RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 TNFAIP3P21580 790 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 MAN1A1P33908 653 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 RFC1P35251 1148 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-214ENST00000477152 UGT1A5P35504 534 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 AP1S1P61966 158 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 HSP90AA4PQ58FG1 418 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 TRNP1Q6NT89 227 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 CRTC1Q6UUV9 634 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 SRLQ86TD4 932 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 CDH24Q86UP0 819 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 PSTKQ8IV42 348 aaKnown RBP7.28□□□□□ -1.24
BRCA1-214ENST00000477152 CCDC185Q8N715 623 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 FAM46DQ8NEK8 389 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 PCDH19Q8TAB3 1148 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 SLC20A1Q8WUM9 679 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 UTP4Q969X6 686 aaKnown RBP7.28□□□□□ -1.24
BRCA1-214ENST00000477152 TSACCQ96A04 125 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-214ENST00000477152 SCARF2Q96GP6 870 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-214ENST00000477152 CCDC74BQ96LY2 380 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 RBM15Q96T37 977 aaKnown RBP eCLIP7.28□□□□□ -1.24
BRCA1-214ENST00000477152 GANQ9H2C0 597 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 PCDH12Q9NPG4 1184 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 SAMSN1Q9NSI8 373 aaKnown RBP7.28□□□□□ -1.24
BRCA1-214ENST00000477152 PARVAQ9NVD7 372 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 MOSPD1Q9UJG1 213 aa7.28□□□□□ -1.24
BRCA1-214ENST00000477152 ANKRD36A6QL64 1941 aa7.27□□□□□ -1.25
BRCA1-214ENST00000477152 ASXL3Q9C0F0 2248 aa7.27□□□□□ -1.25
BRCA1-214ENST00000477152 PTPRQQ9UMZ3 2332 aa7.27□□□□□ -1.25
BRCA1-214ENST00000477152 NBEAQ8NFP9 2946 aa7.27□□□□□ -1.25
BRCA1-214ENST00000477152 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.27□□□□□ -1.25
BRCA1-214ENST00000477152 RHPN2P1A8MT19 583 aa7.27□□□□□ -1.25
BRCA1-214ENST00000477152 C9orf172C9J069 976 aa7.27□□□□□ -1.25
BRCA1-214ENST00000477152 CCP110O43303 1012 aa7.27□□□□□ -1.25
BRCA1-214ENST00000477152 NUDT21O43809 227 aaKnown RBP7.27□□□□□ -1.25
BRCA1-214ENST00000477152 SLC28A2O43868 658 aa7.27□□□□□ -1.25
BRCA1-214ENST00000477152 PRPSAP2O60256 369 aa7.27□□□□□ -1.25
BRCA1-214ENST00000477152 PRAMEF11O60813 436 aa7.27□□□□□ -1.25
BRCA1-214ENST00000477152 SLITRK5O94991 958 aa7.27□□□□□ -1.25
BRCA1-214ENST00000477152 SLC5A2P31639 672 aa7.27□□□□□ -1.25
BRCA1-214ENST00000477152 JAM2P57087 298 aa7.27□□□□□ -1.25
BRCA1-214ENST00000477152 CCL7P80098 99 aa7.27□□□□□ -1.25
BRCA1-214ENST00000477152 UBXN1Q04323 297 aa7.27□□□□□ -1.25
BRCA1-214ENST00000477152 ILF3Q12906 894 aaKnown RBP eCLIP7.27□□□□□ -1.25
BRCA1-214ENST00000477152 ALG11Q2TAA5 492 aa7.27□□□□□ -1.25
BRCA1-214ENST00000477152 WSCD2Q2TBF2 565 aa7.27□□□□□ -1.25
BRCA1-214ENST00000477152 MAP9Q49MG5 647 aa7.27□□□□□ -1.25
BRCA1-214ENST00000477152 C14orf28Q4W4Y0 310 aa7.27□□□□□ -1.25
BRCA1-214ENST00000477152 RALGPS1Q5JS13 557 aa7.27□□□□□ -1.25
BRCA1-214ENST00000477152 ERMARDQ5T6L9 678 aa7.27□□□□□ -1.25
BRCA1-214ENST00000477152 LEKR1Q6ZMV7 388 aa7.27□□□□□ -1.25
BRCA1-214ENST00000477152 PIM3Q86V86 326 aa7.27□□□□□ -1.25
BRCA1-214ENST00000477152 KYQ8NBH2 561 aa7.27□□□□□ -1.25
BRCA1-214ENST00000477152 JOSD2Q8TAC2 188 aa7.27□□□□□ -1.25
BRCA1-214ENST00000477152 ZNF599Q96NL3 588 aa7.27□□□□□ -1.25
BRCA1-214ENST00000477152 MCEEQ96PE7 176 aa7.27□□□□□ -1.25
BRCA1-214ENST00000477152 MIPEPQ99797 713 aa7.27□□□□□ -1.25
BRCA1-214ENST00000477152 AGPAT1Q99943 283 aa7.27□□□□□ -1.25
BRCA1-214ENST00000477152 CEP41Q9BYV8 373 aa7.27□□□□□ -1.25
BRCA1-214ENST00000477152 CLPBQ9H078 707 aa7.27□□□□□ -1.25
BRCA1-214ENST00000477152 NAT10Q9H0A0 1025 aaKnown RBP7.27□□□□□ -1.25
BRCA1-214ENST00000477152 DPEP2Q9H4A9 486 aa7.27□□□□□ -1.25
BRCA1-214ENST00000477152 STN1Q9H668 368 aaKnown RBP7.27□□□□□ -1.25
BRCA1-214ENST00000477152 WDR26Q9H7D7 661 aa7.27□□□□□ -1.25
BRCA1-214ENST00000477152 ZWILCHQ9H900 591 aa7.27□□□□□ -1.25
BRCA1-214ENST00000477152 MBNL1Q9NR56 388 aaKnown RBP7.27□□□□□ -1.25
BRCA1-214ENST00000477152 ANO10Q9NW15 660 aa7.27□□□□□ -1.25
BRCA1-214ENST00000477152 PISDQ9UG56 409 aa7.27□□□□□ -1.25
BRCA1-214ENST00000477152 DNPEPQ9ULA0 475 aa7.27□□□□□ -1.25
BRCA1-214ENST00000477152 MYO6Q9UM54 1294 aa7.27□□□□□ -1.25
BRCA1-214ENST00000477152 LOXL2Q9Y4K0 774 aa7.27□□□□□ -1.25
BRCA1-214ENST00000477152 SPEGQ15772 3267 aa7.27□□□□□ -1.25
BRCA1-214ENST00000477152 LRRK1Q38SD2 2015 aa7.26□□□□□ -1.25
BRCA1-214ENST00000477152 A0A1W2PQC6 194 aa7.26□□□□□ -1.25
BRCA1-214ENST00000477152 FAM72CH0Y354 149 aa7.26□□□□□ -1.25
BRCA1-214ENST00000477152 RNF103O00237 685 aa7.26□□□□□ -1.25
BRCA1-214ENST00000477152 ATP1A3P13637 1013 aa7.26□□□□□ -1.25
BRCA1-214ENST00000477152 PSMA2P25787 234 aa7.26□□□□□ -1.25
BRCA1-214ENST00000477152 MMP12P39900 470 aa7.26□□□□□ -1.25
BRCA1-214ENST00000477152 ARL4AP40617 200 aa7.26□□□□□ -1.25
BRCA1-214ENST00000477152 SLC7A5Q01650 507 aa7.26□□□□□ -1.25
BRCA1-214ENST00000477152 IL10RBQ08334 325 aa7.26□□□□□ -1.25
BRCA1-214ENST00000477152 TRA2AQ13595 282 aaKnown RBP eCLIP7.26□□□□□ -1.25
BRCA1-214ENST00000477152 ZNF235Q14590 738 aa7.26□□□□□ -1.25
BRCA1-214ENST00000477152 ACOX1Q15067 660 aa7.26□□□□□ -1.25
BRCA1-214ENST00000477152 KRT31Q15323 416 aa7.26□□□□□ -1.25
BRCA1-214ENST00000477152 CYTH1Q15438 398 aa7.26□□□□□ -1.25
BRCA1-214ENST00000477152 FILIP1LQ4L180 1135 aa7.26□□□□□ -1.25
BRCA1-214ENST00000477152 CERCAMQ5T4B2 595 aa7.26□□□□□ -1.25
BRCA1-214ENST00000477152 PHF19Q5T6S3 580 aa7.26□□□□□ -1.25
BRCA1-214ENST00000477152 FAM72AQ5TYM5 149 aa7.26□□□□□ -1.25
BRCA1-214ENST00000477152 ACAD10Q6JQN1 1059 aa7.26□□□□□ -1.25
BRCA1-214ENST00000477152 FAM72DQ6L9T8 149 aa7.26□□□□□ -1.25
BRCA1-214ENST00000477152 DPY19L2P1Q6NXN4 242 aa7.26□□□□□ -1.25
BRCA1-214ENST00000477152 OGFOD3Q6PK18 319 aa7.26□□□□□ -1.25
BRCA1-214ENST00000477152 PHLDB2Q86SQ0 1253 aa7.26□□□□□ -1.25
BRCA1-214ENST00000477152 FAM72BQ86X60 149 aa7.26□□□□□ -1.25
BRCA1-214ENST00000477152 GPR156Q8NFN8 814 aa7.26□□□□□ -1.25
BRCA1-214ENST00000477152 PRR11Q96HE9 360 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-214ENST00000477152 PSMG3-AS1Q96PY0 264 aa7.26□□□□□ -1.25
BRCA1-214ENST00000477152 EFHD1Q9BUP0 239 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms