□□□□ -1.74
RBM39-231	ENST00000477334	ADD3	Q9UEY8	706 aa	Known RBP	4.2	□□□□□ -1.74
RBM39-231	ENST00000477334	FBXL17	Q9UF56	701 aa		4.2	□□□□□ -1.74
RBM39-231	ENST00000477334	FBXW11	Q9UKB1	542 aa		4.2	□□□□□ -1.74
RBM39-231	ENST00000477334	PADI3	Q9ULW8	664 aa		4.2	□□□□□ -1.74
RBM39-231	ENST00000477334	NENF	Q9UMX5	172 aa		4.2	□□□□□ -1.74
RBM39-231	ENST00000477334	GPR34	Q9UPC5	381 aa		4.2	□□□□□ -1.74
RBM39-231	ENST00000477334	KLHL20	Q9Y2M5	609 aa		4.2	□□□□□ -1.74
RBM39-231	ENST00000477334	PCDHGB1	Q9Y5G3	927 aa		4.2	□□□□□ -1.74
RBM39-231	ENST00000477334	RSF1	Q96T23	1441 aa	Predicted RBP	4.2	□□□□□ -1.74
RBM39-231	ENST00000477334	PDS5A	Q29RF7	1337 aa	Known RBP	4.2	□□□□□ -1.74
RBM39-231	ENST00000477334	SAA2-SAA4	A0A096LPE2	208 aa		4.19	□□□□□ -1.74
RBM39-231	ENST00000477334		A0A0G2JPF8	293 aa		4.19	□□□□□ -1.74
RBM39-231	ENST00000477334	PLSCR5	A0PG75	271 aa		4.19	□□□□□ -1.74
RBM39-231	ENST00000477334	HNRNPCL3	B7ZW38	293 aa		4.19	□□□□□ -1.74
RBM39-231	ENST00000477334	TPPP	O94811	219 aa		4.19	□□□□□ -1.74
RBM39-231	ENST00000477334	SRPRA	P08240	638 aa	Known RBP	4.19	□□□□□ -1.74
RBM39-231	ENST00000477334	HNRNPCL4	P0DMR1	293 aa		4.19	□□□□□ -1.74
RBM39-231	ENST00000477334	CORO1A	P31146	461 aa	Known RBP	4.19	□□□□□ -1.74
RBM39-231	ENST00000477334	PSMB10	P40306	273 aa		4.19	□□□□□ -1.74
RBM39-231	ENST00000477334	TAS2R38	P59533	333 aa		4.19	□□□□□ -1.74
RBM39-231	ENST00000477334	PDE1B	Q01064	536 aa		4.19	□□□□□ -1.74
RBM39-231	ENST00000477334	EEF1A2	Q05639	463 aa	Known RBP	4.19	□□□□□ -1.74
RBM39-231	ENST00000477334	SLC20A2	Q08357	652 aa		4.19	□□□□□ -1.74
RBM39-231	ENST00000477334	LRMP	Q12912	555 aa		4.19	□□□□□ -1.74
RBM39-231	ENST00000477334	IRF3	Q14653	427 aa		4.19	□□□□□ -1.74
RBM39-231	ENST00000477334	DECR1	Q16698	335 aa		4.19	□□□□□ -1.74
RBM39-231	ENST00000477334	KIF19	Q2TAC6	998 aa		4.19	□□□□□ -1.74
RBM39-231	ENST00000477334	PCGF3	Q3KNV8	242 aa		4.19	□□□□□ -1.74
RBM39-231	ENST00000477334	DUSP28	Q4G0W2	176 aa		4.19	□□□□□ -1.74
RBM39-231	ENST00000477334	FAM122C	Q6P4D5	195 aa		4.19	□□□□□ -1.74
RBM39-231	ENST00000477334	CFAP77	Q6ZQR2	320 aa		4.19	□□□□□ -1.74
RBM39-231	ENST00000477334	SZRD1	Q7Z422	152 aa		4.19	□□□□□ -1.74
RBM39-231	ENST00000477334	SATL1	Q86VE3	508 aa		4.19	□□□□□ -1.74
RBM39-231	ENST00000477334	NRROS	Q86YC3	692 aa		4.19	□□□□□ -1.74
RBM39-231	ENST00000477334	C17orf53	Q8N3J3	647 aa	Predicted RBP	4.19	□□□□□ -1.74
RBM39-231	ENST00000477334	ACVR1C	Q8NER5	493 aa		4.19	□□□□□ -1.74
RBM39-231	ENST00000477334	OR1J2	Q8NGS2	313 aa		4.19	□□□□□ -1.74
RBM39-231	ENST00000477334	MAGEC3	Q8TD91	643 aa		4.19	□□□□□ -1.74
RBM39-231	ENST00000477334	SLC20A1	Q8WUM9	679 aa		4.19	□□□□□ -1.74
RBM39-231	ENST00000477334	TAAR8	Q969N4	342 aa		4.19	□□□□□ -1.74
RBM39-231	ENST00000477334	BICD1	Q96G01	975 aa		4.19	□□□□□ -1.74
RBM39-231	ENST00000477334	PGAM5	Q96HS1	289 aa		4.19	□□□□□ -1.74
RBM39-231	ENST00000477334	ZNF385A	Q96PM9	386 aa	Known RBP	4.19	□□□□□ -1.74
RBM39-231	ENST00000477334	SMC6	Q96SB8	1091 aa		4.19	□□□□□ -1.74
RBM39-231	ENST00000477334	C1QTNF4	Q9BXJ3	329 aa		4.19	□□□□□ -1.74
RBM39-231	ENST00000477334	KRTAP2-2	Q9BYT5	123 aa		4.19	□□□□□ -1.74
RBM39-231	ENST00000477334	EPB41L5	Q9HCM4	733 aa		4.19	□□□□□ -1.74
RBM39-231	ENST00000477334	OGFR	Q9NZT2	677 aa		4.19	□□□□□ -1.74
RBM39-231	ENST00000477334	PADI1	Q9ULC6	663 aa		4.19	□□□□□ -1.74
RBM39-231	ENST00000477334	VDAC3	Q9Y277	283 aa		4.19	□□□□□ -1.74
RBM39-231	ENST00000477334	ARHGEF40	Q8TER5	1519 aa		4.19	□□□□□ -1.74
RBM39-231	ENST00000477334	hCG_1807616	A0A1W2PRN6	198 aa		4.18	□□□□□ -1.74
RBM39-231	ENST00000477334	KANSL1L	A0AUZ9	987 aa		4.18	□□□□□ -1.74
RBM39-231	ENST00000477334	EIF4E1B	A6NMX2	242 aa	Known RBP	4.18	□□□□□ -1.74
RBM39-231	ENST00000477334	AGAP14	A8MT82	685 aa		4.18	□□□□□ -1.74
RBM39-231	ENST00000477334	HNRNPCL2	B2RXH8	293 aa		4.18	□□□□□ -1.74
RBM39-231	ENST00000477334	ZNF587B	E7ETH6	402 aa		4.18	□□□□□ -1.74
RBM39-231	ENST00000477334	HS3ST1	O14792	307 aa		4.18	□□□□□ -1.74
RBM39-231	ENST00000477334	CLGN	O14967	610 aa		4.18	□□□□□ -1.74
RBM39-231	ENST00000477334	OGG1	O15527	345 aa		4.18	□□□□□ -1.74
RBM39-231	ENST00000477334	GPC4	O75487	556 aa		4.18	□□□□□ -1.74
RBM39-231	ENST00000477334	DAB1	O75553	588 aa		4.18	□□□□□ -1.74
RBM39-231	ENST00000477334	GJB3	O75712	270 aa		4.18	□□□□□ -1.74

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