RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 NLRP8Q86W28 1048 aa15.77■□□□□ 0.12
COPS3-207ENST00000477299 TRAM1L1Q8N609 369 aa15.77■□□□□ 0.12
COPS3-207ENST00000477299 MFSD3Q96ES6 412 aa15.77■□□□□ 0.12
COPS3-207ENST00000477299 FCRL3Q96P31 734 aaPredicted RBP15.77■□□□□ 0.12
COPS3-207ENST00000477299 NUSAP1Q9BXS6 441 aaKnown RBP15.77■□□□□ 0.12
COPS3-207ENST00000477299 ARHGEF17Q96PE2 2063 aaPredicted RBP15.77■□□□□ 0.11
COPS3-207ENST00000477299 PTPRZ1P23471 2315 aaPredicted RBP15.77■□□□□ 0.11
COPS3-207ENST00000477299 GLYATL1P3A0A0U1RQE8 302 aa15.76■□□□□ 0.11
COPS3-207ENST00000477299 HEATR9A2RTY3 570 aa15.76■□□□□ 0.11
COPS3-207ENST00000477299 CDX4O14627 284 aaPredicted RBP15.76■□□□□ 0.11
COPS3-207ENST00000477299 F7P08709 466 aaPredicted RBP15.76■□□□□ 0.11
COPS3-207ENST00000477299 MLNP12872 115 aa15.76■□□□□ 0.11
COPS3-207ENST00000477299 PSMA3P25788 255 aa15.76■□□□□ 0.11
COPS3-207ENST00000477299 MC4RP32245 332 aa15.76■□□□□ 0.11
COPS3-207ENST00000477299 DPP6P42658 865 aa15.76■□□□□ 0.11
COPS3-207ENST00000477299 THOP1P52888 689 aa15.76■□□□□ 0.11
COPS3-207ENST00000477299 DCDC1P59894 354 aa15.76■□□□□ 0.11
COPS3-207ENST00000477299 YPEL5P62699 121 aa15.76■□□□□ 0.11
COPS3-207ENST00000477299 GUCY2DQ02846 1103 aa15.76■□□□□ 0.11
COPS3-207ENST00000477299 NFATC4Q14934 902 aa15.76■□□□□ 0.11
COPS3-207ENST00000477299 MORF4L2Q15014 288 aa15.76■□□□□ 0.11
COPS3-207ENST00000477299 BBS9Q3SYG4 887 aa15.76■□□□□ 0.11
COPS3-207ENST00000477299 RD3Q7Z3Z2 195 aa15.76■□□□□ 0.11
COPS3-207ENST00000477299 PCGF5Q86SE9 256 aa15.76■□□□□ 0.11
COPS3-207ENST00000477299 ALYREFQ86V81 257 aaKnown RBP15.76■□□□□ 0.11
COPS3-207ENST00000477299 HOOK3Q86VS8 718 aa15.76■□□□□ 0.11
COPS3-207ENST00000477299 RAVER1Q8IY67 606 aaKnown RBP15.76■□□□□ 0.11
COPS3-207ENST00000477299 KIAA2013Q8IYS2 634 aa15.76■□□□□ 0.11
COPS3-207ENST00000477299 UNC5BQ8IZJ1 945 aa15.76■□□□□ 0.11
COPS3-207ENST00000477299 RBFAQ8N0V3 343 aa15.76■□□□□ 0.11
COPS3-207ENST00000477299 PPHLN1Q8NEY8 458 aaKnown RBP15.76■□□□□ 0.11
COPS3-207ENST00000477299 STYXQ8WUJ0 223 aa15.76■□□□□ 0.11
COPS3-207ENST00000477299 OR1E3Q8WZA6 343 aa15.76■□□□□ 0.11
COPS3-207ENST00000477299 HDAC10Q969S8 669 aa15.76■□□□□ 0.11
COPS3-207ENST00000477299 COX14Q96I36 57 aa15.76■□□□□ 0.11
COPS3-207ENST00000477299 HIC2Q96JB3 615 aa15.76■□□□□ 0.11
COPS3-207ENST00000477299 PLEKHG4BQ96PX9 1271 aa15.76■□□□□ 0.11
COPS3-207ENST00000477299 IL22Q9GZX6 179 aa15.76■□□□□ 0.11
COPS3-207ENST00000477299 GAREM1Q9H706 876 aa15.76■□□□□ 0.11
COPS3-207ENST00000477299 WDR26Q9H7D7 661 aa15.76■□□□□ 0.11
COPS3-207ENST00000477299 PLAC1Q9HBJ0 212 aa15.76■□□□□ 0.11
COPS3-207ENST00000477299 EPB41L5Q9HCM4 733 aa15.76■□□□□ 0.11
COPS3-207ENST00000477299 XAB2Q9HCS7 855 aaKnown RBP15.76■□□□□ 0.11
COPS3-207ENST00000477299 FGF22Q9HCT0 170 aa15.76■□□□□ 0.11
COPS3-207ENST00000477299 TREX1Q9NSU2 369 aa15.76■□□□□ 0.11
COPS3-207ENST00000477299 IL1RAPL1Q9NZN1 696 aa15.76■□□□□ 0.11
COPS3-207ENST00000477299 WHRNQ9P202 907 aa15.76■□□□□ 0.11
COPS3-207ENST00000477299 NFKBIL1Q9UBC1 381 aaPredicted RBP15.76■□□□□ 0.11
COPS3-207ENST00000477299 PLEKHM1Q9Y4G2 1056 aa15.76■□□□□ 0.11
COPS3-207ENST00000477299 ZNF292O60281 2723 aa15.75■□□□□ 0.11
COPS3-207ENST00000477299 SDR42E2A6NKP2 422 aa15.75■□□□□ 0.11
COPS3-207ENST00000477299 SDC3O75056 442 aa15.75■□□□□ 0.11
COPS3-207ENST00000477299 SRP72O76094 671 aaKnown RBP15.75■□□□□ 0.11
COPS3-207ENST00000477299 CEACAM5P06731 702 aa15.75■□□□□ 0.11
COPS3-207ENST00000477299 CELA2BP08218 269 aaPredicted RBP15.75■□□□□ 0.11
COPS3-207ENST00000477299 RHOXF2BP0C7M4 288 aa15.75■□□□□ 0.11
COPS3-207ENST00000477299 PLTPP55058 493 aa15.75■□□□□ 0.11
COPS3-207ENST00000477299 SARNPP82979 210 aaKnown RBP15.75■□□□□ 0.11
COPS3-207ENST00000477299 SEMA3AQ14563 771 aa15.75■□□□□ 0.11
COPS3-207ENST00000477299 FASTKD3Q14CZ7 662 aaKnown RBP15.75■□□□□ 0.11
COPS3-207ENST00000477299 ZNF423Q2M1K9 1284 aa15.75■□□□□ 0.11
COPS3-207ENST00000477299 ALG11Q2TAA5 492 aa15.75■□□□□ 0.11
COPS3-207ENST00000477299 PSAPL1Q6NUJ1 521 aa15.75■□□□□ 0.11
COPS3-207ENST00000477299 MARK2Q7KZI7 788 aaKnown RBP15.75■□□□□ 0.11
COPS3-207ENST00000477299 LDB1Q86U70 411 aaPredicted RBP15.75■□□□□ 0.11
COPS3-207ENST00000477299 ANKMY2Q8IV38 441 aa15.75■□□□□ 0.11
COPS3-207ENST00000477299 PIANPQ8IYJ0 282 aa15.75■□□□□ 0.11
COPS3-207ENST00000477299 MINDY1Q8N5J2 469 aa15.75■□□□□ 0.11
COPS3-207ENST00000477299 FBXO25Q8TCJ0 367 aa15.75■□□□□ 0.11
COPS3-207ENST00000477299 ZNF398Q8TD17 642 aa15.75■□□□□ 0.11
COPS3-207ENST00000477299 ART4Q93070 314 aa15.75■□□□□ 0.11
COPS3-207ENST00000477299 PDXPQ96GD0 296 aa15.75■□□□□ 0.11
COPS3-207ENST00000477299 RHOXF2Q9BQY4 288 aa15.75■□□□□ 0.11
COPS3-207ENST00000477299 KIFC1Q9BW19 673 aa15.75■□□□□ 0.11
COPS3-207ENST00000477299 FRMD8Q9BZ67 464 aaPredicted RBP15.75■□□□□ 0.11
COPS3-207ENST00000477299 ASB8Q9H765 288 aa15.75■□□□□ 0.11
COPS3-207ENST00000477299 GDF3Q9NR23 364 aa15.75■□□□□ 0.11
COPS3-207ENST00000477299 DNAJC28Q9NX36 388 aa15.75■□□□□ 0.11
COPS3-207ENST00000477299 KCTD5Q9NXV2 234 aa15.75■□□□□ 0.11
COPS3-207ENST00000477299 SOX13Q9UN79 622 aa15.75■□□□□ 0.11
COPS3-207ENST00000477299 UTP11Q9Y3A2 253 aaKnown RBP15.75■□□□□ 0.11
COPS3-207ENST00000477299 PRKAB1Q9Y478 270 aa15.75■□□□□ 0.11
COPS3-207ENST00000477299 GOLGA8KD6RF30 607 aa15.74■□□□□ 0.11
COPS3-207ENST00000477299 GOLGA8TH3BQL2 631 aa15.74■□□□□ 0.11
COPS3-207ENST00000477299 CACNB4O00305 520 aaPredicted RBP15.74■□□□□ 0.11
COPS3-207ENST00000477299 LRP3O75074 770 aa15.74■□□□□ 0.11
COPS3-207ENST00000477299 PRAMEF1O95521 474 aa15.74■□□□□ 0.11
COPS3-207ENST00000477299 MYCLP1P12525 358 aaPredicted RBP15.74■□□□□ 0.11
COPS3-207ENST00000477299 ARNTP27540 789 aa15.74■□□□□ 0.11
COPS3-207ENST00000477299 TEAD1P28347 426 aa15.74■□□□□ 0.11
COPS3-207ENST00000477299 ELK3P41970 407 aa15.74■□□□□ 0.11
COPS3-207ENST00000477299 KIAA1024LP59773 190 aa15.74■□□□□ 0.11
COPS3-207ENST00000477299 ACVR1Q04771 509 aa15.74■□□□□ 0.11
COPS3-207ENST00000477299 SKIDA1Q1XH10 827 aa15.74■□□□□ 0.11
COPS3-207ENST00000477299 ZRANB3Q5FWF4 1079 aa15.74■□□□□ 0.11
COPS3-207ENST00000477299 CASC4Q6P4E1 433 aa15.74■□□□□ 0.11
COPS3-207ENST00000477299 MACC1Q6ZN28 852 aa15.74■□□□□ 0.11
COPS3-207ENST00000477299 RABEPKQ7Z6M1 372 aa15.74■□□□□ 0.11
COPS3-207ENST00000477299 GATAD2AQ86YP4 633 aa15.74■□□□□ 0.11
COPS3-207ENST00000477299 HID1Q8IV36 788 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms