RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 SLC13A3Q8WWT9 602 aa6.92□□□□□ -1.3
LRCH3-215ENST00000476664 BADQ92934 168 aa6.92□□□□□ -1.3
LRCH3-215ENST00000476664 INTS14Q96SY0 518 aa6.92□□□□□ -1.3
LRCH3-215ENST00000476664 KIF9Q9HAQ2 790 aa6.92□□□□□ -1.3
LRCH3-215ENST00000476664 RANGRFQ9HD47 186 aaPredicted RBP6.92□□□□□ -1.3
LRCH3-215ENST00000476664 PIH1D3Q9NQM4 214 aaKnown RBP6.92□□□□□ -1.3
LRCH3-215ENST00000476664 ENTPD7Q9NQZ7 604 aa6.92□□□□□ -1.3
LRCH3-215ENST00000476664 CNIH4Q9P003 139 aa6.92□□□□□ -1.3
LRCH3-215ENST00000476664 CRNNQ9UBG3 495 aaPredicted RBP6.92□□□□□ -1.3
LRCH3-215ENST00000476664 DDX25Q9UHL0 483 aaKnown RBP6.92□□□□□ -1.3
LRCH3-215ENST00000476664 PLAGL1Q9UM63 463 aa6.92□□□□□ -1.3
LRCH3-215ENST00000476664 EXOC7Q9UPT5 735 aa6.92□□□□□ -1.3
LRCH3-215ENST00000476664 CACNA1HO95180 2353 aa6.92□□□□□ -1.3
LRCH3-215ENST00000476664 ECM29Q5VYK3 1845 aa6.92□□□□□ -1.3
LRCH3-215ENST00000476664 A0A087WV48 116 aa6.91□□□□□ -1.3
LRCH3-215ENST00000476664 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.91□□□□□ -1.3
LRCH3-215ENST00000476664 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.91□□□□□ -1.3
LRCH3-215ENST00000476664 A0A1W2PRX2 142 aa6.91□□□□□ -1.3
LRCH3-215ENST00000476664 CLRN2A0PK11 232 aa6.91□□□□□ -1.3
LRCH3-215ENST00000476664 PEX11AO75192 247 aa6.91□□□□□ -1.3
LRCH3-215ENST00000476664 ONECUT2O95948 504 aa6.91□□□□□ -1.3
LRCH3-215ENST00000476664 ARF4P18085 180 aaPredicted RBP6.91□□□□□ -1.3
LRCH3-215ENST00000476664 GNAT2P19087 354 aa6.91□□□□□ -1.3
LRCH3-215ENST00000476664 TNFRSF8P28908 595 aa6.91□□□□□ -1.3
LRCH3-215ENST00000476664 ADSSP30520 456 aa6.91□□□□□ -1.3
LRCH3-215ENST00000476664 ACAA2P42765 397 aaKnown RBP6.91□□□□□ -1.3
LRCH3-215ENST00000476664 IRAK1P51617 712 aa6.91□□□□□ -1.3
LRCH3-215ENST00000476664 EFNA5P52803 228 aa6.91□□□□□ -1.3
LRCH3-215ENST00000476664 ATXN3P54252 364 aaPredicted RBP6.91□□□□□ -1.3
LRCH3-215ENST00000476664 CASP9P55211 416 aa6.91□□□□□ -1.3
LRCH3-215ENST00000476664 YWHAZP63104 245 aaKnown RBP6.91□□□□□ -1.3
LRCH3-215ENST00000476664 PPIGQ13427 754 aaKnown RBP eCLIP6.91□□□□□ -1.3
LRCH3-215ENST00000476664 KCNC3Q14003 757 aa6.91□□□□□ -1.3
LRCH3-215ENST00000476664 VEPH1Q14D04 833 aa6.91□□□□□ -1.3
LRCH3-215ENST00000476664 RNPS1Q15287 305 aaKnown RBP6.91□□□□□ -1.3
LRCH3-215ENST00000476664 TRADDQ15628 312 aa6.91□□□□□ -1.3
LRCH3-215ENST00000476664 SNAPC1Q16533 368 aa6.91□□□□□ -1.3
LRCH3-215ENST00000476664 CEP55Q53EZ4 464 aa6.91□□□□□ -1.3
LRCH3-215ENST00000476664 PRR31Q5SQ13 230 aa6.91□□□□□ -1.3
LRCH3-215ENST00000476664 KRT39Q6A163 491 aa6.91□□□□□ -1.3
LRCH3-215ENST00000476664 FOXR2Q6PJQ5 311 aa6.91□□□□□ -1.3
LRCH3-215ENST00000476664 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.91□□□□□ -1.3
LRCH3-215ENST00000476664 SLC39A5Q6ZMH5 540 aa6.91□□□□□ -1.3
LRCH3-215ENST00000476664 SPATA21Q7Z572 469 aa6.91□□□□□ -1.3
LRCH3-215ENST00000476664 TMEM200AQ86VY9 491 aa6.91□□□□□ -1.3
LRCH3-215ENST00000476664 DZIP1Q86YF9 867 aaKnown RBP6.91□□□□□ -1.3
LRCH3-215ENST00000476664 HACE1Q8IYU2 909 aa6.91□□□□□ -1.3
LRCH3-215ENST00000476664 FAM109AQ8N4B1 249 aa6.91□□□□□ -1.3
LRCH3-215ENST00000476664 SETD9Q8NE22 299 aa6.91□□□□□ -1.3
LRCH3-215ENST00000476664 GMCL1P1Q8NEA9 526 aa6.91□□□□□ -1.3
LRCH3-215ENST00000476664 RASSF8Q8NHQ8 419 aa6.91□□□□□ -1.3
LRCH3-215ENST00000476664 TBC1D16Q8TBP0 767 aa6.91□□□□□ -1.3
LRCH3-215ENST00000476664 CTNNBL1Q8WYA6 563 aaPredicted RBP6.91□□□□□ -1.3
LRCH3-215ENST00000476664 LPGAT1Q92604 370 aa6.91□□□□□ -1.3
LRCH3-215ENST00000476664 FAM136AQ96C01 138 aa6.91□□□□□ -1.3
LRCH3-215ENST00000476664 HES6Q96HZ4 224 aa6.91□□□□□ -1.3
LRCH3-215ENST00000476664 LINC00615Q96LM1 132 aaPredicted RBP6.91□□□□□ -1.3
LRCH3-215ENST00000476664 ZNF512Q96ME7 567 aaPredicted RBP6.91□□□□□ -1.3
LRCH3-215ENST00000476664 NEK1Q96PY6 1258 aa6.91□□□□□ -1.3
LRCH3-215ENST00000476664 CINPQ9BW66 212 aaPredicted RBP6.91□□□□□ -1.3
LRCH3-215ENST00000476664 GPR88Q9GZN0 384 aa6.91□□□□□ -1.3
LRCH3-215ENST00000476664 AATFQ9NY61 560 aaKnown RBP eCLIP6.91□□□□□ -1.3
LRCH3-215ENST00000476664 CYP39A1Q9NYL5 469 aa6.91□□□□□ -1.3
LRCH3-215ENST00000476664 HAO2Q9NYQ3 351 aa6.91□□□□□ -1.3
LRCH3-215ENST00000476664 SEPT10Q9P0V9 454 aa6.91□□□□□ -1.3
LRCH3-215ENST00000476664 TRPC4Q9UBN4 977 aa6.91□□□□□ -1.3
LRCH3-215ENST00000476664 IL17BQ9UHF5 180 aa6.91□□□□□ -1.3
LRCH3-215ENST00000476664 LAMP5Q9UJQ1 280 aa6.91□□□□□ -1.3
LRCH3-215ENST00000476664 RPH3AQ9Y2J0 694 aaPredicted RBP6.91□□□□□ -1.3
LRCH3-215ENST00000476664 AAR2Q9Y312 384 aaKnown RBP6.91□□□□□ -1.3
LRCH3-215ENST00000476664 ATP8B3O60423 1300 aa6.91□□□□□ -1.3
LRCH3-215ENST00000476664 GVINP1Q7Z2Y8 2422 aa6.91□□□□□ -1.3
LRCH3-215ENST00000476664 AK9Q5TCS8 1911 aa6.91□□□□□ -1.3
LRCH3-215ENST00000476664 NAV2Q8IVL1 2488 aa6.91□□□□□ -1.3
LRCH3-215ENST00000476664 PRRC2BQ5JSZ5 2229 aaKnown RBP6.91□□□□□ -1.3
LRCH3-215ENST00000476664 A0A0G2JMZ2 1700 aa6.9□□□□□ -1.3
LRCH3-215ENST00000476664 SLC9B1P1A6NJY1 282 aa6.9□□□□□ -1.3
LRCH3-215ENST00000476664 FAM86B1E9PN63 330 aa6.9□□□□□ -1.3
LRCH3-215ENST00000476664 RECQL4O94761 1208 aa6.9□□□□□ -1.3
LRCH3-215ENST00000476664 TRUB2O95900 331 aaKnown RBP6.9□□□□□ -1.3
LRCH3-215ENST00000476664 GBAP04062 536 aa6.9□□□□□ -1.3
LRCH3-215ENST00000476664 ALPPP05187 535 aa6.9□□□□□ -1.3
LRCH3-215ENST00000476664 HEXAP06865 529 aa6.9□□□□□ -1.3
LRCH3-215ENST00000476664 ALPPL2P10696 532 aa6.9□□□□□ -1.3
LRCH3-215ENST00000476664 HOXB9P17482 250 aaPredicted RBP6.9□□□□□ -1.3
LRCH3-215ENST00000476664 SKIV2L2P42285 1042 aaKnown RBP6.9□□□□□ -1.3
LRCH3-215ENST00000476664 KCNJ10P78508 379 aa6.9□□□□□ -1.3
LRCH3-215ENST00000476664 DYRK1AQ13627 763 aa6.9□□□□□ -1.3
LRCH3-215ENST00000476664 RIN1Q13671 783 aa6.9□□□□□ -1.3
LRCH3-215ENST00000476664 VGLL4Q14135 290 aa6.9□□□□□ -1.3
LRCH3-215ENST00000476664 FGFBP1Q14512 234 aa6.9□□□□□ -1.3
LRCH3-215ENST00000476664 PDK1Q15118 436 aa6.9□□□□□ -1.3
LRCH3-215ENST00000476664 HFEQ30201 348 aa6.9□□□□□ -1.3
LRCH3-215ENST00000476664 LEXMQ3ZCV2 418 aa6.9□□□□□ -1.3
LRCH3-215ENST00000476664 IRGCQ6NXR0 463 aa6.9□□□□□ -1.3
LRCH3-215ENST00000476664 AADACL2Q6P093 401 aa6.9□□□□□ -1.3
LRCH3-215ENST00000476664 Q6ZNB5 142 aa6.9□□□□□ -1.3
LRCH3-215ENST00000476664 C15orf39Q6ZRI6 1047 aa6.9□□□□□ -1.3
LRCH3-215ENST00000476664 MICALCLQ6ZW33 695 aa6.9□□□□□ -1.3
LRCH3-215ENST00000476664 PLEKHM3Q6ZWE6 761 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms