RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 NADSYN1Q6IA69 706 aa4.91□□□□□ -1.62
PTCD3-211ENST00000476215 ZNF280DQ6N043 979 aa4.91□□□□□ -1.62
PTCD3-211ENST00000476215 FAM122CQ6P4D5 195 aa4.91□□□□□ -1.62
PTCD3-211ENST00000476215 TMED8Q6PL24 325 aaPredicted RBP4.91□□□□□ -1.62
PTCD3-211ENST00000476215 CLEC17AQ6ZS10 378 aa4.91□□□□□ -1.62
PTCD3-211ENST00000476215 SDCCAG8Q86SQ7 713 aaPredicted RBP4.91□□□□□ -1.62
PTCD3-211ENST00000476215 HACE1Q8IYU2 909 aa4.91□□□□□ -1.62
PTCD3-211ENST00000476215 C17orf53Q8N3J3 647 aaPredicted RBP4.91□□□□□ -1.62
PTCD3-211ENST00000476215 OR1J2Q8NGS2 313 aa4.91□□□□□ -1.62
PTCD3-211ENST00000476215 MAGEC3Q8TD91 643 aa4.91□□□□□ -1.62
PTCD3-211ENST00000476215 TANKQ92844 425 aa4.91□□□□□ -1.62
PTCD3-211ENST00000476215 ADGRG7Q96K78 797 aa4.91□□□□□ -1.62
PTCD3-211ENST00000476215 SRSF8Q9BRL6 282 aaKnown RBP4.91□□□□□ -1.62
PTCD3-211ENST00000476215 SMARCAL1Q9NZC9 954 aa4.91□□□□□ -1.62
PTCD3-211ENST00000476215 MALT1Q9UDY8 824 aa4.91□□□□□ -1.62
PTCD3-211ENST00000476215 STK39Q9UEW8 545 aa4.91□□□□□ -1.62
PTCD3-211ENST00000476215 SIX4Q9UIU6 781 aa4.91□□□□□ -1.62
PTCD3-211ENST00000476215 ACSL5Q9ULC5 683 aa4.91□□□□□ -1.62
PTCD3-211ENST00000476215 NENFQ9UMX5 172 aa4.91□□□□□ -1.62
PTCD3-211ENST00000476215 hCG_1807616A0A1W2PRN6 198 aa4.9□□□□□ -1.63
PTCD3-211ENST00000476215 SRRM3A6NNA2 597 aaPredicted RBP4.9□□□□□ -1.63
PTCD3-211ENST00000476215 DAB1O75553 588 aa4.9□□□□□ -1.63
PTCD3-211ENST00000476215 TSPAN9O75954 239 aa4.9□□□□□ -1.63
PTCD3-211ENST00000476215 TPPPO94811 219 aa4.9□□□□□ -1.63
PTCD3-211ENST00000476215 KCNK5O95279 499 aa4.9□□□□□ -1.63
PTCD3-211ENST00000476215 ZBTB11O95625 1053 aaPredicted RBP4.9□□□□□ -1.63
PTCD3-211ENST00000476215 AFPP02771 609 aaKnown RBP4.9□□□□□ -1.63
PTCD3-211ENST00000476215 HIST1H2ABP04908 130 aa4.9□□□□□ -1.63
PTCD3-211ENST00000476215 ICAM1P05362 532 aa4.9□□□□□ -1.63
PTCD3-211ENST00000476215 ACTN1P12814 892 aa4.9□□□□□ -1.63
PTCD3-211ENST00000476215 HIST1H2ADP20671 130 aa4.9□□□□□ -1.63
PTCD3-211ENST00000476215 KIF5AQ12840 1032 aa4.9□□□□□ -1.63
PTCD3-211ENST00000476215 ZNF155Q12901 538 aaPredicted RBP4.9□□□□□ -1.63
PTCD3-211ENST00000476215 CHAF1BQ13112 559 aa4.9□□□□□ -1.63
PTCD3-211ENST00000476215 AIMP2Q13155 320 aaKnown RBP4.9□□□□□ -1.63
PTCD3-211ENST00000476215 TNFAIP1Q13829 316 aa4.9□□□□□ -1.63
PTCD3-211ENST00000476215 IRF3Q14653 427 aa4.9□□□□□ -1.63
PTCD3-211ENST00000476215 KIAA1161Q6NSJ0 714 aa4.9□□□□□ -1.63
PTCD3-211ENST00000476215 CFAP77Q6ZQR2 320 aa4.9□□□□□ -1.63
PTCD3-211ENST00000476215 HIST3H2AQ7L7L0 130 aa4.9□□□□□ -1.63
PTCD3-211ENST00000476215 SMRP1Q8NCR6 262 aa4.9□□□□□ -1.63
PTCD3-211ENST00000476215 HMGCLL1Q8TB92 370 aa4.9□□□□□ -1.63
PTCD3-211ENST00000476215 NSUN4Q96CB9 384 aaKnown RBP4.9□□□□□ -1.63
PTCD3-211ENST00000476215 RHBDF1Q96CC6 855 aa4.9□□□□□ -1.63
PTCD3-211ENST00000476215 EGLN2Q96KS0 407 aa4.9□□□□□ -1.63
PTCD3-211ENST00000476215 GAD1Q99259 594 aa4.9□□□□□ -1.63
PTCD3-211ENST00000476215 MTERF1Q99551 399 aaKnown RBP4.9□□□□□ -1.63
PTCD3-211ENST00000476215 PCDH9Q9HC56 1237 aa4.9□□□□□ -1.63
PTCD3-211ENST00000476215 CD93Q9NPY3 652 aa4.9□□□□□ -1.63
PTCD3-211ENST00000476215 MTMR10Q9NXD2 777 aa4.9□□□□□ -1.63
PTCD3-211ENST00000476215 MCM9Q9NXL9 1143 aa4.9□□□□□ -1.63
PTCD3-211ENST00000476215 NSMCE4AQ9NXX6 385 aa4.9□□□□□ -1.63
PTCD3-211ENST00000476215 ZNF224Q9NZL3 707 aa4.9□□□□□ -1.63
PTCD3-211ENST00000476215 SELENONQ9NZV5 590 aa4.9□□□□□ -1.63
PTCD3-211ENST00000476215 KCNS2Q9ULS6 477 aa4.9□□□□□ -1.63
PTCD3-211ENST00000476215 KANSL1LA0AUZ9 987 aa4.89□□□□□ -1.63
PTCD3-211ENST00000476215 EIF4E1BA6NMX2 242 aaKnown RBP4.89□□□□□ -1.63
PTCD3-211ENST00000476215 HS3ST1O14792 307 aa4.89□□□□□ -1.63
PTCD3-211ENST00000476215 MID1O15344 667 aa4.89□□□□□ -1.63
PTCD3-211ENST00000476215 OGG1O15527 345 aa4.89□□□□□ -1.63
PTCD3-211ENST00000476215 PMS2P2O95744 297 aa4.89□□□□□ -1.63
PTCD3-211ENST00000476215 LINC00271P0C7V0 271 aa4.89□□□□□ -1.63
PTCD3-211ENST00000476215 CSH1P0DML2 217 aa4.89□□□□□ -1.63
PTCD3-211ENST00000476215 CSH2P0DML3 217 aa4.89□□□□□ -1.63
PTCD3-211ENST00000476215 DAOP14920 347 aa4.89□□□□□ -1.63
PTCD3-211ENST00000476215 GCH1P30793 250 aa4.89□□□□□ -1.63
PTCD3-211ENST00000476215 ART1P52961 327 aa4.89□□□□□ -1.63
PTCD3-211ENST00000476215 SNX16P57768 344 aa4.89□□□□□ -1.63
PTCD3-211ENST00000476215 TAS2R38P59533 333 aa4.89□□□□□ -1.63
PTCD3-211ENST00000476215 PDE1BQ01064 536 aa4.89□□□□□ -1.63
PTCD3-211ENST00000476215 SNTA1Q13424 505 aa4.89□□□□□ -1.63
PTCD3-211ENST00000476215 ACVR2BQ13705 512 aa4.89□□□□□ -1.63
PTCD3-211ENST00000476215 KEAP1Q14145 624 aa4.89□□□□□ -1.63
PTCD3-211ENST00000476215 DECR1Q16698 335 aa4.89□□□□□ -1.63
PTCD3-211ENST00000476215 CLEC4GQ6UXB4 293 aa4.89□□□□□ -1.63
PTCD3-211ENST00000476215 TSPAN33Q86UF1 283 aa4.89□□□□□ -1.63
PTCD3-211ENST00000476215 ZNF34Q8IZ26 560 aa4.89□□□□□ -1.63
PTCD3-211ENST00000476215 LILRB1Q8NHL6 650 aaPredicted RBP4.89□□□□□ -1.63
PTCD3-211ENST00000476215 HM13Q8TCT9 377 aa4.89□□□□□ -1.63
PTCD3-211ENST00000476215 DUSP19Q8WTR2 217 aa4.89□□□□□ -1.63
PTCD3-211ENST00000476215 MOAP1Q96BY2 351 aa4.89□□□□□ -1.63
PTCD3-211ENST00000476215 SAT2Q96F10 170 aaPredicted RBP4.89□□□□□ -1.63
PTCD3-211ENST00000476215 TMEM19Q96HH6 336 aa4.89□□□□□ -1.63
PTCD3-211ENST00000476215 NUDCD1Q96RS6 583 aa4.89□□□□□ -1.63
PTCD3-211ENST00000476215 MEIS3Q99687 375 aa4.89□□□□□ -1.63
PTCD3-211ENST00000476215 SIL1Q9H173 461 aa4.89□□□□□ -1.63
PTCD3-211ENST00000476215 TMX4Q9H1E5 349 aaPredicted RBP4.89□□□□□ -1.63
PTCD3-211ENST00000476215 CCDC68Q9H2F9 335 aa4.89□□□□□ -1.63
PTCD3-211ENST00000476215 C6orf106Q9H6K1 298 aaPredicted RBP4.89□□□□□ -1.63
PTCD3-211ENST00000476215 EPB41L5Q9HCM4 733 aa4.89□□□□□ -1.63
PTCD3-211ENST00000476215 UBA2Q9UBT2 640 aaPredicted RBP4.89□□□□□ -1.63
PTCD3-211ENST00000476215 CMAHPQ9Y471 501 aa4.89□□□□□ -1.63
PTCD3-211ENST00000476215 TAF1P21675 1872 aa4.89□□□□□ -1.63
PTCD3-211ENST00000476215 MYO15BQ96JP2 1530 aa4.88□□□□□ -1.63
PTCD3-211ENST00000476215 A0A1W2PQ09 198 aa4.88□□□□□ -1.63
PTCD3-211ENST00000476215 CDRT15L2A8MXV6 281 aa4.88□□□□□ -1.63
PTCD3-211ENST00000476215 B4DLN1 442 aa4.88□□□□□ -1.63
PTCD3-211ENST00000476215 GJB3O75712 270 aa4.88□□□□□ -1.63
PTCD3-211ENST00000476215 DDNO94850 711 aaPredicted RBP4.88□□□□□ -1.63
PTCD3-211ENST00000476215 PORP16435 677 aaPredicted RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms